Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

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The map label for this gene is 159040818

Identifier: 159040818

GI number: 159040818

Start: 267533

End: 269896

Strand: Reverse

Name: 159040818

Synonym: Cmaq_0232

Alternate gene names: NA

Gene position: 269896-267533 (Counterclockwise)

Preceding gene: 159040819

Following gene: 159040817

Centisome position: 12.99

GC content: 40.78

Gene sequence:

>2364_bases
ATGCCTAAACTCAATAAAAACACGATACTACCAGTAATCATAATAGCCGCAGTAATCATACTGTACAGCTCAATAACAGC
ACACGCGCAACAAAAGCCGCAATTCGTAATACCGACATGGGGTACTTTATTATATGTTCCTGGTAGCCCAGTATGGAATC
CATATGCTCCTGGTAATGATATTTGGTGGCCTACATCAGCCCCACCATTAGCGTTTTGGAGCGTATTCACAGGTCAGCCA
TTACCGATTTTAGCTAAGAATTGGACTGTTGAGGTTTTGCCTAATGGTAGTGGTATTTTAACGATTTACCTTAGGCATGA
TATTTATTGGTTTAATGGTTCAGCTACAATGCCTTTCACCGCATGGGATGTTTACGCCTACTTCTATATTGGTATGAAGG
CTTTTGGTTGGTATGTGCCGTTCATAAACCAATCCCTTGTTGATGAAGACGTTAGAGTACTAAACAACTACACTATTCAA
TTCCTATTCCAGAAGTGGGCACCATACATACCATACTGGATCTTAACAAGTAATACACCAACACCGTACTCAGTTTGGAA
ACCAATAGTCGATGCATTAAAAACAATGAATGTAACACAAGCCATAGAATTTGGTTCAACGAATATAACGAAGTTTGTAC
CACCATACTGGGGTCTTGGCCCATATTACATGACCTCAATAGGCTCTAACTTTGTAGCATATACACTAGAGCCCTTATAC
TTTAATGGTATACCACTTCTAGCAACATGGCTTAAAATATTACCATGGGAGTCATGGACTTATTATGATCCAACTATAAT
TAATAAGTTCATCCCAGGGGGAACAGCCTCAATATTAACAATGATTGAGGCTCACCAAAACATGGGATACATAAGTGTTG
GCTGGACTGCTCAGCAGCTTAAAATCATAAACAGTACACCAGGTTATGCTGTTCTTTGGTATCCTGGATTCTGGTCATTT
GGTATTGCTCTCAATCCTTACGTATATCCATTCAACTTACCTCAAGTAAGGCAAGCCTTCTGTTACGCTGTAAATAGGAC
TGAGGTCTCATTATCATGGATATCTTCCCCAGCACCTTATCCTGCCCCTGTTACACCAAATGTAGCGTTCACTTTCCCGG
CATCAGTCCTGAAATACTACATCCCATGCACATATAACTTAACTTATGCCAGTGACTTACTCAAGTCTGCCGGCCTCACC
TATAAGAATGGTCAATGGTACTTACCTAATGGTACATCATTAACAATCTTAATCTCTGGTCCAAGTGGCTGGACATACTT
TATGACTCAAGGTGAGGTTGTTGCTGAGGAATGGTCAGCTTTCGGTGTTCCCACGAAGGAATTAAGCCTTGATTTAAGTA
CATATTTTGGTACCATTTGGCCTCATCTTGAGTGGGAGGCCGCAGAGATTCAGGCGCCAGAATTTCTAGTGCATAGTTAT
GAATCCGCATGGACCTATTTATCTAGTCAATCCTGGATTACTACTTTCATAAACATCAGTAAGCCTTGGCCATTCGCATG
GCCTACTACGTCAAACGGCAAGATCACTGGCTGGTACTGCTCACCAGTAACAGTTACTGTACCATCAATGTATAATAGTA
CTCCACCTTACTTAAACGGCACTATTGTGACGTGTGTTAACTCAACGTTTGGGTACATTAATTTAACAAATTGGTTTAAT
ACATATGATGTGTCAACTCCAGGAAGCAATTTATATGAGTACTTAACGGAGGTCTTATTTGCATGGTATGATTACTATGT
TCCTGTAATACCGATAGTCTATTACCCATATATAAAAGTTTATCAGCCAAGTTACATGGATCCGCTATGGCTCTATAAGT
GTGCATTACCTTATGCATCAATTATGTTCTACAATATACTGGATGCTCATGAGAATGGTGGCCAATGGAATGTATGGGCA
GGTTCACCTAGGGAATGGCTTGACCTTGGAGCAATAGCTCCGCCGCCAAATGTACCACCTTTAGCTCAATTAATCGCTAA
TGGTAGTCTTTGGACTAAGTATCCTCAGTTTGCGGCTTACCTAGGTATTCCTAATCCTGATCCAAGCCTACAGCAGTGTG
TTGCATCGTACTTCCATATACCGTATACTCCAGTATCAACCACTACACCAGTAACCACTACTTCAACTACTACTTCAACA
GTAACCACTACTGCTGTTAGCACTGTTACAAGCACAGTCACAACCACTGCCGTAAGCACAGTGACTAGTACAGCAACAAC
CACAGCAGTATCCACAGTAACCGTGACTAAACCAGTAATATCAACAGCACTAATAGCAGGAATAGTAATAATAGTAATAG
TCATAGCCATAGTAGCAGCAATAATAACACTAAGAAGAAGATGA

Upstream 100 bases:

>100_bases
TATGGTTTAATTAAATTCATTAGAAGCAATCACTTACTAAAACATGTTTAATCACCAATATTGTAGCAAAAATTATTAAC
CATTAGCATTAATAAAAATT

Downstream 100 bases:

>100_bases
GGTAATGATTTACGTTAAGTCAATGGTCTTAAATTTAAAATTAAGTTTTTCTTAAATCCTCTGATTAAAGTGAGTCCCCT
TCAGGGATTAACTGCCAATG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 787; Mature: 786

Protein sequence:

>787_residues
MPKLNKNTILPVIIIAAVIILYSSITAHAQQKPQFVIPTWGTLLYVPGSPVWNPYAPGNDIWWPTSAPPLAFWSVFTGQP
LPILAKNWTVEVLPNGSGILTIYLRHDIYWFNGSATMPFTAWDVYAYFYIGMKAFGWYVPFINQSLVDEDVRVLNNYTIQ
FLFQKWAPYIPYWILTSNTPTPYSVWKPIVDALKTMNVTQAIEFGSTNITKFVPPYWGLGPYYMTSIGSNFVAYTLEPLY
FNGIPLLATWLKILPWESWTYYDPTIINKFIPGGTASILTMIEAHQNMGYISVGWTAQQLKIINSTPGYAVLWYPGFWSF
GIALNPYVYPFNLPQVRQAFCYAVNRTEVSLSWISSPAPYPAPVTPNVAFTFPASVLKYYIPCTYNLTYASDLLKSAGLT
YKNGQWYLPNGTSLTILISGPSGWTYFMTQGEVVAEEWSAFGVPTKELSLDLSTYFGTIWPHLEWEAAEIQAPEFLVHSY
ESAWTYLSSQSWITTFINISKPWPFAWPTTSNGKITGWYCSPVTVTVPSMYNSTPPYLNGTIVTCVNSTFGYINLTNWFN
TYDVSTPGSNLYEYLTEVLFAWYDYYVPVIPIVYYPYIKVYQPSYMDPLWLYKCALPYASIMFYNILDAHENGGQWNVWA
GSPREWLDLGAIAPPPNVPPLAQLIANGSLWTKYPQFAAYLGIPNPDPSLQQCVASYFHIPYTPVSTTTPVTTTSTTTST
VTTTAVSTVTSTVTTTAVSTVTSTATTTAVSTVTVTKPVISTALIAGIVIIVIVIAIVAAIITLRRR

Sequences:

>Translated_787_residues
MPKLNKNTILPVIIIAAVIILYSSITAHAQQKPQFVIPTWGTLLYVPGSPVWNPYAPGNDIWWPTSAPPLAFWSVFTGQP
LPILAKNWTVEVLPNGSGILTIYLRHDIYWFNGSATMPFTAWDVYAYFYIGMKAFGWYVPFINQSLVDEDVRVLNNYTIQ
FLFQKWAPYIPYWILTSNTPTPYSVWKPIVDALKTMNVTQAIEFGSTNITKFVPPYWGLGPYYMTSIGSNFVAYTLEPLY
FNGIPLLATWLKILPWESWTYYDPTIINKFIPGGTASILTMIEAHQNMGYISVGWTAQQLKIINSTPGYAVLWYPGFWSF
GIALNPYVYPFNLPQVRQAFCYAVNRTEVSLSWISSPAPYPAPVTPNVAFTFPASVLKYYIPCTYNLTYASDLLKSAGLT
YKNGQWYLPNGTSLTILISGPSGWTYFMTQGEVVAEEWSAFGVPTKELSLDLSTYFGTIWPHLEWEAAEIQAPEFLVHSY
ESAWTYLSSQSWITTFINISKPWPFAWPTTSNGKITGWYCSPVTVTVPSMYNSTPPYLNGTIVTCVNSTFGYINLTNWFN
TYDVSTPGSNLYEYLTEVLFAWYDYYVPVIPIVYYPYIKVYQPSYMDPLWLYKCALPYASIMFYNILDAHENGGQWNVWA
GSPREWLDLGAIAPPPNVPPLAQLIANGSLWTKYPQFAAYLGIPNPDPSLQQCVASYFHIPYTPVSTTTPVTTTSTTTST
VTTTAVSTVTSTVTTTAVSTVTSTATTTAVSTVTVTKPVISTALIAGIVIIVIVIAIVAAIITLRRR
>Mature_786_residues
PKLNKNTILPVIIIAAVIILYSSITAHAQQKPQFVIPTWGTLLYVPGSPVWNPYAPGNDIWWPTSAPPLAFWSVFTGQPL
PILAKNWTVEVLPNGSGILTIYLRHDIYWFNGSATMPFTAWDVYAYFYIGMKAFGWYVPFINQSLVDEDVRVLNNYTIQF
LFQKWAPYIPYWILTSNTPTPYSVWKPIVDALKTMNVTQAIEFGSTNITKFVPPYWGLGPYYMTSIGSNFVAYTLEPLYF
NGIPLLATWLKILPWESWTYYDPTIINKFIPGGTASILTMIEAHQNMGYISVGWTAQQLKIINSTPGYAVLWYPGFWSFG
IALNPYVYPFNLPQVRQAFCYAVNRTEVSLSWISSPAPYPAPVTPNVAFTFPASVLKYYIPCTYNLTYASDLLKSAGLTY
KNGQWYLPNGTSLTILISGPSGWTYFMTQGEVVAEEWSAFGVPTKELSLDLSTYFGTIWPHLEWEAAEIQAPEFLVHSYE
SAWTYLSSQSWITTFINISKPWPFAWPTTSNGKITGWYCSPVTVTVPSMYNSTPPYLNGTIVTCVNSTFGYINLTNWFNT
YDVSTPGSNLYEYLTEVLFAWYDYYVPVIPIVYYPYIKVYQPSYMDPLWLYKCALPYASIMFYNILDAHENGGQWNVWAG
SPREWLDLGAIAPPPNVPPLAQLIANGSLWTKYPQFAAYLGIPNPDPSLQQCVASYFHIPYTPVSTTTPVTTTSTTTSTV
TTTAVSTVTSTVTTTAVSTVTSTATTTAVSTVTVTKPVISTALIAGIVIIVIVIAIVAAIITLRRR

Specific function: Unknown

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88179; Mature: 88048

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLNKNTILPVIIIAAVIILYSSITAHAQQKPQFVIPTWGTLLYVPGSPVWNPYAPGND
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCCCCC
IWWPTSAPPLAFWSVFTGQPLPILAKNWTVEVLPNGSGILTIYLRHDIYWFNGSATMPFT
CCCCCCCCCCEEEHHHCCCCCEEEECCCEEEEEECCCCEEEEEEEEEEEEECCCCCCCEE
AWDVYAYFYIGMKAFGWYVPFINQSLVDEDVRVLNNYTIQFLFQKWAPYIPYWILTSNTP
HHHHHHHHHHHHHHHHEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
TPYSVWKPIVDALKTMNVTQAIEFGSTNITKFVPPYWGLGPYYMTSIGSNFVAYTLEPLY
CCHHHHHHHHHHHHHCCHHHHHCCCCCCCEEECCCCCCCCHHHHHHCCCCEEEEEECCEE
FNGIPLLATWLKILPWESWTYYDPTIINKFIPGGTASILTMIEAHQNMGYISVGWTAQQL
ECCHHHHHHHHHHCCCCCCCEECHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCEEE
KIINSTPGYAVLWYPGFWSFGIALNPYVYPFNLPQVRQAFCYAVNRTEVSLSWISSPAPY
EEEECCCCEEEEECCCCEECCEEECCEEEECCCHHHHHHHHHEECCCEEEEEEECCCCCC
PAPVTPNVAFTFPASVLKYYIPCTYNLTYASDLLKSAGLTYKNGQWYLPNGTSLTILISG
CCCCCCCEEEECCHHHHHEECCCEEECHHHHHHHHHCCCEEECCEEECCCCCEEEEEEEC
PSGWTYFMTQGEVVAEEWSAFGVPTKELSLDLSTYFGTIWPHLEWEAAEIQAPEFLVHSY
CCCEEEEEECCCEEHHHHHHCCCCHHHHEEEHHHHHHHHCCCCEECHHHCCCCHHHHHHH
ESAWTYLSSQSWITTFINISKPWPFAWPTTSNGKITGWYCSPVTVTVPSMYNSTPPYLNG
HHHHHEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCC
TIVTCVNSTFGYINLTNWFNTYDVSTPGSNLYEYLTEVLFAWYDYYVPVIPIVYYPYIKV
EEEEEECCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
YQPSYMDPLWLYKCALPYASIMFYNILDAHENGGQWNVWAGSPREWLDLGAIAPPPNVPP
ECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCH
LAQLIANGSLWTKYPQFAAYLGIPNPDPSLQQCVASYFHIPYTPVSTTTPVTTTSTTTST
HHHHHCCCCCEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCE
VTTTAVSTVTSTVTTTAVSTVTSTATTTAVSTVTVTKPVISTALIAGIVIIVIVIAIVAA
EEHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
IITLRRR
HHHHCCC
>Mature Secondary Structure 
PKLNKNTILPVIIIAAVIILYSSITAHAQQKPQFVIPTWGTLLYVPGSPVWNPYAPGND
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCCCCC
IWWPTSAPPLAFWSVFTGQPLPILAKNWTVEVLPNGSGILTIYLRHDIYWFNGSATMPFT
CCCCCCCCCCEEEHHHCCCCCEEEECCCEEEEEECCCCEEEEEEEEEEEEECCCCCCCEE
AWDVYAYFYIGMKAFGWYVPFINQSLVDEDVRVLNNYTIQFLFQKWAPYIPYWILTSNTP
HHHHHHHHHHHHHHHHEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
TPYSVWKPIVDALKTMNVTQAIEFGSTNITKFVPPYWGLGPYYMTSIGSNFVAYTLEPLY
CCHHHHHHHHHHHHHCCHHHHHCCCCCCCEEECCCCCCCCHHHHHHCCCCEEEEEECCEE
FNGIPLLATWLKILPWESWTYYDPTIINKFIPGGTASILTMIEAHQNMGYISVGWTAQQL
ECCHHHHHHHHHHCCCCCCCEECHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCEEE
KIINSTPGYAVLWYPGFWSFGIALNPYVYPFNLPQVRQAFCYAVNRTEVSLSWISSPAPY
EEEECCCCEEEEECCCCEECCEEECCEEEECCCHHHHHHHHHEECCCEEEEEEECCCCCC
PAPVTPNVAFTFPASVLKYYIPCTYNLTYASDLLKSAGLTYKNGQWYLPNGTSLTILISG
CCCCCCCEEEECCHHHHHEECCCEEECHHHHHHHHHCCCEEECCEEECCCCCEEEEEEEC
PSGWTYFMTQGEVVAEEWSAFGVPTKELSLDLSTYFGTIWPHLEWEAAEIQAPEFLVHSY
CCCEEEEEECCCEEHHHHHHCCCCHHHHEEEHHHHHHHHCCCCEECHHHCCCCHHHHHHH
ESAWTYLSSQSWITTFINISKPWPFAWPTTSNGKITGWYCSPVTVTVPSMYNSTPPYLNG
HHHHHEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCC
TIVTCVNSTFGYINLTNWFNTYDVSTPGSNLYEYLTEVLFAWYDYYVPVIPIVYYPYIKV
EEEEEECCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
YQPSYMDPLWLYKCALPYASIMFYNILDAHENGGQWNVWAGSPREWLDLGAIAPPPNVPP
ECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCH
LAQLIANGSLWTKYPQFAAYLGIPNPDPSLQQCVASYFHIPYTPVSTTTPVTTTSTTTST
HHHHHCCCCCEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCE
VTTTAVSTVTSTVTTTAVSTVTSTATTTAVSTVTVTKPVISTALIAGIVIIVIVIAIVAA
EEHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
IITLRRR
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA