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The map label for this gene is 159041413

Identifier: 159041413

GI number: 159041413

Start: 884055

End: 885260

Strand: Reverse

Name: 159041413

Synonym: Cmaq_0840

Alternate gene names: NA

Gene position: 885260-884055 (Counterclockwise)

Preceding gene: 159041414

Following gene: 159041409

Centisome position: 42.61

GC content: 44.53

Gene sequence:

>1206_bases
GTGGTTTCAATTAACACTGAATTATTAATAATTGGGGGTGGACCGGCTGGTTCATTCCTAGCAAGTGAGGTTAACCTGGG
TGATGTTACTTTATTAGACAAGAAGAAGATTAACTACGGCCCAGTGGTGTGTGGTGAAATGATGCCTAAGGCCGAATTAC
TGGTGGATTACTTACCCAGTGAATTAATGAGCATGATTGAGTACACGCTTTATAAATCAATTAGGAGGAGTATTATTGTT
AACCACATTAAGACCCTTAGAGTCTTAATTAGGGTTAAGGGTACTATTATAGATCTTGGTAGCATTAATTTCCCAGCATA
CATAGTTAATAAGGGATTAATGATAAGTAGAATCATTAATGATGCAGCTAATAAGGGTGTTAGGGTTAACTTCTCATCAA
CGGTAACAGGATGCATTAAACATGGGGATGGCTTCAAATGCAGGGTAATGGACAATGATGGTGAACACTACGTGGAGACG
CACCTACTTGCTGGCGCCGATGGTTACCCATCAGTAGTGAGGGAACTAGCCAATAACCCACCCTTCAATCCAATGGACAC
TGCAGTGGCCACTAGTCAAAGGGCCATGGGGTGGGGTGGAAGCCTTGACGAGGCTGTTGTAATAATGGACCCAATCCTAG
CACCAGGGGGTTATGCCTGGGTGTTCCCGAGGGGTGATGGTTCAAGTAACGTGGGGTTAGGGATTAGGGGTTATGACGCT
TGGGTTAAGGGTATTAACCCAGTTAACTTGCATAGTGAATTCCTCAAGTCCCTGAACCTTAAACCAACCCAAAGGTCAAT
ACTCCTTAAGACAATTCCAGTGGGTGAGCTTGGAGCCTCTATTGAGGGTAATGGGGTGTATCTACTCGGTGACGCTGCCG
GTACTGTTGTGTCAACTAATGGGGCGGGTATTAATACCGCAATGGTTAGTGGATTAATATTAGCTAAGGTGCTTAAAGAG
GGATTAAGCTACGGTACTGAAATGAGGAGGGTGCTTGGTTCATTTCTCAGTGACGTTAAGAGGCTTAGGGAGTTGGCTGA
CCCAATGCTTTACGATGAGGATGCCTTAGCTAAATTAACTAGAATCATGCCTAGGGAAACGGTTAAGTGGGTTATTAAGG
AGGCCATGCTTGCCTCAGTGAATCCGATGCTGAGGATTGGAGCCAGGATACTGCTTAGTTTAATTAAGGCTAGGGGACGC
ACTTAA

Upstream 100 bases:

>100_bases
CCGTTGGGCTCGACAGCCACCCATGACCCCATAACCCTACCAAAAGGGTTATGGGCGAGGCGGAACTCCCTACCACCGAA
CGAAACTGTAGGGAGAAACG

Downstream 100 bases:

>100_bases
CGAAGCCCCCATCTATAAGTATCATTGAGCCATTTATGTATGATGCCTTATCACTGGCCAGGAAGGCAACCAGGTAACCG
ATTTCCTCAGGGTTACCATA

Product: FAD-binding monooxygenase

Products: NA

Alternate protein names: DGGGPL reductase; 2,3-di-O-geranylgeranylglyceryl phosphate reductase; Geranylgeranyl reductase; GGR [H]

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MVSINTELLIIGGGPAGSFLASEVNLGDVTLLDKKKINYGPVVCGEMMPKAELLVDYLPSELMSMIEYTLYKSIRRSIIV
NHIKTLRVLIRVKGTIIDLGSINFPAYIVNKGLMISRIINDAANKGVRVNFSSTVTGCIKHGDGFKCRVMDNDGEHYVET
HLLAGADGYPSVVRELANNPPFNPMDTAVATSQRAMGWGGSLDEAVVIMDPILAPGGYAWVFPRGDGSSNVGLGIRGYDA
WVKGINPVNLHSEFLKSLNLKPTQRSILLKTIPVGELGASIEGNGVYLLGDAAGTVVSTNGAGINTAMVSGLILAKVLKE
GLSYGTEMRRVLGSFLSDVKRLRELADPMLYDEDALAKLTRIMPRETVKWVIKEAMLASVNPMLRIGARILLSLIKARGR
T

Sequences:

>Translated_401_residues
MVSINTELLIIGGGPAGSFLASEVNLGDVTLLDKKKINYGPVVCGEMMPKAELLVDYLPSELMSMIEYTLYKSIRRSIIV
NHIKTLRVLIRVKGTIIDLGSINFPAYIVNKGLMISRIINDAANKGVRVNFSSTVTGCIKHGDGFKCRVMDNDGEHYVET
HLLAGADGYPSVVRELANNPPFNPMDTAVATSQRAMGWGGSLDEAVVIMDPILAPGGYAWVFPRGDGSSNVGLGIRGYDA
WVKGINPVNLHSEFLKSLNLKPTQRSILLKTIPVGELGASIEGNGVYLLGDAAGTVVSTNGAGINTAMVSGLILAKVLKE
GLSYGTEMRRVLGSFLSDVKRLRELADPMLYDEDALAKLTRIMPRETVKWVIKEAMLASVNPMLRIGARILLSLIKARGR
T
>Mature_401_residues
MVSINTELLIIGGGPAGSFLASEVNLGDVTLLDKKKINYGPVVCGEMMPKAELLVDYLPSELMSMIEYTLYKSIRRSIIV
NHIKTLRVLIRVKGTIIDLGSINFPAYIVNKGLMISRIINDAANKGVRVNFSSTVTGCIKHGDGFKCRVMDNDGEHYVET
HLLAGADGYPSVVRELANNPPFNPMDTAVATSQRAMGWGGSLDEAVVIMDPILAPGGYAWVFPRGDGSSNVGLGIRGYDA
WVKGINPVNLHSEFLKSLNLKPTQRSILLKTIPVGELGASIEGNGVYLLGDAAGTVVSTNGAGINTAMVSGLILAKVLKE
GLSYGTEMRRVLGSFLSDVKRLRELADPMLYDEDALAKLTRIMPRETVKWVIKEAMLASVNPMLRIGARILLSLIKARGR
T

Specific function: Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. DGGGPL reductase subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: NA

Molecular weight: Translated: 43315; Mature: 43315

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSINTELLIIGGGPAGSFLASEVNLGDVTLLDKKKINYGPVVCGEMMPKAELLVDYLPS
CEEECEEEEEEECCCCCCHHHCCCCCCCEEEEECCCCCCCCEEHHCCCCHHHHHHHHHHH
ELMSMIEYTLYKSIRRSIIVNHIKTLRVLIRVKGTIIDLGSINFPAYIVNKGLMISRIIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCHHHHHHHH
DAANKGVRVNFSSTVTGCIKHGDGFKCRVMDNDGEHYVETHLLAGADGYPSVVRELANNP
HHHCCCEEEEEHHHHHHHHCCCCCCEEEEECCCCCHHHHHHEEECCCCCHHHHHHHHCCC
PFNPMDTAVATSQRAMGWGGSLDEAVVIMDPILAPGGYAWVFPRGDGSSNVGLGIRGYDA
CCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCEEEECHHH
WVKGINPVNLHSEFLKSLNLKPTQRSILLKTIPVGELGASIEGNGVYLLGDAAGTVVSTN
HHCCCCCCCHHHHHHHHCCCCCCCHHEEEEECCCHHHCCCCCCCCEEEEECCCCCEEECC
GAGINTAMVSGLILAKVLKEGLSYGTEMRRVLGSFLSDVKRLRELADPMLYDEDALAKLT
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RIMPRETVKWVIKEAMLASVNPMLRIGARILLSLIKARGRT
HHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVSINTELLIIGGGPAGSFLASEVNLGDVTLLDKKKINYGPVVCGEMMPKAELLVDYLPS
CEEECEEEEEEECCCCCCHHHCCCCCCCEEEEECCCCCCCCEEHHCCCCHHHHHHHHHHH
ELMSMIEYTLYKSIRRSIIVNHIKTLRVLIRVKGTIIDLGSINFPAYIVNKGLMISRIIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCHHHHHHHH
DAANKGVRVNFSSTVTGCIKHGDGFKCRVMDNDGEHYVETHLLAGADGYPSVVRELANNP
HHHCCCEEEEEHHHHHHHHCCCCCCEEEEECCCCCHHHHHHEEECCCCCHHHHHHHHCCC
PFNPMDTAVATSQRAMGWGGSLDEAVVIMDPILAPGGYAWVFPRGDGSSNVGLGIRGYDA
CCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCEEEECHHH
WVKGINPVNLHSEFLKSLNLKPTQRSILLKTIPVGELGASIEGNGVYLLGDAAGTVVSTN
HHCCCCCCCHHHHHHHHCCCCCCCHHEEEEECCCHHHCCCCCCCCEEEEECCCCCEEECC
GAGINTAMVSGLILAKVLKEGLSYGTEMRRVLGSFLSDVKRLRELADPMLYDEDALAKLT
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RIMPRETVKWVIKEAMLASVNPMLRIGARILLSLIKARGRT
HHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]