| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041532
Identifier: 159041532
GI number: 159041532
Start: 1009334
End: 1009702
Strand: Reverse
Name: 159041532
Synonym: Cmaq_0962
Alternate gene names: NA
Gene position: 1009702-1009334 (Counterclockwise)
Preceding gene: 159041538
Following gene: 159041531
Centisome position: 48.6
GC content: 36.31
Gene sequence:
>369_bases GTGGCTGCACGTTCTTTGGTCAATTACATTAGGTATTGTGAGGATGAGGATTGTATTAAAGGTCAATTGGCTATACTTAC TAGAGGTAGGAGGGAGGTACCTATTGAGGTTAATGGTTTAAGGTTCCTAATTGATGTAGTTGCTAATGATGAGGCCTTTG AGGTTAAGTACGATGCGCAACCATACGATGGGATTGGGCAAGCATTAATATACTTAACCATAGGGTATAAAACATGGTTA ATACATGTCTTAGATAAGTACTCGAGGTTATTTAAGAATTATGTTGAATTATTCAGGAGACTTAATTTACCATTCTGTAT TGAAGTAATAGATAAAAGACTTGGCCTTAGTGAGAAAATATGCCCGTAA
Upstream 100 bases:
>100_bases TAATGTTGCAATAATTAAGAACACTTATATCACTATTAAGTAATAATGTAACCTAATGCTTACTCGTAGTATTTATAAAT AAAGTAATGGTGAAAATTAA
Downstream 100 bases:
>100_bases TAATACCTGTAGTGTCAGCGTCCGGTGGTGTAGGTAAGACAACCATAACGCTATTAATAGCCCATTATCTCGTTGAATAT GGGGAAGATCCAGGGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MAARSLVNYIRYCEDEDCIKGQLAILTRGRREVPIEVNGLRFLIDVVANDEAFEVKYDAQPYDGIGQALIYLTIGYKTWL IHVLDKYSRLFKNYVELFRRLNLPFCIEVIDKRLGLSEKICP
Sequences:
>Translated_122_residues MAARSLVNYIRYCEDEDCIKGQLAILTRGRREVPIEVNGLRFLIDVVANDEAFEVKYDAQPYDGIGQALIYLTIGYKTWL IHVLDKYSRLFKNYVELFRRLNLPFCIEVIDKRLGLSEKICP >Mature_121_residues AARSLVNYIRYCEDEDCIKGQLAILTRGRREVPIEVNGLRFLIDVVANDEAFEVKYDAQPYDGIGQALIYLTIGYKTWLI HVLDKYSRLFKNYVELFRRLNLPFCIEVIDKRLGLSEKICP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14221; Mature: 14090
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARSLVNYIRYCEDEDCIKGQLAILTRGRREVPIEVNGLRFLIDVVANDEAFEVKYDAQ CCHHHHHHHHHHCCCCCHHCCHHHEEECCCCCCCEEECCCEEEEHHHCCCCEEEEEECCC PYDGIGQALIYLTIGYKTWLIHVLDKYSRLFKNYVELFRRLNLPFCIEVIDKRLGLSEKI CCCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC CP CC >Mature Secondary Structure AARSLVNYIRYCEDEDCIKGQLAILTRGRREVPIEVNGLRFLIDVVANDEAFEVKYDAQ CHHHHHHHHHHCCCCCHHCCHHHEEECCCCCCCEEECCCEEEEHHHCCCCEEEEEECCC PYDGIGQALIYLTIGYKTWLIHVLDKYSRLFKNYVELFRRLNLPFCIEVIDKRLGLSEKI CCCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC CP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA