Click here to switch to the map view.

The map label for this gene is 159041291

Identifier: 159041291

GI number: 159041291

Start: 754001

End: 754240

Strand: Reverse

Name: 159041291

Synonym: Cmaq_0717

Alternate gene names: NA

Gene position: 754240-754001 (Counterclockwise)

Preceding gene: 159041292

Following gene: 159041290

Centisome position: 36.3

GC content: 43.75

Gene sequence:

>240_bases
ATGCTAATGAGTAGGGCTACTAGGAGCAGGACTAGGAGGAGGCCATTATCTGGATTTAAGGCATGCAGGAAGTGTAAGCT
AATAGTTCCTGATGAGGTTAATCAATGCCCCAACTGCGGTGGCATTGAATTCAGTGAGGAGTGGAGGGGATTAATAATCA
TACTTAACCCTGAGGAATCATGCATAGCCAAGGAGTTAAATATAACTAAGCCAGGCATGTACGCTGTTGAAGTGACTTAA

Upstream 100 bases:

>100_bases
GAGGCTAGCCAAGTCACTTGGAATAGATCTCTAGGCTAATTTAGAGTATTATCTTGGCTTCACCATGGTTAGGAATGCTT
ATTAACCCTAATGCGACCTT

Downstream 100 bases:

>100_bases
ACTTCATTCAGCATCATAGCCTACTCGCCATTCGCTTAAGTCTATTAATAGGATGAAATATCTATGTACTCTATTGATAT
CGCTATGTGAAATACCGTCA

Product: DNA-directed RNA polymerase subunit E, RpoE2

Products: diphosphate; RNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MLMSRATRSRTRRRPLSGFKACRKCKLIVPDEVNQCPNCGGIEFSEEWRGLIIILNPEESCIAKELNITKPGMYAVEVT

Sequences:

>Translated_79_residues
MLMSRATRSRTRRRPLSGFKACRKCKLIVPDEVNQCPNCGGIEFSEEWRGLIIILNPEESCIAKELNITKPGMYAVEVT
>Mature_79_residues
MLMSRATRSRTRRRPLSGFKACRKCKLIVPDEVNQCPNCGGIEFSEEWRGLIIILNPEESCIAKELNITKPGMYAVEVT

Specific function: Unknown

COG id: COG2093

COG function: function code K; DNA-directed RNA polymerase, subunit E''

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.6

Molecular weight: Translated: 8957; Mature: 8957

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMSRATRSRTRRRPLSGFKACRKCKLIVPDEVNQCPNCGGIEFSEEWRGLIIILNPEES
CCCCCCHHHHHHCCCCHHHHHHHHCCEECCCCCCCCCCCCCCEECCCCCEEEEEECCCHH
CIAKELNITKPGMYAVEVT
HHHHCCCCCCCCEEEEEEC
>Mature Secondary Structure
MLMSRATRSRTRRRPLSGFKACRKCKLIVPDEVNQCPNCGGIEFSEEWRGLIIILNPEES
CCCCCCHHHHHHCCCCHHHHHHHHCCEECCCCCCCCCCCCCCEECCCCCEEEEEECCCHH
CIAKELNITKPGMYAVEVT
HHHHCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: nucleoside triphosphate; RNAn

Specific reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA