| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041292
Identifier: 159041292
GI number: 159041292
Start: 754307
End: 754567
Strand: Reverse
Name: 159041292
Synonym: Cmaq_0718
Alternate gene names: NA
Gene position: 754567-754307 (Counterclockwise)
Preceding gene: 159041293
Following gene: 159041291
Centisome position: 36.32
GC content: 43.3
Gene sequence:
>261_bases ATGGTAAGGCGTAGGAGTAGGGTTGAGATTATAATGGAAATCCTGGAGTACTTATCTGAGGGCTGCAGTAAACCTACTAA AATGTCCATGGCATTGAATCTGGCTTACGATAGGCTTGATCAAATGCTTCAACAATTAAGGGGTAATGGATTAGTGACGT ATGATGGTGACTCATTCTGCATAACCCATAAGGGGCTTGAACTACTGAGGGAATACCAGAGGTTCAGGAGGCTAGCCAAG TCACTTGGAATAGATCTCTAG
Upstream 100 bases:
>100_bases ATGGTAACTAATTCATTATTCCTTGAGTTAATAGAGGAGAGGCTTGTTTACTCAGTGGTATCCACCATACTGTTAGTGAA TGTTATAAGGGTTGTTCACT
Downstream 100 bases:
>100_bases GCTAATTTAGAGTATTATCTTGGCTTCACCATGGTTAGGAATGCTTATTAACCCTAATGCGACCTTATGCTAATGAGTAG GGCTACTAGGAGCAGGACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MVRRRSRVEIIMEILEYLSEGCSKPTKMSMALNLAYDRLDQMLQQLRGNGLVTYDGDSFCITHKGLELLREYQRFRRLAK SLGIDL
Sequences:
>Translated_86_residues MVRRRSRVEIIMEILEYLSEGCSKPTKMSMALNLAYDRLDQMLQQLRGNGLVTYDGDSFCITHKGLELLREYQRFRRLAK SLGIDL >Mature_86_residues MVRRRSRVEIIMEILEYLSEGCSKPTKMSMALNLAYDRLDQMLQQLRGNGLVTYDGDSFCITHKGLELLREYQRFRRLAK SLGIDL
Specific function: Unknown
COG id: COG3432
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10056; Mature: 10056
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRRRSRVEIIMEILEYLSEGCSKPTKMSMALNLAYDRLDQMLQQLRGNGLVTYDGDSFC CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEE ITHKGLELLREYQRFRRLAKSLGIDL HHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVRRRSRVEIIMEILEYLSEGCSKPTKMSMALNLAYDRLDQMLQQLRGNGLVTYDGDSFC CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEE ITHKGLELLREYQRFRRLAKSLGIDL HHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA