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The map label for this gene is rpl15p [H]

Identifier: 159041278

GI number: 159041278

Start: 739652

End: 740095

Strand: Reverse

Name: rpl15p [H]

Synonym: Cmaq_0704

Alternate gene names: 159041278

Gene position: 740095-739652 (Counterclockwise)

Preceding gene: 159041280

Following gene: 159041277

Centisome position: 35.62

GC content: 43.24

Gene sequence:

>444_bases
GTGAGACGTAGAGAGAAGAAGTCTAGGAAGCTTAGGGGCTGGAGAACCCACTCATGGGGGAGGGTTGGTCAGCATAGGAG
CAGGGGTCAAAGAGGTGGGGGAGGTAAGATTGGTTTACTTAAGCATAAGAAGAGCCTGCTACTTAAGATAACTAATGGTG
AACTTTACCCATTAATAGGTAAGCATGGCTTCTATAGGCCGAGTCCTGAGGTTAATGTAATAAATGTAGGTGACTTAAAT
GGGTTAATTGATTCACTGCAGAGGAGGAATTTAATTAAGATGGAGGGTGATAAGTACATTATTGACTTAACTCAACTGGG
GTATGGTAAACTACTTGGTGAAGGTAAGATACAGAAGCCCGTGGTGGTTAAGGTTAGGGCTGCTTCAGCAAAGGCTATTA
AGGCTATTAAGGAGGCTGGTGGTGAAGTCTTAATAGTTCAATAG

Upstream 100 bases:

>100_bases
AATCCTCCAAGTACAGCAAAGCCTCAGCACCCTTGGCTATTACCTTCATTAAGTTGGGTTGTATTGTTAAAGTTTTAAAC
CCTCCCCATTAAGGGTGCTT

Downstream 100 bases:

>100_bases
TGTTAATGATTAATATGAGCTAATGCTTATACACCCATTAACCTAGGCTTAATCATGAAGGTTCCAGTACTCATAATAAA
CATGAAGGCTTACCCAGAGT

Product: 50S ribosomal protein L15

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRRREKKSRKLRGWRTHSWGRVGQHRSRGQRGGGGKIGLLKHKKSLLLKITNGELYPLIGKHGFYRPSPEVNVINVGDLN
GLIDSLQRRNLIKMEGDKYIIDLTQLGYGKLLGEGKIQKPVVVKVRAASAKAIKAIKEAGGEVLIVQ

Sequences:

>Translated_147_residues
MRRREKKSRKLRGWRTHSWGRVGQHRSRGQRGGGGKIGLLKHKKSLLLKITNGELYPLIGKHGFYRPSPEVNVINVGDLN
GLIDSLQRRNLIKMEGDKYIIDLTQLGYGKLLGEGKIQKPVVVKVRAASAKAIKAIKEAGGEVLIVQ
>Mature_147_residues
MRRREKKSRKLRGWRTHSWGRVGQHRSRGQRGGGGKIGLLKHKKSLLLKITNGELYPLIGKHGFYRPSPEVNVINVGDLN
GLIDSLQRRNLIKMEGDKYIIDLTQLGYGKLLGEGKIQKPVVVKVRAASAKAIKAIKEAGGEVLIVQ

Specific function: Binds to the 23S rRNA [H]

COG id: COG0200

COG function: function code J; Ribosomal protein L15

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15P family [H]

Homologues:

Organism=Homo sapiens, GI4506625, Length=149, Percent_Identity=36.241610738255, Blast_Score=66, Evalue=9e-12,
Organism=Drosophila melanogaster, GI17136880, Length=152, Percent_Identity=34.8684210526316, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021131 [H]

Pfam domain/function: PF00828 Ribosomal_L18e [H]

EC number: NA

Molecular weight: Translated: 16398; Mature: 16398

Theoretical pI: Translated: 11.49; Mature: 11.49

Prosite motif: PS00475 RIBOSOMAL_L15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRREKKSRKLRGWRTHSWGRVGQHRSRGQRGGGGKIGLLKHKKSLLLKITNGELYPLIG
CCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEC
KHGFYRPSPEVNVINVGDLNGLIDSLQRRNLIKMEGDKYIIDLTQLGYGKLLGEGKIQKP
CCCCCCCCCCEEEEEECCHHHHHHHHHHCCEEEECCCEEEEEEECCCCCEEECCCCCCCC
VVVKVRAASAKAIKAIKEAGGEVLIVQ
EEEEEECCCHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MRRREKKSRKLRGWRTHSWGRVGQHRSRGQRGGGGKIGLLKHKKSLLLKITNGELYPLIG
CCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEC
KHGFYRPSPEVNVINVGDLNGLIDSLQRRNLIKMEGDKYIIDLTQLGYGKLLGEGKIQKP
CCCCCCCCCCEEEEEECCHHHHHHHHHHCCEEEECCCEEEEEEECCCCCEEECCCCCCCC
VVVKVRAASAKAIKAIKEAGGEVLIVQ
EEEEEECCCHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA