| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041293
Identifier: 159041293
GI number: 159041293
Start: 754554
End: 755219
Strand: Reverse
Name: 159041293
Synonym: Cmaq_0719
Alternate gene names: NA
Gene position: 755219-754554 (Counterclockwise)
Preceding gene: 159041294
Following gene: 159041292
Centisome position: 36.35
GC content: 38.29
Gene sequence:
>666_bases ATGGCAATACTGTTGCCTACAAGGCACTTACTTTACTTCCTAATAATAGCCTACGAGGCTTACATACTAATAGCTAACTT ACTAATATCCTACTACGCCTATAGGGCATCAAGGATTCTACGCAGTAGGAATATGCTACTTCTATCAATAGGTATAATGC TCTTCGGGGTATACATGCTTGTTAATAGTTTAATAAATATATCAGTTCTAGCATACTTATACTATGAACCAGCCAGAAGA CTAATATATGTACCACCCAGTGTATACCCCTGGTTGATTGCTGATGGGTTAATGGAGTTAGCCAGCCTTATACTAATATC ACTAGCCCTAAGTCTCCCCACTGAACTCTACGCATTCATTGGTGGCTTACTTATTCTGCGCACTAACCCAATATTCATAA TTCACTCGCTATCGGTATTAAGCATAATTCTATTATCCTACATATGCATACTGCTTTGGTTAAGGTTCTCTCAGGGTAAT AACCTGGTAATGTTAACCGCATTAGCATTCACACTACTACTCTTCAACATCCCAATGGAGGTTTTTGTATTCATGGTAAC TAATTCATTATTCCTTGAGTTAATAGAGGAGAGGCTTGTTTACTCAGTGGTATCCACCATACTGTTAGTGAATGTTATAA GGGTTGTTCACTATGGTAAGGCGTAG
Upstream 100 bases:
>100_bases GTTAATTGAATCAAGGTACTTTAATAGGAGTTATAGTCAGGATAATGAAGCACTAGTGCCATATAGGGTCTTTAGGAGGG GTCTTTAAGGTGATGATCTA
Downstream 100 bases:
>100_bases GAGTAGGGTTGAGATTATAATGGAAATCCTGGAGTACTTATCTGAGGGCTGCAGTAAACCTACTAAAATGTCCATGGCAT TGAATCTGGCTTACGATAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MAILLPTRHLLYFLIIAYEAYILIANLLISYYAYRASRILRSRNMLLLSIGIMLFGVYMLVNSLINISVLAYLYYEPARR LIYVPPSVYPWLIADGLMELASLILISLALSLPTELYAFIGGLLILRTNPIFIIHSLSVLSIILLSYICILLWLRFSQGN NLVMLTALAFTLLLFNIPMEVFVFMVTNSLFLELIEERLVYSVVSTILLVNVIRVVHYGKA
Sequences:
>Translated_221_residues MAILLPTRHLLYFLIIAYEAYILIANLLISYYAYRASRILRSRNMLLLSIGIMLFGVYMLVNSLINISVLAYLYYEPARR LIYVPPSVYPWLIADGLMELASLILISLALSLPTELYAFIGGLLILRTNPIFIIHSLSVLSIILLSYICILLWLRFSQGN NLVMLTALAFTLLLFNIPMEVFVFMVTNSLFLELIEERLVYSVVSTILLVNVIRVVHYGKA >Mature_220_residues AILLPTRHLLYFLIIAYEAYILIANLLISYYAYRASRILRSRNMLLLSIGIMLFGVYMLVNSLINISVLAYLYYEPARRL IYVPPSVYPWLIADGLMELASLILISLALSLPTELYAFIGGLLILRTNPIFIIHSLSVLSIILLSYICILLWLRFSQGNN LVMLTALAFTLLLFNIPMEVFVFMVTNSLFLELIEERLVYSVVSTILLVNVIRVVHYGKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25217; Mature: 25086
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILLPTRHLLYFLIIAYEAYILIANLLISYYAYRASRILRSRNMLLLSIGIMLFGVYML CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VNSLINISVLAYLYYEPARRLIYVPPSVYPWLIADGLMELASLILISLALSLPTELYAFI HHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH GGLLILRTNPIFIIHSLSVLSIILLSYICILLWLRFSQGNNLVMLTALAFTLLLFNIPME HHHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH VFVFMVTNSLFLELIEERLVYSVVSTILLVNVIRVVHYGKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AILLPTRHLLYFLIIAYEAYILIANLLISYYAYRASRILRSRNMLLLSIGIMLFGVYML EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VNSLINISVLAYLYYEPARRLIYVPPSVYPWLIADGLMELASLILISLALSLPTELYAFI HHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH GGLLILRTNPIFIIHSLSVLSIILLSYICILLWLRFSQGNNLVMLTALAFTLLLFNIPME HHHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH VFVFMVTNSLFLELIEERLVYSVVSTILLVNVIRVVHYGKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA