| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041266
Identifier: 159041266
GI number: 159041266
Start: 725735
End: 726793
Strand: Reverse
Name: 159041266
Synonym: Cmaq_0688
Alternate gene names: NA
Gene position: 726793-725735 (Counterclockwise)
Preceding gene: 159041267
Following gene: 159041265
Centisome position: 34.98
GC content: 44.38
Gene sequence:
>1059_bases ATGAAGATTAGGGCAGTGACCTTATTCACAGATGACTTAGCCTCATTACCTAACCTACTGGATAGGGTTAATGCGGGCAT TAGCGTAGTCTCATCTAAGTATGGTGTAAGCATTGTTACTAAGAGGGTTACGTTACCATTCGTAAATGATGCTAATGCGG CCAAGGAGCAGCTTAGGGTACTTAAATCCACAGCCGCCAGGAGGGGTTACGTTTACTCAGGTTTAAGCCTAATGACTCCT CTAGATTCCTCCACCGTGGTTAAGTTGATTAATGAGTATGATACCTACTCCATGGTTTGGATGCCTGAGTATGATGATGA AGTAGTCGACTTCTACGTTAACCTACTTAAGTTAATCGCCTCCGAGGAACCATTAGCAGCTAGGAAGGTGGCTATACTCC TAGGTGACTTAATTGAAACCCCATACTACCCGGCATCTGTTAACGTTAAGGGTGGTACTGGGTTATCAATAGCAATACTA TACGCCTCAGACCTACTGGAGGGTGGTGATTTGCAGAGGAGGTTAAGGGACATTGTGGGTAAGGCTAATGAAATAGGTGA GGAGTTGAGTGAATTAGCCGGCGTGGAGTACAGGGGTATTGATGCTTCACTATCACCCTGGGGTCAGGACTCTGTGGTTA AGGTGATTGAGAAGGTGGGTGGGTTAAGGTTTGGTGAATTAGGGACCATGGCGACCATTGGCCTCATTAATAGGTTGATA ACGGAATTACCCTTCAGTAAGACAGGATTCAATGAGGTTATGTTACCGTTGGGGGAGGATGATGAGTTGAAGGAGAGGTT TAATAATGGTTTAGTTGACTTATTTAAACTAATATCATATACGCAGGTTTGCGTGGCGGGTATTGACATGGTTCCAGTAC CAATTAATGAACTTGGGTTAATTAAGAACCTACTCCTTGACTTAACCGAGGTGGTTAGGGTTAAGGGTCGTTCACTGGGT GTTAGGCTTATTCCAGCTAAAGGGACTAGTATTGACTTAGGGGAGGACTTCGGTAAATCCCCGGTTGTCAGTCTGTTAAC CGGTAAGGTTCTTAAATAA
Upstream 100 bases:
>100_bases CGTATTAACGTACAGGATTAAGGCGCATATACTTAGCGGTATTAGGCTTGAATGCTGAATGTGGGTTATGTTTAATAACT CCTAACTGTAATTAAACTTC
Downstream 100 bases:
>100_bases TGCTACATAGGTTATATACCCTATTATAGGATACTTTATTAAACACCACTGAGGTAACTAAGTATGCCTAACTGGTACTG GGATGTTAAGCCAAGTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKIRAVTLFTDDLASLPNLLDRVNAGISVVSSKYGVSIVTKRVTLPFVNDANAAKEQLRVLKSTAARRGYVYSGLSLMTP LDSSTVVKLINEYDTYSMVWMPEYDDEVVDFYVNLLKLIASEEPLAARKVAILLGDLIETPYYPASVNVKGGTGLSIAIL YASDLLEGGDLQRRLRDIVGKANEIGEELSELAGVEYRGIDASLSPWGQDSVVKVIEKVGGLRFGELGTMATIGLINRLI TELPFSKTGFNEVMLPLGEDDELKERFNNGLVDLFKLISYTQVCVAGIDMVPVPINELGLIKNLLLDLTEVVRVKGRSLG VRLIPAKGTSIDLGEDFGKSPVVSLLTGKVLK
Sequences:
>Translated_352_residues MKIRAVTLFTDDLASLPNLLDRVNAGISVVSSKYGVSIVTKRVTLPFVNDANAAKEQLRVLKSTAARRGYVYSGLSLMTP LDSSTVVKLINEYDTYSMVWMPEYDDEVVDFYVNLLKLIASEEPLAARKVAILLGDLIETPYYPASVNVKGGTGLSIAIL YASDLLEGGDLQRRLRDIVGKANEIGEELSELAGVEYRGIDASLSPWGQDSVVKVIEKVGGLRFGELGTMATIGLINRLI TELPFSKTGFNEVMLPLGEDDELKERFNNGLVDLFKLISYTQVCVAGIDMVPVPINELGLIKNLLLDLTEVVRVKGRSLG VRLIPAKGTSIDLGEDFGKSPVVSLLTGKVLK >Mature_352_residues MKIRAVTLFTDDLASLPNLLDRVNAGISVVSSKYGVSIVTKRVTLPFVNDANAAKEQLRVLKSTAARRGYVYSGLSLMTP LDSSTVVKLINEYDTYSMVWMPEYDDEVVDFYVNLLKLIASEEPLAARKVAILLGDLIETPYYPASVNVKGGTGLSIAIL YASDLLEGGDLQRRLRDIVGKANEIGEELSELAGVEYRGIDASLSPWGQDSVVKVIEKVGGLRFGELGTMATIGLINRLI TELPFSKTGFNEVMLPLGEDDELKERFNNGLVDLFKLISYTQVCVAGIDMVPVPINELGLIKNLLLDLTEVVRVKGRSLG VRLIPAKGTSIDLGEDFGKSPVVSLLTGKVLK
Specific function: Unknown
COG id: COG2848
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0210 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007841 [H]
Pfam domain/function: PF05167 DUF711 [H]
EC number: NA
Molecular weight: Translated: 38299; Mature: 38299
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRAVTLFTDDLASLPNLLDRVNAGISVVSSKYGVSIVTKRVTLPFVNDANAAKEQLRV CCEEEEEEEHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHH LKSTAARRGYVYSGLSLMTPLDSSTVVKLINEYDTYSMVWMPEYDDEVVDFYVNLLKLIA HHHHHHHCCEEECCCHHCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHH SEEPLAARKVAILLGDLIETPYYPASVNVKGGTGLSIAILYASDLLEGGDLQRRLRDIVG CCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEHHHHHCCCHHHHHHHHHHC KANEIGEELSELAGVEYRGIDASLSPWGQDSVVKVIEKVGGLRFGELGTMATIGLINRLI CHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH TELPFSKTGFNEVMLPLGEDDELKERFNNGLVDLFKLISYTQVCVAGIDMVPVPINELGL HHCCCCCCCCCCEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCHHHHHH IKNLLLDLTEVVRVKGRSLGVRLIPAKGTSIDLGEDFGKSPVVSLLTGKVLK HHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MKIRAVTLFTDDLASLPNLLDRVNAGISVVSSKYGVSIVTKRVTLPFVNDANAAKEQLRV CCEEEEEEEHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHH LKSTAARRGYVYSGLSLMTPLDSSTVVKLINEYDTYSMVWMPEYDDEVVDFYVNLLKLIA HHHHHHHCCEEECCCHHCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHH SEEPLAARKVAILLGDLIETPYYPASVNVKGGTGLSIAILYASDLLEGGDLQRRLRDIVG CCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEHHHHHCCCHHHHHHHHHHC KANEIGEELSELAGVEYRGIDASLSPWGQDSVVKVIEKVGGLRFGELGTMATIGLINRLI CHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH TELPFSKTGFNEVMLPLGEDDELKERFNNGLVDLFKLISYTQVCVAGIDMVPVPINELGL HHCCCCCCCCCCEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEECCCHHHHHH IKNLLLDLTEVVRVKGRSLGVRLIPAKGTSIDLGEDFGKSPVVSLLTGKVLK HHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572479 [H]