| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041280
Identifier: 159041280
GI number: 159041280
Start: 740801
End: 741325
Strand: Reverse
Name: 159041280
Synonym: Cmaq_0706
Alternate gene names: NA
Gene position: 741325-740801 (Counterclockwise)
Preceding gene: 159041282
Following gene: 159041278
Centisome position: 35.68
GC content: 41.9
Gene sequence:
>525_bases GTGGGTAATGAGGAGTTAAACGTCAAGGAATTACTTGAACTTAGGAGGAGGATTAGGGAGAGAGTCAATGAGCTTAGGGA TGAGTTAAGCATGCTTGAGTCAACACTTAAGGTAATAGATGCATTAATAAGAACTCGATCAATAACCACCGCTGATAAGG TTTCACCCAAGGAGGAATTACACTTAACAGCAGCCAGTGGGGAGGAGGTGGCTAAGTTAACCTATGATGATGACAAGATT GTGATTGAGTTCAGTAAACCAATAACCGAGCAGCCGCCATTAAGGAGGTTCTTCATTGAGAAGGTTCTCAATAGCCTTAA GGGTGAGGATGAGGAGTTGATTAATAATGGTGAGTTAGATGAATCAATGGGGTTTGATTACGAGATTGAGAAGAACAGTG AGGGTCTAATAACCAGGATAATTATTCGGAACTACAGGGAGCAGCGTAGGTTAAGGAGGATAATTGATGCCATTAAGTGG ACTGTATCCAAGATAGGGGAGAAACAAGGTTCAGAAACCTCATAG
Upstream 100 bases:
>100_bases ATAGCCTAGTTACCCTTTTTAAATCTAATGCTACCTGAATGAGTAATGACGGTTTAAGGAATTGGAGTAACATTTATATT GTTTACCTGGATTGTTAACC
Downstream 100 bases:
>100_bases TAACCTTCCCGTATAGTACCTTGCCAGGCTCCTAATTCTCCTAACCCACTTAACCACGGAAGCCGCCTTATCACCTCCTA TGACGCTACTGTAGCCGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MGNEELNVKELLELRRRIRERVNELRDELSMLESTLKVIDALIRTRSITTADKVSPKEELHLTAASGEEVAKLTYDDDKI VIEFSKPITEQPPLRRFFIEKVLNSLKGEDEELINNGELDESMGFDYEIEKNSEGLITRIIIRNYREQRRLRRIIDAIKW TVSKIGEKQGSETS
Sequences:
>Translated_174_residues MGNEELNVKELLELRRRIRERVNELRDELSMLESTLKVIDALIRTRSITTADKVSPKEELHLTAASGEEVAKLTYDDDKI VIEFSKPITEQPPLRRFFIEKVLNSLKGEDEELINNGELDESMGFDYEIEKNSEGLITRIIIRNYREQRRLRRIIDAIKW TVSKIGEKQGSETS >Mature_173_residues GNEELNVKELLELRRRIRERVNELRDELSMLESTLKVIDALIRTRSITTADKVSPKEELHLTAASGEEVAKLTYDDDKIV IEFSKPITEQPPLRRFFIEKVLNSLKGEDEELINNGELDESMGFDYEIEKNSEGLITRIIIRNYREQRRLRRIIDAIKWT VSKIGEKQGSETS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20247; Mature: 20116
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNEELNVKELLELRRRIRERVNELRDELSMLESTLKVIDALIRTRSITTADKVSPKEEL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHE HLTAASGEEVAKLTYDDDKIVIEFSKPITEQPPLRRFFIEKVLNSLKGEDEELINNGELD EEECCCCCHHHEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCC ESMGFDYEIEKNSEGLITRIIIRNYREQRRLRRIIDAIKWTVSKIGEKQGSETS HHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GNEELNVKELLELRRRIRERVNELRDELSMLESTLKVIDALIRTRSITTADKVSPKEEL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHE HLTAASGEEVAKLTYDDDKIVIEFSKPITEQPPLRRFFIEKVLNSLKGEDEELINNGELD EEECCCCCHHHEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCC ESMGFDYEIEKNSEGLITRIIIRNYREQRRLRRIIDAIKWTVSKIGEKQGSETS HHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA