| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041531
Identifier: 159041531
GI number: 159041531
Start: 1008399
End: 1009343
Strand: Reverse
Name: 159041531
Synonym: Cmaq_0961
Alternate gene names: NA
Gene position: 1009343-1008399 (Counterclockwise)
Preceding gene: 159041532
Following gene: 159041529
Centisome position: 48.58
GC content: 38.73
Gene sequence:
>945_bases ATGCCCGTAATAATACCTGTAGTGTCAGCGTCCGGTGGTGTAGGTAAGACAACCATAACGCTATTAATAGCCCATTATCT CGTTGAATATGGGGAAGATCCAGGGAAAATACTCATAATTGACACGGATCCAACTGCTGGTTTATCGCTTAAAATATATG GGGATGATTACGATAGGATTAATCAACTTAGGAGGACACTATATCATATGTTTAAGGATTATGATAAGGGCAAAAATATT GATATTGATGATTACGTAAATCCACCTAACGGTAATATTGATGCAAACACACTCCAGAATGTGAAAGTATTACCACCTGG TGAAGATGATGAAGGTGACCTCAGTAACCTAGTGACACTGTGGCTGGGTGAGTACGGTAGGGGTGATGCATTATTCACTA TTCTTAGTAAATCAGGCGCATTAAGCCGCTTCAATTACATAATTATAGATACCGCCCCATTCTTTGATAAAAGATATACC TCAATAGCGCTGGCTATGACTGATTTAGCTAAGGTTAATAAGGCAGTCGTACCGCTGAGACCTACTTTAACTGATATTAA GAGGACTATTAGGATGACTCAAACAATTTCAAGGAAGATTAATAATGAGATTAAGCCAATATTCGTCTTCAATTTCGATA AAGACATGTTAAGAAGTGAGGCAGCGGCACTTAGGGAGGCTGGCATAGAAGTATTATCAAAAGGTTCTAGGGAGGCAAGG GGCGCTAAGCCCCCTGGTGAAGTGGTAAAGGCTGTTAATGACCTTAAATCAACCGGTAAGATAATTAATGTAGCCTTAGC CTACATGGCTTCATTAACCAGATTCCCAGAGAAGTGGCTTAAGGATGTGGAATCATATACGCCTAAATGCGTAATATCAT CAATAATAAATGAATTTAATGAAAATATTAAACCAGAGTGCTCCATATTAGTTGAAACAGAATGA
Upstream 100 bases:
>100_bases ACTCGAGGTTATTTAAGAATTATGTTGAATTATTCAGGAGACTTAATTTACCATTCTGTATTGAAGTAATAGATAAAAGA CTTGGCCTTAGTGAGAAAAT
Downstream 100 bases:
>100_bases CTCAGTAAGCATAGCCTAGGCCTTAGAACCTTCACTAGTATTACCGCTTAACCACATTTCAATCACCCCATCCGGTATTG TTAAGTCACCTCTGAAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPVIIPVVSASGGVGKTTITLLIAHYLVEYGEDPGKILIIDTDPTAGLSLKIYGDDYDRINQLRRTLYHMFKDYDKGKNI DIDDYVNPPNGNIDANTLQNVKVLPPGEDDEGDLSNLVTLWLGEYGRGDALFTILSKSGALSRFNYIIIDTAPFFDKRYT SIALAMTDLAKVNKAVVPLRPTLTDIKRTIRMTQTISRKINNEIKPIFVFNFDKDMLRSEAAALREAGIEVLSKGSREAR GAKPPGEVVKAVNDLKSTGKIINVALAYMASLTRFPEKWLKDVESYTPKCVISSIINEFNENIKPECSILVETE
Sequences:
>Translated_314_residues MPVIIPVVSASGGVGKTTITLLIAHYLVEYGEDPGKILIIDTDPTAGLSLKIYGDDYDRINQLRRTLYHMFKDYDKGKNI DIDDYVNPPNGNIDANTLQNVKVLPPGEDDEGDLSNLVTLWLGEYGRGDALFTILSKSGALSRFNYIIIDTAPFFDKRYT SIALAMTDLAKVNKAVVPLRPTLTDIKRTIRMTQTISRKINNEIKPIFVFNFDKDMLRSEAAALREAGIEVLSKGSREAR GAKPPGEVVKAVNDLKSTGKIINVALAYMASLTRFPEKWLKDVESYTPKCVISSIINEFNENIKPECSILVETE >Mature_313_residues PVIIPVVSASGGVGKTTITLLIAHYLVEYGEDPGKILIIDTDPTAGLSLKIYGDDYDRINQLRRTLYHMFKDYDKGKNID IDDYVNPPNGNIDANTLQNVKVLPPGEDDEGDLSNLVTLWLGEYGRGDALFTILSKSGALSRFNYIIIDTAPFFDKRYTS IALAMTDLAKVNKAVVPLRPTLTDIKRTIRMTQTISRKINNEIKPIFVFNFDKDMLRSEAAALREAGIEVLSKGSREARG AKPPGEVVKAVNDLKSTGKIINVALAYMASLTRFPEKWLKDVESYTPKCVISSIINEFNENIKPECSILVETE
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34879; Mature: 34747
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVIIPVVSASGGVGKTTITLLIAHYLVEYGEDPGKILIIDTDPTAGLSLKIYGDDYDRI CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCHHHH NQLRRTLYHMFKDYDKGKNIDIDDYVNPPNGNIDANTLQNVKVLPPGEDDEGDLSNLVTL HHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHH WLGEYGRGDALFTILSKSGALSRFNYIIIDTAPFFDKRYTSIALAMTDLAKVNKAVVPLR HHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCC PTLTDIKRTIRMTQTISRKINNEIKPIFVFNFDKDMLRSEAAALREAGIEVLSKGSREAR CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC GAKPPGEVVKAVNDLKSTGKIINVALAYMASLTRFPEKWLKDVESYTPKCVISSIINEFN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ENIKPECSILVETE CCCCCCEEEEEECC >Mature Secondary Structure PVIIPVVSASGGVGKTTITLLIAHYLVEYGEDPGKILIIDTDPTAGLSLKIYGDDYDRI CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCHHHH NQLRRTLYHMFKDYDKGKNIDIDDYVNPPNGNIDANTLQNVKVLPPGEDDEGDLSNLVTL HHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHH WLGEYGRGDALFTILSKSGALSRFNYIIIDTAPFFDKRYTSIALAMTDLAKVNKAVVPLR HHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCC PTLTDIKRTIRMTQTISRKINNEIKPIFVFNFDKDMLRSEAAALREAGIEVLSKGSREAR CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC GAKPPGEVVKAVNDLKSTGKIINVALAYMASLTRFPEKWLKDVESYTPKCVISSIINEFN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ENIKPECSILVETE CCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA