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The map label for this gene is 159041415

Identifier: 159041415

GI number: 159041415

Start: 886535

End: 887125

Strand: Reverse

Name: 159041415

Synonym: Cmaq_0842

Alternate gene names: NA

Gene position: 887125-886535 (Counterclockwise)

Preceding gene: 159041416

Following gene: 159041414

Centisome position: 42.7

GC content: 43.99

Gene sequence:

>591_bases
ATGGATGAGAAGCTGTTACCTCCAGGGGAGGTATGCAGACGGCTGGGTATTCATTATGTTACTTTGAAGAGGTGGATTTA
TTCTAGTAGGATAAGGGCTGTTAGAACTCCTAGTGGTAGATGGATGATACCTGAGAGTGAAATAGAGAAAATCATTAGTG
GAGAGGTAGAGGCAAAGGAGGTTAAAGCCATTATCTATGCTCGCGTTAGCTCTTCAGACCAGAGGAACGATCTAGAGAGA
CAGATTCAGTACCTCACCCAGTACTGTTCTGCTAAAGGGTATGAGATTGTGGATGTTCTAAGAGATGTAGCCAGTGGTCT
CAGGACCAATCGTAGAGATTTATTGAAGCTCTTCAACTACGTTGTTAATGGGCAAGTAGATGTTGTAGTCGTAACCTATA
AGGACAGACTCACTGGATTTGGGTTTGAATACCTAGGATACTTCTTCAAGCAGTACGGTGTTGGGATAGAGGTTGCCTAT
GGCGAAGAACCTAAATTCACCGGCAAACTCTACGGTATGAGAAGCCGTAGAAGAAAGAAGCTTATTGGGGGCTTCAGGAA
AGTCCTAGAGGAGGTTGAGGAAAATGGTTAG

Upstream 100 bases:

>100_bases
TTTTTAAGGAGCTAGTGACTGAATTAAGTAGAGAATGCTCAAGAGGGGCAGAAACGTTTAAATATAACAATTCATAATAT
TTTATAGTAGATTGAAGTAT

Downstream 100 bases:

>100_bases
GGTGGCAAGGACTGTTATTGTTAGGAGTGTTAGGTTACCTAGGGGTGTGTTTAGGGTGTTTATTGAGCTTGAGGATGTGT
ACCGTAGTATTGTAGAGCAG

Product: resolvase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MDEKLLPPGEVCRRLGIHYVTLKRWIYSSRIRAVRTPSGRWMIPESEIEKIISGEVEAKEVKAIIYARVSSSDQRNDLER
QIQYLTQYCSAKGYEIVDVLRDVASGLRTNRRDLLKLFNYVVNGQVDVVVVTYKDRLTGFGFEYLGYFFKQYGVGIEVAY
GEEPKFTGKLYGMRSRRRKKLIGGFRKVLEEVEENG

Sequences:

>Translated_196_residues
MDEKLLPPGEVCRRLGIHYVTLKRWIYSSRIRAVRTPSGRWMIPESEIEKIISGEVEAKEVKAIIYARVSSSDQRNDLER
QIQYLTQYCSAKGYEIVDVLRDVASGLRTNRRDLLKLFNYVVNGQVDVVVVTYKDRLTGFGFEYLGYFFKQYGVGIEVAY
GEEPKFTGKLYGMRSRRRKKLIGGFRKVLEEVEENG
>Mature_196_residues
MDEKLLPPGEVCRRLGIHYVTLKRWIYSSRIRAVRTPSGRWMIPESEIEKIISGEVEAKEVKAIIYARVSSSDQRNDLER
QIQYLTQYCSAKGYEIVDVLRDVASGLRTNRRDLLKLFNYVVNGQVDVVVVTYKDRLTGFGFEYLGYFFKQYGVGIEVAY
GEEPKFTGKLYGMRSRRRKKLIGGFRKVLEEVEENG

Specific function: Unknown

COG id: COG2452

COG function: function code L; Predicted site-specific integrase-resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 22722; Mature: 22722

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKLLPPGEVCRRLGIHYVTLKRWIYSSRIRAVRTPSGRWMIPESEIEKIISGEVEAKE
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCEECCHHHHHHHHCCCCHHHH
VKAIIYARVSSSDQRNDLERQIQYLTQYCSAKGYEIVDVLRDVASGLRTNRRDLLKLFNY
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
VVNGQVDVVVVTYKDRLTGFGFEYLGYFFKQYGVGIEVAYGEEPKFTGKLYGMRSRRRKK
HHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHH
LIGGFRKVLEEVEENG
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDEKLLPPGEVCRRLGIHYVTLKRWIYSSRIRAVRTPSGRWMIPESEIEKIISGEVEAKE
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCEECCHHHHHHHHCCCCHHHH
VKAIIYARVSSSDQRNDLERQIQYLTQYCSAKGYEIVDVLRDVASGLRTNRRDLLKLFNY
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
VVNGQVDVVVVTYKDRLTGFGFEYLGYFFKQYGVGIEVAYGEEPKFTGKLYGMRSRRRKK
HHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHH
LIGGFRKVLEEVEENG
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]