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The map label for this gene is rps27Ae

Identifier: 159041173

GI number: 159041173

Start: 623925

End: 624143

Strand: Reverse

Name: rps27Ae

Synonym: Cmaq_0594

Alternate gene names: 159041173

Gene position: 624143-623925 (Counterclockwise)

Preceding gene: 159041179

Following gene: 159041172

Centisome position: 30.04

GC content: 45.66

Gene sequence:

>219_bases
ATGTTAAGTATGAGTAAGGCTGTTAAGGCAAGGGCACACACTTGGTATACCATAGACATGGAGAAGGGTGTGTTTAGGTT
TAATAAGAGACTATGCCCTAGGTGTGGTTCAGTAATGGCTTACCACAAGGAACCAGTACCCAGGTGGCATTGCGGTAAAT
GCGGTTACACTATATTTGAAAGCCAAGCACCAAGACAGAGGCCGAGTAGAGGTAGGTGA

Upstream 100 bases:

>100_bases
ACCAGTTTCATAACCCAACCACACTTCACGTGAATTTAAATGCAATGCACCAGGGTGGGCGATACATTAGACAGCTATTT
TTAAAAAGGGAGGTAACCGA

Downstream 100 bases:

>100_bases
AGGCTCAAATTAATGACTCTAAATCATAATAAATCCACTGGGTTGAGTGAGGATTTAAATAGAACTAGGATTCGTGAGGC
TTGTGATAATTCTCGGCATT

Product: 30S ribosomal protein S27a

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MLSMSKAVKARAHTWYTIDMEKGVFRFNKRLCPRCGSVMAYHKEPVPRWHCGKCGYTIFESQAPRQRPSRGR

Sequences:

>Translated_72_residues
MLSMSKAVKARAHTWYTIDMEKGVFRFNKRLCPRCGSVMAYHKEPVPRWHCGKCGYTIFESQAPRQRPSRGR
>Mature_72_residues
MLSMSKAVKARAHTWYTIDMEKGVFRFNKRLCPRCGSVMAYHKEPVPRWHCGKCGYTIFESQAPRQRPSRGR

Specific function: Unknown

COG id: COG1998

COG function: function code J; Ribosomal protein S27AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S27Ae family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS27A_CALMQ (A8MCC9)

Other databases:

- EMBL:   CP000852
- RefSeq:   YP_001540425.1
- ProteinModelPortal:   A8MCC9
- SMR:   A8MCC9
- GeneID:   5709353
- GenomeReviews:   CP000852_GR
- KEGG:   cma:Cmaq_0594
- HOGENOM:   HBG512791
- OMA:   EPVPRWH
- BioCyc:   CMAQ397948:CMAQ_0594-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00777
- InterPro:   IPR002906
- InterPro:   IPR022845
- InterPro:   IPR004039
- Gene3D:   G3DSA:2.20.28.10

Pfam domain/function: PF01599 Ribosomal_S27

EC number: NA

Molecular weight: Translated: 8432; Mature: 8432

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
11.1 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
11.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSMSKAVKARAHTWYTIDMEKGVFRFNKRLCPRCGSVMAYHKEPVPRWHCGKCGYTIFE
CCCCHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEC
SQAPRQRPSRGR
CCCCCCCCCCCC
>Mature Secondary Structure
MLSMSKAVKARAHTWYTIDMEKGVFRFNKRLCPRCGSVMAYHKEPVPRWHCGKCGYTIFE
CCCCHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEC
SQAPRQRPSRGR
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA