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The map label for this gene is ydjK [H]

Identifier: 15899252

GI number: 15899252

Start: 2284524

End: 2285990

Strand: Direct

Name: ydjK [H]

Synonym: SSO2516

Alternate gene names: 15899252

Gene position: 2284524-2285990 (Clockwise)

Preceding gene: 15899249

Following gene: 15899253

Centisome position: 76.35

GC content: 39.33

Gene sequence:

>1467_bases
ATGTATAAAGCTAGAAAATTGACTTTCATAAGATATTTTTATGAATTAACTGGTGTAAGCACATCTATGAGTAGTAAATT
AGATGAATACCTAGCTAGGATAGATAGACTACCAACTTGGGGGCTATCATATGCAGTACTATGGGCACTAGGAATAGGTT
ATTTTGCCACCTTATATGACGCAGTATCGAATTTAGGTTACGCTTTGCCATTCATCCCTTTCATAAACGCAACTCAAGCT
TCAATTATCGTATCTGTGGGATTAGCAGGTTACATAGCTGGTTCGATAGGTTTTGGTGTTGCTTCAGATAGGATTGGTAG
GAGACCAATACTGATTACCACTTTTGCGCTTTTAGGAATTGGTAGTTTGGGTATGGGTTTAGCTACTAACTATTTCATGT
TGTTTATTTTTAGATTGCTAGAAGGTATAGGTATTGGAGCGGCTCTCAATTTAGCTATGGTCTATGTCGCAGAGTTTTCA
CCCAGTATGAAAAGAGGAAAATACGCAAATTGGATTTTCATCTCGGGGTGGACTGCGGTGGGAGTTGGTACGGTCGCCGC
AGCGTTCATCGTTACTATTAACCCTACAGTAGGCTGGAGAATAATTTTCCTTTTGCCTGCAGTTTTATCCCTTATGACTA
CCGTCGTTTTAACTATTTTATCTCCAGAAAGTGTTAGAATATTGGTAAAGAAAGGAAAAGTACAAGAGGTCGAGAAGATT
GTGAATAAGATGGAGGAGATAAGTATGAGGAGGGCTAGAATGGAATCACTTCCACAGCCTAAGATAATTCATTACGAAGA
GACTCCATCCTCTAGCCAATTGAAAATACTAAGAGAGTCGAAATATCTTAAGCGTCTAATTTCGCTCACGGTCTTCTGGT
TTTTCATCTACTTCATACAATACACATCTACAGGACTTGGTCCTACGTTCGTAAAAGTAGTGATTGGGTTTTCTACAGCT
CAATATGCAGAATACATTAGATTGTCAGGATTCGCAGCTATAGGAGCCACCATAGTTTCATTTATTTTATTAAGCGTAGT
TGAAAAGACAGATAGAAGGTTGCTGACCCAAATTGGAGGAATAGGGTTCCTAGTTAGCTCTTTTGTGTCCACATATTTAT
TGCTTAACAAGGAACTGATAGTCTGGTTTATAGCCTATTTTCTTCTTGAATTCGTTGTTAACCCGCCATACTTAGCTGGG
TATTTAATGAGTAGTGAAGCCTTCCCTACTGCAGCTAGATCAACAGCCTTTGCCATAACTGATGGTATAGGGCATTTAGG
TGGAGTCATTGGGCCTCTACTTTTATTTCCTTTAATAAGGATAATAGGTCCGTTACCAGCATGGGTAGTTTTAGGCCTTC
CAGTTCCATTTGCCGCAGCATTGTTATGGTTTACCATTCCGAAAACAGTAAAGGTTAGACTTGAGGAGGTTAATGAAGCA
TATAGAGAGGGTACTGCGCAAACATAG

Upstream 100 bases:

>100_bases
GGTCTTTATTCATAACTAAGGAAAGTAAAAATATTCAAAATTCTTTTCTAACTTCTGTATGGTATATATTATCCATAGCT
AGTATCTAATTATACAATTT

Downstream 100 bases:

>100_bases
CTAAATCCCTCCTCAAATTCAGTTAATTAAGACTTTAGAGAACTAATAGTGAAAGTTTCGTAAGATTAAATAGTAAAGTA
TATAGTGAGTCAAAAATATA

Product: sugar transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MYKARKLTFIRYFYELTGVSTSMSSKLDEYLARIDRLPTWGLSYAVLWALGIGYFATLYDAVSNLGYALPFIPFINATQA
SIIVSVGLAGYIAGSIGFGVASDRIGRRPILITTFALLGIGSLGMGLATNYFMLFIFRLLEGIGIGAALNLAMVYVAEFS
PSMKRGKYANWIFISGWTAVGVGTVAAAFIVTINPTVGWRIIFLLPAVLSLMTTVVLTILSPESVRILVKKGKVQEVEKI
VNKMEEISMRRARMESLPQPKIIHYEETPSSSQLKILRESKYLKRLISLTVFWFFIYFIQYTSTGLGPTFVKVVIGFSTA
QYAEYIRLSGFAAIGATIVSFILLSVVEKTDRRLLTQIGGIGFLVSSFVSTYLLLNKELIVWFIAYFLLEFVVNPPYLAG
YLMSSEAFPTAARSTAFAITDGIGHLGGVIGPLLLFPLIRIIGPLPAWVVLGLPVPFAAALLWFTIPKTVKVRLEEVNEA
YREGTAQT

Sequences:

>Translated_488_residues
MYKARKLTFIRYFYELTGVSTSMSSKLDEYLARIDRLPTWGLSYAVLWALGIGYFATLYDAVSNLGYALPFIPFINATQA
SIIVSVGLAGYIAGSIGFGVASDRIGRRPILITTFALLGIGSLGMGLATNYFMLFIFRLLEGIGIGAALNLAMVYVAEFS
PSMKRGKYANWIFISGWTAVGVGTVAAAFIVTINPTVGWRIIFLLPAVLSLMTTVVLTILSPESVRILVKKGKVQEVEKI
VNKMEEISMRRARMESLPQPKIIHYEETPSSSQLKILRESKYLKRLISLTVFWFFIYFIQYTSTGLGPTFVKVVIGFSTA
QYAEYIRLSGFAAIGATIVSFILLSVVEKTDRRLLTQIGGIGFLVSSFVSTYLLLNKELIVWFIAYFLLEFVVNPPYLAG
YLMSSEAFPTAARSTAFAITDGIGHLGGVIGPLLLFPLIRIIGPLPAWVVLGLPVPFAAALLWFTIPKTVKVRLEEVNEA
YREGTAQT
>Mature_488_residues
MYKARKLTFIRYFYELTGVSTSMSSKLDEYLARIDRLPTWGLSYAVLWALGIGYFATLYDAVSNLGYALPFIPFINATQA
SIIVSVGLAGYIAGSIGFGVASDRIGRRPILITTFALLGIGSLGMGLATNYFMLFIFRLLEGIGIGAALNLAMVYVAEFS
PSMKRGKYANWIFISGWTAVGVGTVAAAFIVTINPTVGWRIIFLLPAVLSLMTTVVLTILSPESVRILVKKGKVQEVEKI
VNKMEEISMRRARMESLPQPKIIHYEETPSSSQLKILRESKYLKRLISLTVFWFFIYFIQYTSTGLGPTFVKVVIGFSTA
QYAEYIRLSGFAAIGATIVSFILLSVVEKTDRRLLTQIGGIGFLVSSFVSTYLLLNKELIVWFIAYFLLEFVVNPPYLAG
YLMSSEAFPTAARSTAFAITDGIGHLGGVIGPLLLFPLIRIIGPLPAWVVLGLPVPFAAALLWFTIPKTVKVRLEEVNEA
YREGTAQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Homo sapiens, GI216548223, Length=195, Percent_Identity=28.2051282051282, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI7662270, Length=173, Percent_Identity=28.3236994219653, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI262399383, Length=173, Percent_Identity=28.3236994219653, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI21553331, Length=218, Percent_Identity=28.8990825688073, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1788074, Length=426, Percent_Identity=25.8215962441315, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1788068, Length=483, Percent_Identity=25.879917184265, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI87082159, Length=283, Percent_Identity=29.6819787985866, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87082231, Length=391, Percent_Identity=24.2966751918159, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786229, Length=354, Percent_Identity=22.5988700564972, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1789207, Length=448, Percent_Identity=25, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17554160, Length=362, Percent_Identity=24.0331491712707, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71985447, Length=363, Percent_Identity=25.3443526170799, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17555228, Length=383, Percent_Identity=25.065274151436, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17565976, Length=322, Percent_Identity=27.3291925465839, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17565978, Length=212, Percent_Identity=26.4150943396226, Blast_Score=69, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI32565921, Length=358, Percent_Identity=25.1396648044693, Blast_Score=68, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17542342, Length=429, Percent_Identity=24.4755244755245, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 53815; Mature: 53815

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKARKLTFIRYFYELTGVSTSMSSKLDEYLARIDRLPTWGLSYAVLWALGIGYFATLYD
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AVSNLGYALPFIPFINATQASIIVSVGLAGYIAGSIGFGVASDRIGRRPILITTFALLGI
HHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
GSLGMGLATNYFMLFIFRLLEGIGIGAALNLAMVYVAEFSPSMKRGKYANWIFISGWTAV
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHH
GVGTVAAAFIVTINPTVGWRIIFLLPAVLSLMTTVVLTILSPESVRILVKKGKVQEVEKI
HHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH
VNKMEEISMRRARMESLPQPKIIHYEETPSSSQLKILRESKYLKRLISLTVFWFFIYFIQ
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTSTGLGPTFVKVVIGFSTAQYAEYIRLSGFAAIGATIVSFILLSVVEKTDRRLLTQIGG
HHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
IGFLVSSFVSTYLLLNKELIVWFIAYFLLEFVVNPPYLAGYLMSSEAFPTAARSTAFAIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHCCCHHHHH
DGIGHLGGVIGPLLLFPLIRIIGPLPAWVVLGLPVPFAAALLWFTIPKTVKVRLEEVNEA
HCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
YREGTAQT
HHCCCCCC
>Mature Secondary Structure
MYKARKLTFIRYFYELTGVSTSMSSKLDEYLARIDRLPTWGLSYAVLWALGIGYFATLYD
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AVSNLGYALPFIPFINATQASIIVSVGLAGYIAGSIGFGVASDRIGRRPILITTFALLGI
HHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
GSLGMGLATNYFMLFIFRLLEGIGIGAALNLAMVYVAEFSPSMKRGKYANWIFISGWTAV
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHH
GVGTVAAAFIVTINPTVGWRIIFLLPAVLSLMTTVVLTILSPESVRILVKKGKVQEVEKI
HHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH
VNKMEEISMRRARMESLPQPKIIHYEETPSSSQLKILRESKYLKRLISLTVFWFFIYFIQ
HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTSTGLGPTFVKVVIGFSTAQYAEYIRLSGFAAIGATIVSFILLSVVEKTDRRLLTQIGG
HHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
IGFLVSSFVSTYLLLNKELIVWFIAYFLLEFVVNPPYLAGYLMSSEAFPTAARSTAFAIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHCCCHHHHH
DGIGHLGGVIGPLLLFPLIRIIGPLPAWVVLGLPVPFAAALLWFTIPKTVKVRLEEVNEA
HCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
YREGTAQT
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]