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The map label for this gene is yurN [H]

Identifier: 15899772

GI number: 15899772

Start: 2823972

End: 2824829

Strand: Direct

Name: yurN [H]

Synonym: SSO3067

Alternate gene names: 15899772

Gene position: 2823972-2824829 (Clockwise)

Preceding gene: 15899771

Following gene: 15899773

Centisome position: 94.38

GC content: 32.17

Gene sequence:

>858_bases
ATGAGGAAAGGAGCCATCTTAATGTCTATACCGGGATTTATATTTGCAGCTTTTTTGATATACTTATTGGCTCTCAATGT
TTACTTTTCACTTTTGAATTGGTCATTATTTAATTTACAGCCGAGTTTTGCAGGTTTAGGCACTTATCAGACTTTATTTT
CAGAATACTTTTTTAGTTTAGCCGTTACTCATACAATTGTATATACTATAGCTGCTGTTGCAATAGGTAATATACTTGGA
ATACTGGGAGCTGGAATTTTATATTTTTTAAAGAGTAATACGAGAAGAGCCATTTACTTATCTGTATTTTTATATCCCTT
AGCTGTACCTTCTTCTACTTACGCCATAACTTGGCAGTGGTTATTTAATCCTCAAACTGGCATTAATTTAGTCTTAAGAA
TATTCCACTTCCCAAATATAATTTGGCTAACTACACAACCCACTATTTACGCAGGGATGATAATTATAGAAACATGGGCA
TATACTGGTTTAGCAGTGCTATTCTTTCTTGCTTCTTTTATGAGCGTGGATAAATCTATTATTGAGGCAGCTAAAATAGA
TGGTGCAAATAATTTTTATTTATTATTTAGGATCATATTACCAAACTCAATGAATGGACTAATAGTATCTACAGCTCTTC
TATTTCTATTCTCATTTAGAATATTTACTGTACCGTTTACTATAGGAGGTCCTACAAACCCAAATATGATGAGCCTAGTA
GAATATATTTACATTTTGTTTAGTACTGAGTATTTCTCTTTATCTTCAGCATTATCATCGTTAGTGGCATTAATAGCTGC
AGTAGTAATTATTCCTTACGCAATACTAGGTTTAAAAAGATGGGTGTTTAGAAGGTGA

Upstream 100 bases:

>100_bases
ATGTTATAAAGACATTCTTAAATAAGATAAACTTTTTTCAAATATATTTTTATCTAAATTTTTAACCTTTAATTTTACTT
TATACTTAGGTGTATAAGTA

Downstream 100 bases:

>100_bases
GGTAAAATGGAAAGATCTGTAAGTAAAGGCAGTTATATAACAAGTTCAATTAAGTATGCATTATTGGAAATAATAGCTGC
AATACTCGTTATCATGTGGT

Product: arabinose ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MRKGAILMSIPGFIFAAFLIYLLALNVYFSLLNWSLFNLQPSFAGLGTYQTLFSEYFFSLAVTHTIVYTIAAVAIGNILG
ILGAGILYFLKSNTRRAIYLSVFLYPLAVPSSTYAITWQWLFNPQTGINLVLRIFHFPNIIWLTTQPTIYAGMIIIETWA
YTGLAVLFFLASFMSVDKSIIEAAKIDGANNFYLLFRIILPNSMNGLIVSTALLFLFSFRIFTVPFTIGGPTNPNMMSLV
EYIYILFSTEYFSLSSALSSLVALIAAVVIIPYAILGLKRWVFRR

Sequences:

>Translated_285_residues
MRKGAILMSIPGFIFAAFLIYLLALNVYFSLLNWSLFNLQPSFAGLGTYQTLFSEYFFSLAVTHTIVYTIAAVAIGNILG
ILGAGILYFLKSNTRRAIYLSVFLYPLAVPSSTYAITWQWLFNPQTGINLVLRIFHFPNIIWLTTQPTIYAGMIIIETWA
YTGLAVLFFLASFMSVDKSIIEAAKIDGANNFYLLFRIILPNSMNGLIVSTALLFLFSFRIFTVPFTIGGPTNPNMMSLV
EYIYILFSTEYFSLSSALSSLVALIAAVVIIPYAILGLKRWVFRR
>Mature_285_residues
MRKGAILMSIPGFIFAAFLIYLLALNVYFSLLNWSLFNLQPSFAGLGTYQTLFSEYFFSLAVTHTIVYTIAAVAIGNILG
ILGAGILYFLKSNTRRAIYLSVFLYPLAVPSSTYAITWQWLFNPQTGINLVLRIFHFPNIIWLTTQPTIYAGMIIIETWA
YTGLAVLFFLASFMSVDKSIIEAAKIDGANNFYLLFRIILPNSMNGLIVSTALLFLFSFRIFTVPFTIGGPTNPNMMSLV
EYIYILFSTEYFSLSSALSSLVALIAAVVIIPYAILGLKRWVFRR

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31996; Mature: 31996

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGAILMSIPGFIFAAFLIYLLALNVYFSLLNWSLFNLQPSFAGLGTYQTLFSEYFFSL
CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHHHH
AVTHTIVYTIAAVAIGNILGILGAGILYFLKSNTRRAIYLSVFLYPLAVPSSTYAITWQW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCEEEEEEE
LFNPQTGINLVLRIFHFPNIIWLTTQPTIYAGMIIIETWAYTGLAVLFFLASFMSVDKSI
EECCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEAAKIDGANNFYLLFRIILPNSMNGLIVSTALLFLFSFRIFTVPFTIGGPTNPNMMSLV
HHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHH
EYIYILFSTEYFSLSSALSSLVALIAAVVIIPYAILGLKRWVFRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKGAILMSIPGFIFAAFLIYLLALNVYFSLLNWSLFNLQPSFAGLGTYQTLFSEYFFSL
CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHHHH
AVTHTIVYTIAAVAIGNILGILGAGILYFLKSNTRRAIYLSVFLYPLAVPSSTYAITWQW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCEEEEEEE
LFNPQTGINLVLRIFHFPNIIWLTTQPTIYAGMIIIETWAYTGLAVLFFLASFMSVDKSI
EECCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEAAKIDGANNFYLLFRIILPNSMNGLIVSTALLFLFSFRIFTVPFTIGGPTNPNMMSLV
HHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHH
EYIYILFSTEYFSLSSALSSLVALIAAVVIIPYAILGLKRWVFRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]