Click here to switch to the map view.

The map label for this gene is ycjP [C]

Identifier: 15899773

GI number: 15899773

Start: 2824836

End: 2825723

Strand: Direct

Name: ycjP [C]

Synonym: SSO3068

Alternate gene names: 15899773

Gene position: 2824836-2825723 (Clockwise)

Preceding gene: 15899772

Following gene: 15899774

Centisome position: 94.41

GC content: 36.94

Gene sequence:

>888_bases
ATGGAAAGATCTGTAAGTAAAGGCAGTTATATAACAAGTTCAATTAAGTATGCATTATTGGAAATAATAGCTGCAATACT
CGTTATCATGTGGTTGGTTCCGTTGTACGCTATGATTTTAGGGGGATTAAAATCCAATTTAGAAGCAGCTAGTACTCCGA
TACTCCTTCCTCCATCTAAGCCATCACTAGACGCGTACGCTTTTGCTTGGTTTGGATATGCAACTATTCCCGGATTGGAA
CCAACACTGTTAAGATATCTCCTTGTAGCCATACCATCCGTATTACTATCGGTAGTAATAGGGACGATGACTGCTTATTT
CTTCTTTGTACTTAGTGAGAAACATGGAATAATAAGCAATGGCTTATTTTCCATAATGGCCTTAGCAACCTTCCTTCCTA
TAGAAACAGTTACGTTTCCATTGATTGAGTTAGAGACTTCTCTAAACGTTTACAATACTTATATAGGGTTGATATTCGCT
ATGCTAATATTCTATGTACCGACTTCTGCGTTACTAATGTCAATATTTCTTCCCGTAGTTCCTAAGTACTTAATAGAATC
AGCTAGAATGGATGGAGCTGGAGACTGGACTATACTGTGGAGAGTAGTATTCCCATTGATATTCCCCGGATTCCTATCAA
CTTTAATATTCGTTTTCTTACAGATTTGGAATGAGTTCTTCATACCATTAATACTTACAAATACACCAAACATGTTAATG
TTACCGGTAGCAGCTAGATTCTATACTGCTGCCTATGCGTTAATTTATAATAGGTCGTTTGCAGCTGGAGTTATTTCTTC
CTTAATACCGTTAATAATATTTATATTTCTCGGAAGATATTTTATACGTGGATTAGCAGCATTAGGTGGAGGAGCTAAAG
GGGTGTAG

Upstream 100 bases:

>100_bases
TTCAGCATTATCATCGTTAGTGGCATTAATAGCTGCAGTAGTAATTATTCCTTACGCAATACTAGGTTTAAAAAGATGGG
TGTTTAGAAGGTGAGGTAAA

Downstream 100 bases:

>100_bases
AGATAATGACCACAATTAGAGTAGAAAATCTATCCAAAATATTCAAAAAAGGTAAAACAGAAGTAAAGGCAGTGGATAAT
GTGTCAATAACAATAGACTC

Product: arabinose ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MERSVSKGSYITSSIKYALLEIIAAILVIMWLVPLYAMILGGLKSNLEAASTPILLPPSKPSLDAYAFAWFGYATIPGLE
PTLLRYLLVAIPSVLLSVVIGTMTAYFFFVLSEKHGIISNGLFSIMALATFLPIETVTFPLIELETSLNVYNTYIGLIFA
MLIFYVPTSALLMSIFLPVVPKYLIESARMDGAGDWTILWRVVFPLIFPGFLSTLIFVFLQIWNEFFIPLILTNTPNMLM
LPVAARFYTAAYALIYNRSFAAGVISSLIPLIIFIFLGRYFIRGLAALGGGAKGV

Sequences:

>Translated_295_residues
MERSVSKGSYITSSIKYALLEIIAAILVIMWLVPLYAMILGGLKSNLEAASTPILLPPSKPSLDAYAFAWFGYATIPGLE
PTLLRYLLVAIPSVLLSVVIGTMTAYFFFVLSEKHGIISNGLFSIMALATFLPIETVTFPLIELETSLNVYNTYIGLIFA
MLIFYVPTSALLMSIFLPVVPKYLIESARMDGAGDWTILWRVVFPLIFPGFLSTLIFVFLQIWNEFFIPLILTNTPNMLM
LPVAARFYTAAYALIYNRSFAAGVISSLIPLIIFIFLGRYFIRGLAALGGGAKGV
>Mature_295_residues
MERSVSKGSYITSSIKYALLEIIAAILVIMWLVPLYAMILGGLKSNLEAASTPILLPPSKPSLDAYAFAWFGYATIPGLE
PTLLRYLLVAIPSVLLSVVIGTMTAYFFFVLSEKHGIISNGLFSIMALATFLPIETVTFPLIELETSLNVYNTYIGLIFA
MLIFYVPTSALLMSIFLPVVPKYLIESARMDGAGDWTILWRVVFPLIFPGFLSTLIFVFLQIWNEFFIPLILTNTPNMLM
LPVAARFYTAAYALIYNRSFAAGVISSLIPLIIFIFLGRYFIRGLAALGGGAKGV

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=158, Percent_Identity=32.2784810126582, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789860, Length=170, Percent_Identity=24.7058823529412, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32546; Mature: 32546

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSVSKGSYITSSIKYALLEIIAAILVIMWLVPLYAMILGGLKSNLEAASTPILLPPSK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCEEECCCC
PSLDAYAFAWFGYATIPGLEPTLLRYLLVAIPSVLLSVVIGTMTAYFFFVLSEKHGIISN
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
GLFSIMALATFLPIETVTFPLIELETSLNVYNTYIGLIFAMLIFYVPTSALLMSIFLPVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PKYLIESARMDGAGDWTILWRVVFPLIFPGFLSTLIFVFLQIWNEFFIPLILTNTPNMLM
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEE
LPVAARFYTAAYALIYNRSFAAGVISSLIPLIIFIFLGRYFIRGLAALGGGAKGV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MERSVSKGSYITSSIKYALLEIIAAILVIMWLVPLYAMILGGLKSNLEAASTPILLPPSK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCEEECCCC
PSLDAYAFAWFGYATIPGLEPTLLRYLLVAIPSVLLSVVIGTMTAYFFFVLSEKHGIISN
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
GLFSIMALATFLPIETVTFPLIELETSLNVYNTYIGLIFAMLIFYVPTSALLMSIFLPVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PKYLIESARMDGAGDWTILWRVVFPLIFPGFLSTLIFVFLQIWNEFFIPLILTNTPNMLM
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEE
LPVAARFYTAAYALIYNRSFAAGVISSLIPLIIFIFLGRYFIRGLAALGGGAKGV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]