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The map label for this gene is 159041414

Identifier: 159041414

GI number: 159041414

Start: 885247

End: 886542

Strand: Reverse

Name: 159041414

Synonym: Cmaq_0841

Alternate gene names: NA

Gene position: 886542-885247 (Counterclockwise)

Preceding gene: 159041415

Following gene: 159041413

Centisome position: 42.67

GC content: 49.61

Gene sequence:

>1296_bases
ATGGTTAGGGTGGCAAGGACTGTTATTGTTAGGAGTGTTAGGTTACCTAGGGGTGTGTTTAGGGTGTTTATTGAGCTTGA
GGATGTGTACCGTAGTATTGTAGAGCAGTTAACCATGTACGCAGTGGCGAATAACATTAGAAGCTTCACTAGGTTAAGGG
CGCTTAAATACCATGAAATGAGGAATCTCCACCCACAATTACCCTCACACTACGTATATACAGCATGCCAGGATGCTAGC
GCTAGGGCTAAAAGCTTCATGAGACTAAGGAAGCTGGGGCTTGCCGGGAAGAATTACCCAGAGGTTAAATCAGTCTCCAT
ATGGCTTGATGACCACCTATGGAGGCCCAATGGCTATACCTCAATAGAGGTGGCGACTCACGAGGGGTGGGTTAGGGTGG
GGATTGAGCCGCATAGGCAATACTGGAGGTACATTAACGGTGGGTGGAGGCTAGCAAGCGAGGCTAGGGTGAGGCTGGAT
AGGAGGAATAGGTGGTTGATAATCTATTTTACATTCACCAAGGAGGTTGAGGAATATAAACCAAAGGACTTCATACCTGT
TGATGTCAATGAGAATAACGTCACCGTACTTATTGATGGCGCAGCATACCTCCTGGAGACGAATATCGAGAAGCTCACAC
TAGGTTATTACTACCGCAGGAGGAGTGTGCAGGAGAAGTATGATAAGGTGTATGGTGTCGAGTCTAGAGTTAAGAGGAGG
GTTTTGAGGAAGCTCAAGGAAAGGAGGAAGAAGGATGATATTAGGTGGAAGATAGCCCACCTCATAGTTAAAGCCGCCGG
GGAGAGGCGGTACGGTATTGTTCTTGAGAGGCTTGGTAGGAAACCAGCTGGTAGTATGATCTCCAGGATTAAGGATAAGC
AATTGAGGCACAGGATATACCAGGCAGCATTTAGAGGAATCCAAAGGGTGATTGAGGAGAAGGCGAGGGAGTACGGTGTA
CCCGTGGTCTACGTAAACCCAAGTAACACATCAAAAATGTGCCCAGTGCACAAAGCCCCAATAACCTATAATGACTCAAG
AATTGGGGAGTGTAGCAGTGGGGGTGAATTATGGCACCGCGACGTTACCGCCACCTGGAACCTCCTCATAAGGGCCCGCC
AGGGCGATGGGAGCAGTGCTCCAAGCCCCGGCGGACTCCCCCACATAGATGGGAGCCCAGTGCCGTTGGGCTCGACAGCC
ACCCATGACCCCATAACCCTACCAAAAGGGTTATGGGCGAGGCGGAACTCCCTACCACCGAACGAAACTGTAGGGAGAAA
CGGTGGTTTCAATTAA

Upstream 100 bases:

>100_bases
GAAGAACCTAAATTCACCGGCAAACTCTACGGTATGAGAAGCCGTAGAAGAAAGAAGCTTATTGGGGGCTTCAGGAAAGT
CCTAGAGGAGGTTGAGGAAA

Downstream 100 bases:

>100_bases
CACTGAATTATTAATAATTGGGGGTGGACCGGCTGGTTCATTCCTAGCAAGTGAGGTTAACCTGGGTGATGTTACTTTAT
TAGACAAGAAGAAGATTAAC

Product: IS605 family transposase OrfB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MVRVARTVIVRSVRLPRGVFRVFIELEDVYRSIVEQLTMYAVANNIRSFTRLRALKYHEMRNLHPQLPSHYVYTACQDAS
ARAKSFMRLRKLGLAGKNYPEVKSVSIWLDDHLWRPNGYTSIEVATHEGWVRVGIEPHRQYWRYINGGWRLASEARVRLD
RRNRWLIIYFTFTKEVEEYKPKDFIPVDVNENNVTVLIDGAAYLLETNIEKLTLGYYYRRRSVQEKYDKVYGVESRVKRR
VLRKLKERRKKDDIRWKIAHLIVKAAGERRYGIVLERLGRKPAGSMISRIKDKQLRHRIYQAAFRGIQRVIEEKAREYGV
PVVYVNPSNTSKMCPVHKAPITYNDSRIGECSSGGELWHRDVTATWNLLIRARQGDGSSAPSPGGLPHIDGSPVPLGSTA
THDPITLPKGLWARRNSLPPNETVGRNGGFN

Sequences:

>Translated_431_residues
MVRVARTVIVRSVRLPRGVFRVFIELEDVYRSIVEQLTMYAVANNIRSFTRLRALKYHEMRNLHPQLPSHYVYTACQDAS
ARAKSFMRLRKLGLAGKNYPEVKSVSIWLDDHLWRPNGYTSIEVATHEGWVRVGIEPHRQYWRYINGGWRLASEARVRLD
RRNRWLIIYFTFTKEVEEYKPKDFIPVDVNENNVTVLIDGAAYLLETNIEKLTLGYYYRRRSVQEKYDKVYGVESRVKRR
VLRKLKERRKKDDIRWKIAHLIVKAAGERRYGIVLERLGRKPAGSMISRIKDKQLRHRIYQAAFRGIQRVIEEKAREYGV
PVVYVNPSNTSKMCPVHKAPITYNDSRIGECSSGGELWHRDVTATWNLLIRARQGDGSSAPSPGGLPHIDGSPVPLGSTA
THDPITLPKGLWARRNSLPPNETVGRNGGFN
>Mature_431_residues
MVRVARTVIVRSVRLPRGVFRVFIELEDVYRSIVEQLTMYAVANNIRSFTRLRALKYHEMRNLHPQLPSHYVYTACQDAS
ARAKSFMRLRKLGLAGKNYPEVKSVSIWLDDHLWRPNGYTSIEVATHEGWVRVGIEPHRQYWRYINGGWRLASEARVRLD
RRNRWLIIYFTFTKEVEEYKPKDFIPVDVNENNVTVLIDGAAYLLETNIEKLTLGYYYRRRSVQEKYDKVYGVESRVKRR
VLRKLKERRKKDDIRWKIAHLIVKAAGERRYGIVLERLGRKPAGSMISRIKDKQLRHRIYQAAFRGIQRVIEEKAREYGV
PVVYVNPSNTSKMCPVHKAPITYNDSRIGECSSGGELWHRDVTATWNLLIRARQGDGSSAPSPGGLPHIDGSPVPLGSTA
THDPITLPKGLWARRNSLPPNETVGRNGGFN

Specific function: Unknown

COG id: COG0675

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49877; Mature: 49877

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRVARTVIVRSVRLPRGVFRVFIELEDVYRSIVEQLTMYAVANNIRSFTRLRALKYHEM
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNLHPQLPSHYVYTACQDASARAKSFMRLRKLGLAGKNYPEVKSVSIWLDDHLWRPNGYT
HCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCEECCCCCE
SIEVATHEGWVRVGIEPHRQYWRYINGGWRLASEARVRLDRRNRWLIIYFTFTKEVEEYK
EEEEEECCCEEEECCCHHHHHHHHHCCCEEECHHHHHHEECCCCEEEEEEEEECHHHHCC
PKDFIPVDVNENNVTVLIDGAAYLLETNIEKLTLGYYYRRRSVQEKYDKVYGVESRVKRR
CCCCEEEEECCCCEEEEECCCEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
VLRKLKERRKKDDIRWKIAHLIVKAAGERRYGIVLERLGRKPAGSMISRIKDKQLRHRIY
HHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
QAAFRGIQRVIEEKAREYGVPVVYVNPSNTSKMCPVHKAPITYNDSRIGECSSGGELWHR
HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHC
DVTATWNLLIRARQGDGSSAPSPGGLPHIDGSPVPLGSTATHDPITLPKGLWARRNSLPP
CHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
NETVGRNGGFN
CCCCCCCCCCC
>Mature Secondary Structure
MVRVARTVIVRSVRLPRGVFRVFIELEDVYRSIVEQLTMYAVANNIRSFTRLRALKYHEM
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNLHPQLPSHYVYTACQDASARAKSFMRLRKLGLAGKNYPEVKSVSIWLDDHLWRPNGYT
HCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCEECCCCCE
SIEVATHEGWVRVGIEPHRQYWRYINGGWRLASEARVRLDRRNRWLIIYFTFTKEVEEYK
EEEEEECCCEEEECCCHHHHHHHHHCCCEEECHHHHHHEECCCCEEEEEEEEECHHHHCC
PKDFIPVDVNENNVTVLIDGAAYLLETNIEKLTLGYYYRRRSVQEKYDKVYGVESRVKRR
CCCCEEEEECCCCEEEEECCCEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
VLRKLKERRKKDDIRWKIAHLIVKAAGERRYGIVLERLGRKPAGSMISRIKDKQLRHRIY
HHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
QAAFRGIQRVIEEKAREYGVPVVYVNPSNTSKMCPVHKAPITYNDSRIGECSSGGELWHR
HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHC
DVTATWNLLIRARQGDGSSAPSPGGLPHIDGSPVPLGSTATHDPITLPKGLWARRNSLPP
CHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
NETVGRNGGFN
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]