Click here to switch to the map view.

The map label for this gene is yfbE [C]

Identifier: 159041606

GI number: 159041606

Start: 1089864

End: 1091048

Strand: Reverse

Name: yfbE [C]

Synonym: Cmaq_1039

Alternate gene names: 159041606

Gene position: 1091048-1089864 (Counterclockwise)

Preceding gene: 159041609

Following gene: 159041605

Centisome position: 52.52

GC content: 48.02

Gene sequence:

>1185_bases
ATGCATGAGGCTAAGAGGACGCTTAGATTCAGGCCCTGGATAACCGAGGAGGATACTAAGGCTGTTGTGGATGCATTAAT
GAGCGGTAACCTGGTTTCACCATACGGTAAGTACGGTAAACTGCTTGAGGAGGAGTTAACCAAGTACCTTAATACTAGGC
ACGCGTTAGCGGTCTCAAGTGGAACAACGGCCCTTCACCTAGCCTTAAGGGCGATTGGGGTTGGGCCTGGTGATGAGGTT
ATTGTACCGGCATTCACCTTCCTAGCAACCGCATCAGCTGTACTGCACTCCAACGCTGTACCAGTGTTCGCAGACATCTC
CCTTGAAACCCTGGGCCTTGATTCAAGTAGTGTTGAGTCTAAGATTAGTGATAGGACTAGGGCAATAATAGTGGTTCACA
TGGCTGGTATGCCCGCTGAAATGGATGAATTAATTAAGGTTGCTAAGGAGCATAACCTATACCTAATTGAGGACACTGCC
CAAGCCCTTGGTGCAGTCTACCGTGGTGTTAAGGCTGGGGCCCTGGGGGATTTGGGTACATTCAGCTTCTACCCAACCAA
GACAATAACCAGTAGTGAGGGGGGTGCTGTATCCACTAACTCCAGTGAATTGGCTAATAGGGTTAGGTTACTTAGGAGCC
ATGGGGAAACAGGGAAGTACTACTACGAGGAGTTGGGTTACAATTACAGGATGGGTGAATTGCAGGCAGCCTTAGCCTAC
TCCCAACTCCTCAGGGTGGAGGAGATTATTAGGAGGAAGGAGGCCTTCGCCAAGACCCTTACAGAGGAGTTAAGTAGATT
AGATAACGACTTACTGATTCTACCTAAACCCAAGCCCTATGTTAGGCATGCCTGGCACATTTACCAAATCCTATTAACCA
GTAGGGTTAAGGCGCCTAGGGATAAGGTGGTTGAGGAGCTTAAGGCTAAGGGTATTGAGGCGGTGACTGTAGCCTACCCC
ATACCGTTATACAGGACTCCATTATTCATTAATAAGATTGGGTACGGTAAGGGTTGCCCATGGTCATGCCCATTCTATGG
TAGGGAGGTTAAGTATGAACCATTACCCAACACTGAGGAGGCTACTAGGAGGATATTCGGTATCTTGATATCACCATACT
TCACGGAGGATGATGCGGTGTACGCGGCTAAGGTGATTAAGGATACATTAATGGCGTTAAGTTGA

Upstream 100 bases:

>100_bases
CCATAACGTAGGCTTAAAGCCTAGACTTAATAATTATTTTTCTAATGAATTAATGAGAAGCTTGAATACTAGTTTAAAAA
CCCATACCCAGTAGTGACAC

Downstream 100 bases:

>100_bases
CTTAATTACGTGGAAAACATTAGGAATCAGGAACTTAGTGAATTATGATTAGGCTGTGGTGAATTAAAAGTTAAGGTTCA
TACCGGTGTTATGGCACGTG

Product: glutamine--scyllo-inositol transaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MHEAKRTLRFRPWITEEDTKAVVDALMSGNLVSPYGKYGKLLEEELTKYLNTRHALAVSSGTTALHLALRAIGVGPGDEV
IVPAFTFLATASAVLHSNAVPVFADISLETLGLDSSSVESKISDRTRAIIVVHMAGMPAEMDELIKVAKEHNLYLIEDTA
QALGAVYRGVKAGALGDLGTFSFYPTKTITSSEGGAVSTNSSELANRVRLLRSHGETGKYYYEELGYNYRMGELQAALAY
SQLLRVEEIIRRKEAFAKTLTEELSRLDNDLLILPKPKPYVRHAWHIYQILLTSRVKAPRDKVVEELKAKGIEAVTVAYP
IPLYRTPLFINKIGYGKGCPWSCPFYGREVKYEPLPNTEEATRRIFGILISPYFTEDDAVYAAKVIKDTLMALS

Sequences:

>Translated_394_residues
MHEAKRTLRFRPWITEEDTKAVVDALMSGNLVSPYGKYGKLLEEELTKYLNTRHALAVSSGTTALHLALRAIGVGPGDEV
IVPAFTFLATASAVLHSNAVPVFADISLETLGLDSSSVESKISDRTRAIIVVHMAGMPAEMDELIKVAKEHNLYLIEDTA
QALGAVYRGVKAGALGDLGTFSFYPTKTITSSEGGAVSTNSSELANRVRLLRSHGETGKYYYEELGYNYRMGELQAALAY
SQLLRVEEIIRRKEAFAKTLTEELSRLDNDLLILPKPKPYVRHAWHIYQILLTSRVKAPRDKVVEELKAKGIEAVTVAYP
IPLYRTPLFINKIGYGKGCPWSCPFYGREVKYEPLPNTEEATRRIFGILISPYFTEDDAVYAAKVIKDTLMALS
>Mature_394_residues
MHEAKRTLRFRPWITEEDTKAVVDALMSGNLVSPYGKYGKLLEEELTKYLNTRHALAVSSGTTALHLALRAIGVGPGDEV
IVPAFTFLATASAVLHSNAVPVFADISLETLGLDSSSVESKISDRTRAIIVVHMAGMPAEMDELIKVAKEHNLYLIEDTA
QALGAVYRGVKAGALGDLGTFSFYPTKTITSSEGGAVSTNSSELANRVRLLRSHGETGKYYYEELGYNYRMGELQAALAY
SQLLRVEEIIRRKEAFAKTLTEELSRLDNDLLILPKPKPYVRHAWHIYQILLTSRVKAPRDKVVEELKAKGIEAVTVAYP
IPLYRTPLFINKIGYGKGCPWSCPFYGREVKYEPLPNTEEATRRIFGILISPYFTEDDAVYAAKVIKDTLMALS

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=382, Percent_Identity=32.7225130890052, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI2367285, Length=315, Percent_Identity=33.3333333333333, Blast_Score=165, Evalue=4e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 43711; Mature: 43711

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEAKRTLRFRPWITEEDTKAVVDALMSGNLVSPYGKYGKLLEEELTKYLNTRHALAVSS
CCCHHHCEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEECC
GTTALHLALRAIGVGPGDEVIVPAFTFLATASAVLHSNAVPVFADISLETLGLDSSSVES
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCCCHHHHH
KISDRTRAIIVVHMAGMPAEMDELIKVAKEHNLYLIEDTAQALGAVYRGVKAGALGDLGT
HHHCCCEEEEEEEECCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCCCCCCCCCCC
FSFYPTKTITSSEGGAVSTNSSELANRVRLLRSHGETGKYYYEELGYNYRMGELQAALAY
CCCCCCCEEECCCCCEECCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHH
SQLLRVEEIIRRKEAFAKTLTEELSRLDNDLLILPKPKPYVRHAWHIYQILLTSRVKAPR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCH
DKVVEELKAKGIEAVTVAYPIPLYRTPLFINKIGYGKGCPWSCPFYGREVKYEPLPNTEE
HHHHHHHHHCCCEEEEEEECCCHHCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCHHH
ATRRIFGILISPYFTEDDAVYAAKVIKDTLMALS
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHEAKRTLRFRPWITEEDTKAVVDALMSGNLVSPYGKYGKLLEEELTKYLNTRHALAVSS
CCCHHHCEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEECC
GTTALHLALRAIGVGPGDEVIVPAFTFLATASAVLHSNAVPVFADISLETLGLDSSSVES
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCCCHHHHH
KISDRTRAIIVVHMAGMPAEMDELIKVAKEHNLYLIEDTAQALGAVYRGVKAGALGDLGT
HHHCCCEEEEEEEECCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCCCCCCCCCCC
FSFYPTKTITSSEGGAVSTNSSELANRVRLLRSHGETGKYYYEELGYNYRMGELQAALAY
CCCCCCCEEECCCCCEECCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHH
SQLLRVEEIIRRKEAFAKTLTEELSRLDNDLLILPKPKPYVRHAWHIYQILLTSRVKAPR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCH
DKVVEELKAKGIEAVTVAYPIPLYRTPLFINKIGYGKGCPWSCPFYGREVKYEPLPNTEE
HHHHHHHHHCCCEEEEEEECCCHHCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCHHH
ATRRIFGILISPYFTEDDAVYAAKVIKDTLMALS
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]