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The map label for this gene is 15899771

Identifier: 15899771

GI number: 15899771

Start: 2822074

End: 2823936

Strand: Direct

Name: 15899771

Synonym: SSO3066

Alternate gene names: NA

Gene position: 2822074-2823936 (Clockwise)

Preceding gene: 15899770

Following gene: 15899772

Centisome position: 94.31

GC content: 37.57

Gene sequence:

>1863_bases
ATGTCTAGGCGTAGATTATACAAGGCGATATCTAGAACAGCAATAATAATAATTGTAGTAGTAATCATAATTGCAGCAAT
TGCTGGAGGTCTTGCAGCATATTATAGCTCTAGCAAACCACCCGCTACCAGTACGAGTTTAACCAGTACGAGTAGCAGTT
TATCCGTGACGACTTCTTCTACAACTTCTACCTTATCTTCTATTACGACAACGACGTCAACTGCTTCATCATATGTAGTA
GACTTTATAAATCCGTGGGGTGCTGAAGACCCTGTAGGACTAAAATGGATTGGAGGAAATTTCTCAATTTACTACCCTGG
CTATTCAGTGCAATTCACATCATTACCAGGAGCTAGTGGTGTAGAGGAGAGGTATGTTGTAATTAACGATATTGAGGCTG
GTAAGCTACAGGGTATCTTTTGGGCTCATGGAGGCCCAGAAGTACTTTCCTATGTGGAACTATTACCTAGCCCCCACGAT
TTATACAATATGACCCCACTGTTAGCCCAAGAGGGATTATTCCAGAAGGGTGTCACGGAAGCACTTATGGCTATATCTTA
TAATGGTACAATATTCGGCTCTCCAACAAACGTGCACAGAGCAGAGGAGTTATACTTCAATCCTCAAATCCTTAAGAAAT
ACAATTTACCAATTCCTACCAATTTAAGTTTACTAATCTATGATACTCAACAATTAGAAGCACATGGAATAAATCCGTGG
GCAATGTCTGGCGCTGAAGGTGGATATGAACAATTACATTTGTGGTTCGCAATATTCCTATCTGTAGCTGCGCAATACTA
TGGAGCTGCAGGAGCTGCTAAATTATCAAATGAGTTAATGTATGGAGTGCTTAACTTAAATAACGTAACAGTTCAAAAGA
TTATTAACGAAACTGATAACGTATTCTTGCAGTTTGTAGGTCAAAGCAGTGTGATTCCGAGCTGGCAAAGTCAATCTATA
TGGTCCGCTTTAGCACTAGTAATAAAGGGACAAACTGTATTCGAAGCTGGTGGCAATTGGCTTGCTGAATACGCAGCTAT
ATGGTATAATACCACTACTTATCCTGCTACACAACCCTATCTAAACTGGTCCAATATTACACTAATGGCAATGCCATTCC
CTGGTACACAAGGTATTTACGTTATAGATATGGACTCTGTTGCAATACCTACTGTTAATAATCCACAAGAGCAAGCTGCT
ATAAATTTTGCAAAATTCTGGGCTTCTTATGAAGGACAGAAGATATGGACATACTACAAGGGTGTGTCAATATGGGCTAA
TTCAACAGATTACTATTCTACTCCAATGCAGTGGTATGATTATCAATCTTTACTAAATACGCCAGCACAGAACTTTACAT
GGGCGTTCGCTGATGGGACCCTATTTGATGATGTGTTCTACTTCCTAATAGCGCAAGAGTTGAATCTACAAGAGCAAGGT
TCATCGTATATTCCCACATTTAACGCAGCTCTATTCAAAGCTGAAAATATGACATTCCACGAATGGCAAATAGCTGCGAA
AGATGGTTTCGGCTTCGTGGGACAAAGAGGAAATCCATTTGGTAATTATCTACCACCATGGGTTAATCCAAGCACTTATA
CATATAATTCAAGTTATACTCCATCATTCTTACTAACACCACCTCACTATTTATTGCCATATCTTAAGAAACTTGGACAA
CAGCAATATGCTAATAAGGTTAATAGTGTAAATTACTATGCTATCAACGGTGTTAATTTATTACCATTTCCATTGCTAAT
CGTATTAATGATATATTTAGATCAAACTAGATATAAATATGTTATAAAGACATTCTTAAATAAGATAAACTTTTTTCAAA
TATATTTTTATCTAAATTTTTAA

Upstream 100 bases:

>100_bases
CCAATATGTTAACAAAACGTCTTTTACGGAAATATATAAATGTTAAACAAGTTAGGTATACTATTTATAAAATAGTTAGG
TCATAAAAGTACCCGAGAAT

Downstream 100 bases:

>100_bases
CCTTTAATTTTACTTTATACTTAGGTGTATAAGTAATGAGGAAAGGAGCCATCTTAATGTCTATACCGGGATTTATATTT
GCAGCTTTTTTGATATACTT

Product: arabinose ABC transporter arabinose-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 620; Mature: 619

Protein sequence:

>620_residues
MSRRRLYKAISRTAIIIIVVVIIIAAIAGGLAAYYSSSKPPATSTSLTSTSSSLSVTTSSTTSTLSSITTTTSTASSYVV
DFINPWGAEDPVGLKWIGGNFSIYYPGYSVQFTSLPGASGVEERYVVINDIEAGKLQGIFWAHGGPEVLSYVELLPSPHD
LYNMTPLLAQEGLFQKGVTEALMAISYNGTIFGSPTNVHRAEELYFNPQILKKYNLPIPTNLSLLIYDTQQLEAHGINPW
AMSGAEGGYEQLHLWFAIFLSVAAQYYGAAGAAKLSNELMYGVLNLNNVTVQKIINETDNVFLQFVGQSSVIPSWQSQSI
WSALALVIKGQTVFEAGGNWLAEYAAIWYNTTTYPATQPYLNWSNITLMAMPFPGTQGIYVIDMDSVAIPTVNNPQEQAA
INFAKFWASYEGQKIWTYYKGVSIWANSTDYYSTPMQWYDYQSLLNTPAQNFTWAFADGTLFDDVFYFLIAQELNLQEQG
SSYIPTFNAALFKAENMTFHEWQIAAKDGFGFVGQRGNPFGNYLPPWVNPSTYTYNSSYTPSFLLTPPHYLLPYLKKLGQ
QQYANKVNSVNYYAINGVNLLPFPLLIVLMIYLDQTRYKYVIKTFLNKINFFQIYFYLNF

Sequences:

>Translated_620_residues
MSRRRLYKAISRTAIIIIVVVIIIAAIAGGLAAYYSSSKPPATSTSLTSTSSSLSVTTSSTTSTLSSITTTTSTASSYVV
DFINPWGAEDPVGLKWIGGNFSIYYPGYSVQFTSLPGASGVEERYVVINDIEAGKLQGIFWAHGGPEVLSYVELLPSPHD
LYNMTPLLAQEGLFQKGVTEALMAISYNGTIFGSPTNVHRAEELYFNPQILKKYNLPIPTNLSLLIYDTQQLEAHGINPW
AMSGAEGGYEQLHLWFAIFLSVAAQYYGAAGAAKLSNELMYGVLNLNNVTVQKIINETDNVFLQFVGQSSVIPSWQSQSI
WSALALVIKGQTVFEAGGNWLAEYAAIWYNTTTYPATQPYLNWSNITLMAMPFPGTQGIYVIDMDSVAIPTVNNPQEQAA
INFAKFWASYEGQKIWTYYKGVSIWANSTDYYSTPMQWYDYQSLLNTPAQNFTWAFADGTLFDDVFYFLIAQELNLQEQG
SSYIPTFNAALFKAENMTFHEWQIAAKDGFGFVGQRGNPFGNYLPPWVNPSTYTYNSSYTPSFLLTPPHYLLPYLKKLGQ
QQYANKVNSVNYYAINGVNLLPFPLLIVLMIYLDQTRYKYVIKTFLNKINFFQIYFYLNF
>Mature_619_residues
SRRRLYKAISRTAIIIIVVVIIIAAIAGGLAAYYSSSKPPATSTSLTSTSSSLSVTTSSTTSTLSSITTTTSTASSYVVD
FINPWGAEDPVGLKWIGGNFSIYYPGYSVQFTSLPGASGVEERYVVINDIEAGKLQGIFWAHGGPEVLSYVELLPSPHDL
YNMTPLLAQEGLFQKGVTEALMAISYNGTIFGSPTNVHRAEELYFNPQILKKYNLPIPTNLSLLIYDTQQLEAHGINPWA
MSGAEGGYEQLHLWFAIFLSVAAQYYGAAGAAKLSNELMYGVLNLNNVTVQKIINETDNVFLQFVGQSSVIPSWQSQSIW
SALALVIKGQTVFEAGGNWLAEYAAIWYNTTTYPATQPYLNWSNITLMAMPFPGTQGIYVIDMDSVAIPTVNNPQEQAAI
NFAKFWASYEGQKIWTYYKGVSIWANSTDYYSTPMQWYDYQSLLNTPAQNFTWAFADGTLFDDVFYFLIAQELNLQEQGS
SYIPTFNAALFKAENMTFHEWQIAAKDGFGFVGQRGNPFGNYLPPWVNPSTYTYNSSYTPSFLLTPPHYLLPYLKKLGQQ
QYANKVNSVNYYAINGVNLLPFPLLIVLMIYLDQTRYKYVIKTFLNKINFFQIYFYLNF

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16 [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 69331; Mature: 69200

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRRLYKAISRTAIIIIVVVIIIAAIAGGLAAYYSSSKPPATSTSLTSTSSSLSVTTSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEECC
TTSTLSSITTTTSTASSYVVDFINPWGAEDPVGLKWIGGNFSIYYPGYSVQFTSLPGASG
CHHHHHHHEECCCCCCHHHEEECCCCCCCCCCCEEEECCCEEEEECCEEEEEECCCCCCC
VEERYVVINDIEAGKLQGIFWAHGGPEVLSYVELLPSPHDLYNMTPLLAQEGLFQKGVTE
CCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHCCCCHHHHCCCHHHHHCCHHHHHHHH
ALMAISYNGTIFGSPTNVHRAEELYFNPQILKKYNLPIPTNLSLLIYDTQQLEAHGINPW
HHHEEEECCEEECCCCCCCCHHHHCCCHHHHHHCCCCCCCCCEEEEEECHHHHHCCCCCC
AMSGAEGGYEQLHLWFAIFLSVAAQYYGAAGAAKLSNELMYGVLNLNNVTVQKIINETDN
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCCHHHHHHCCCCC
VFLQFVGQSSVIPSWQSQSIWSALALVIKGQTVFEAGGNWLAEYAAIWYNTTTYPATQPY
EEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHEECCCCCCCCCCC
LNWSNITLMAMPFPGTQGIYVIDMDSVAIPTVNNPQEQAAINFAKFWASYEGQKIWTYYK
EECCCEEEEEEECCCCCCEEEEEECCEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEC
GVSIWANSTDYYSTPMQWYDYQSLLNTPAQNFTWAFADGTLFDDVFYFLIAQELNLQEQG
CEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHCC
SSYIPTFNAALFKAENMTFHEWQIAAKDGFGFVGQRGNPFGNYLPPWVNPSTYTYNSSYT
CCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
PSFLLTPPHYLLPYLKKLGQQQYANKVNSVNYYAINGVNLLPFPLLIVLMIYLDQTRYKY
CEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHH
VIKTFLNKINFFQIYFYLNF
HHHHHHCCCCEEEEEEEEEC
>Mature Secondary Structure 
SRRRLYKAISRTAIIIIVVVIIIAAIAGGLAAYYSSSKPPATSTSLTSTSSSLSVTTSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEECC
TTSTLSSITTTTSTASSYVVDFINPWGAEDPVGLKWIGGNFSIYYPGYSVQFTSLPGASG
CHHHHHHHEECCCCCCHHHEEECCCCCCCCCCCEEEECCCEEEEECCEEEEEECCCCCCC
VEERYVVINDIEAGKLQGIFWAHGGPEVLSYVELLPSPHDLYNMTPLLAQEGLFQKGVTE
CCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHCCCCHHHHCCCHHHHHCCHHHHHHHH
ALMAISYNGTIFGSPTNVHRAEELYFNPQILKKYNLPIPTNLSLLIYDTQQLEAHGINPW
HHHEEEECCEEECCCCCCCCHHHHCCCHHHHHHCCCCCCCCCEEEEEECHHHHHCCCCCC
AMSGAEGGYEQLHLWFAIFLSVAAQYYGAAGAAKLSNELMYGVLNLNNVTVQKIINETDN
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCCHHHHHHCCCCC
VFLQFVGQSSVIPSWQSQSIWSALALVIKGQTVFEAGGNWLAEYAAIWYNTTTYPATQPY
EEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHEECCCCCCCCCCC
LNWSNITLMAMPFPGTQGIYVIDMDSVAIPTVNNPQEQAAINFAKFWASYEGQKIWTYYK
EECCCEEEEEEECCCCCCEEEEEECCEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEC
GVSIWANSTDYYSTPMQWYDYQSLLNTPAQNFTWAFADGTLFDDVFYFLIAQELNLQEQG
CEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHCC
SSYIPTFNAALFKAENMTFHEWQIAAKDGFGFVGQRGNPFGNYLPPWVNPSTYTYNSSYT
CCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
PSFLLTPPHYLLPYLKKLGQQQYANKVNSVNYYAINGVNLLPFPLLIVLMIYLDQTRYKY
CEEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHH
VIKTFLNKINFFQIYFYLNF
HHHHHHCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]