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The map label for this gene is ybjZ [C]

Identifier: 15897947

GI number: 15897947

Start: 938924

End: 940120

Strand: Direct

Name: ybjZ [C]

Synonym: SSO1080

Alternate gene names: 15897947

Gene position: 938924-940120 (Clockwise)

Preceding gene: 15897946

Following gene: 15897949

Centisome position: 31.38

GC content: 36.51

Gene sequence:

>1197_bases
ATGAAGATACTGGATTTTATATCTTATGCTTTAAACTCACTAAAAGAAAGAAAGGTTAGGGCAATACTTACTATCCTTGG
GATAGTTGTCGGACCTGCTACAATAATTTCTATAAACTCCATGGTATTGGGCTACTCACACACAATAATTTCGCAAATAT
CCAACTTTCTCTCACCCTATGATATTATCGTGACCCCCACTGGAAGGGGTCTGCCATTATCCCAATACCTCATACTCCAA
CTGGAGACTATCCTTGGAGTAAAAATGGTTATTCCATTCTATTCATTTCCGGCGTTAATTAGAACACCTAATGGCTATGA
AGGGGCAACAGTATTTGCGGTTAATATAAACCAGCTTAAGATAGCAGCTCCAGCTATAAGCTTATCATCAGGTTACTTTC
CAGCTGCGGAGGTTAGCTATGAAGCTTCAATAGGCTATCAGTTGGGAAATCCGCAAGGTGGATATAGTCCAATAAGACCA
AATCAAGTGATACAAACAATTATATTCTATAACGGGAATAATTTCACTAAGACATTTCTAGTAACTGGAGTTTTGAACGA
ATATGGAAGTTTTCTCGGAGTTGATATAGATAAGTCAATAATAGTACCTTTATCTTTTGGTCAGTCAATCTCAAGTTCTT
ATAGTGGAGCCATAATAATAGTGAGCTCTCTAGGAGAAGTGAATGAAGTTGTAAATGAAATAAAACAAAAGTTTGGAAAT
TCTTTAGATATTGTAGTGGCGGAGGAATTTATACAATTAATAGATAATACTTTACAATCTCTTAACGGATTGCTAGTATC
TGCAGGAGCTACGTCATTCATAGTTTCGTTTATGGGAGTAACTACAACAATGTTCACAACAGTGGTGGAAAGAACTAAGG
AGATAGGGATATTAAGAGCATTAGGATTTACTAGGTTTGATGTACTCACAATGTTTTTAGTTGAAGCTAGTGTGATGGGG
TTCATAGGTAGTATAACAGGGCTCGCATTAGGTTCAGTAGTTGCATTAATATTAACACAAGAACATTTCGGATTGGGATT
TAGTTTTCTAAAGGGTCTTTCAGTATCACCGGTCTATTCTCCTACCTTTATGTTGTTAGTGCTAATATTTTCTACAATTC
TAAGCGTCATTGCAGCACTAGGACCTGCTTACAATGCATCCAAACTAGATCCAAATAAAGCTTTAAGATACGAGTAG

Upstream 100 bases:

>100_bases
GTTCTCAAGGTAAAATATCAGCAACAACAATATTATTGATAGCGATGATAGTAATTCTCATAACTATTATAATATATTTG
AGTCTTAGAGGGTTACGCAA

Downstream 100 bases:

>100_bases
TTAGGAAAAAAGCTTACTAAAGAGTCTCTCCAGTTCTCTTATTTCATCTTCTGACAATTTGCTTAGAAAAGAAGATAAGA
CATTTAAGAAGATCTTCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MKILDFISYALNSLKERKVRAILTILGIVVGPATIISINSMVLGYSHTIISQISNFLSPYDIIVTPTGRGLPLSQYLILQ
LETILGVKMVIPFYSFPALIRTPNGYEGATVFAVNINQLKIAAPAISLSSGYFPAAEVSYEASIGYQLGNPQGGYSPIRP
NQVIQTIIFYNGNNFTKTFLVTGVLNEYGSFLGVDIDKSIIVPLSFGQSISSSYSGAIIIVSSLGEVNEVVNEIKQKFGN
SLDIVVAEEFIQLIDNTLQSLNGLLVSAGATSFIVSFMGVTTTMFTTVVERTKEIGILRALGFTRFDVLTMFLVEASVMG
FIGSITGLALGSVVALILTQEHFGLGFSFLKGLSVSPVYSPTFMLLVLIFSTILSVIAALGPAYNASKLDPNKALRYE

Sequences:

>Translated_398_residues
MKILDFISYALNSLKERKVRAILTILGIVVGPATIISINSMVLGYSHTIISQISNFLSPYDIIVTPTGRGLPLSQYLILQ
LETILGVKMVIPFYSFPALIRTPNGYEGATVFAVNINQLKIAAPAISLSSGYFPAAEVSYEASIGYQLGNPQGGYSPIRP
NQVIQTIIFYNGNNFTKTFLVTGVLNEYGSFLGVDIDKSIIVPLSFGQSISSSYSGAIIIVSSLGEVNEVVNEIKQKFGN
SLDIVVAEEFIQLIDNTLQSLNGLLVSAGATSFIVSFMGVTTTMFTTVVERTKEIGILRALGFTRFDVLTMFLVEASVMG
FIGSITGLALGSVVALILTQEHFGLGFSFLKGLSVSPVYSPTFMLLVLIFSTILSVIAALGPAYNASKLDPNKALRYE
>Mature_398_residues
MKILDFISYALNSLKERKVRAILTILGIVVGPATIISINSMVLGYSHTIISQISNFLSPYDIIVTPTGRGLPLSQYLILQ
LETILGVKMVIPFYSFPALIRTPNGYEGATVFAVNINQLKIAAPAISLSSGYFPAAEVSYEASIGYQLGNPQGGYSPIRP
NQVIQTIIFYNGNNFTKTFLVTGVLNEYGSFLGVDIDKSIIVPLSFGQSISSSYSGAIIIVSSLGEVNEVVNEIKQKFGN
SLDIVVAEEFIQLIDNTLQSLNGLLVSAGATSFIVSFMGVTTTMFTTVVERTKEIGILRALGFTRFDVLTMFLVEASVMG
FIGSITGLALGSVVALILTQEHFGLGFSFLKGLSVSPVYSPTFMLLVLIFSTILSVIAALGPAYNASKLDPNKALRYE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=148, Percent_Identity=33.1081081081081, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 42859; Mature: 42859

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILDFISYALNSLKERKVRAILTILGIVVGPATIISINSMVLGYSHTIISQISNFLSPY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHCCCC
DIIVTPTGRGLPLSQYLILQLETILGVKMVIPFYSFPALIRTPNGYEGATVFAVNINQLK
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCEEEEEEEECEEE
IAAPAISLSSGYFPAAEVSYEASIGYQLGNPQGGYSPIRPNQVIQTIIFYNGNNFTKTFL
EECCEEECCCCCCCCCCCEEEEEECEEECCCCCCCCCCCHHHHEEEEEEECCCCCEEHHH
VTGVLNEYGSFLGVDIDKSIIVPLSFGQSISSSYSGAIIIVSSLGEVNEVVNEIKQKFGN
HHHHHHHCCCEEECCCCCCEEEEEECCCHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCC
SLDIVVAEEFIQLIDNTLQSLNGLLVSAGATSFIVSFMGVTTTMFTTVVERTKEIGILRA
CEEEEHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFTRFDVLTMFLVEASVMGFIGSITGLALGSVVALILTQEHFGLGFSFLKGLSVSPVYS
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
PTFMLLVLIFSTILSVIAALGPAYNASKLDPNKALRYE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKILDFISYALNSLKERKVRAILTILGIVVGPATIISINSMVLGYSHTIISQISNFLSPY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHCCCC
DIIVTPTGRGLPLSQYLILQLETILGVKMVIPFYSFPALIRTPNGYEGATVFAVNINQLK
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCEEEEEEEECEEE
IAAPAISLSSGYFPAAEVSYEASIGYQLGNPQGGYSPIRPNQVIQTIIFYNGNNFTKTFL
EECCEEECCCCCCCCCCCEEEEEECEEECCCCCCCCCCCHHHHEEEEEEECCCCCEEHHH
VTGVLNEYGSFLGVDIDKSIIVPLSFGQSISSSYSGAIIIVSSLGEVNEVVNEIKQKFGN
HHHHHHHCCCEEECCCCCCEEEEEECCCHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCC
SLDIVVAEEFIQLIDNTLQSLNGLLVSAGATSFIVSFMGVTTTMFTTVVERTKEIGILRA
CEEEEHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFTRFDVLTMFLVEASVMGFIGSITGLALGSVVALILTQEHFGLGFSFLKGLSVSPVYS
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
PTFMLLVLIFSTILSVIAALGPAYNASKLDPNKALRYE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]