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The map label for this gene is gctA [C]

Identifier: 15897949

GI number: 15897949

Start: 940676

End: 941482

Strand: Direct

Name: gctA [C]

Synonym: SSO1083

Alternate gene names: 15897949

Gene position: 940676-941482 (Clockwise)

Preceding gene: 15897947

Following gene: 15897951

Centisome position: 31.44

GC content: 38.17

Gene sequence:

>807_bases
GTGGAGGAGGTATTTATATATATCTTTTTTGTAGAGATTATAAATATGGAAAGTAAACTTTTGAGTCTGGAAGAAGCAGT
GGAAGTAGTGAAGAAAGGAGATTCTGTTACAATAAGTGGTATAAGCATACATAGAAATCCTATGGCATTTATATATGCTT
TGGTGAAGAAGGGAGTTAGAGATCTGTATTTCATAGATAGAGAGCCTGGCTTTGGTCTTGAGGTCCTATTAAAATATGGA
TTGATAAGGAAATTGAGAATAGCCATGTCTACTTTAGAATGGTTCTCGAGTATTCCAAAGCATTTTAGGAAAATGACCGA
AGAAAGAGAGGTTGAAATATTGGAAGATACTTGTGGTGCTTTTATTGCTGGGATAAGAGCAGGGAGCTTCGGTATACCGT
TTATGCCGGTTAGGGGAATAATAGGGTCTGATCTAGTTAAAATTCATGAAAGAGAAGGTACATGGAAAGTTGTCGAGGAT
CCATTTAGTGGAGAGAAAGTTGTACTCGTAAAGGCTATCAACCCAGATGTTGCAATAATACATGTAAATAAGGCTGATGA
AGAGGGAAATGCGGAAATCCTAGGTCCACTATATGAAGATGAGTACAAGGCTAAAGCAGCCAAAAAGGTGATAATAACTG
CCGAAGAGATAGTTCCTAGATCTTACTTCTATGGTAGGAGACCGACTATTAATGGAGAATACGTTACTGCTGTGGTTCAC
GCACCAAAGGGTGCAGAGCCGACTAGTATGTTCCCACTTTATGATGCAGATTACGAGAAAATTATAGAGTTTCTAGAGCA
CTTCTAA

Upstream 100 bases:

>100_bases
TCATCATCACAAAAACTCACAAAATCCTATCTAAAAGGAAATATTTATATTACGTCTTCATTCTCTCTTCTCGTAAACGA
GAATTATATCCTAATTTTGA

Downstream 100 bases:

>100_bases
GGTTATAAGGATCCATATAATTAATGAATCTCAAATCTTCATCAGTTAGATCTATTAACCTTTCGCTATCTTTTCTCTTT
ACCTCAAAGTCAGTATTCTC

Product: glutaconate CoA-transferase, subunit A (gctA)

Products: acetate; glutaconyl-1-CoA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MEEVFIYIFFVEIINMESKLLSLEEAVEVVKKGDSVTISGISIHRNPMAFIYALVKKGVRDLYFIDREPGFGLEVLLKYG
LIRKLRIAMSTLEWFSSIPKHFRKMTEEREVEILEDTCGAFIAGIRAGSFGIPFMPVRGIIGSDLVKIHEREGTWKVVED
PFSGEKVVLVKAINPDVAIIHVNKADEEGNAEILGPLYEDEYKAKAAKKVIITAEEIVPRSYFYGRRPTINGEYVTAVVH
APKGAEPTSMFPLYDADYEKIIEFLEHF

Sequences:

>Translated_268_residues
MEEVFIYIFFVEIINMESKLLSLEEAVEVVKKGDSVTISGISIHRNPMAFIYALVKKGVRDLYFIDREPGFGLEVLLKYG
LIRKLRIAMSTLEWFSSIPKHFRKMTEEREVEILEDTCGAFIAGIRAGSFGIPFMPVRGIIGSDLVKIHEREGTWKVVED
PFSGEKVVLVKAINPDVAIIHVNKADEEGNAEILGPLYEDEYKAKAAKKVIITAEEIVPRSYFYGRRPTINGEYVTAVVH
APKGAEPTSMFPLYDADYEKIIEFLEHF
>Mature_268_residues
MEEVFIYIFFVEIINMESKLLSLEEAVEVVKKGDSVTISGISIHRNPMAFIYALVKKGVRDLYFIDREPGFGLEVLLKYG
LIRKLRIAMSTLEWFSSIPKHFRKMTEEREVEILEDTCGAFIAGIRAGSFGIPFMPVRGIIGSDLVKIHEREGTWKVVED
PFSGEKVVLVKAINPDVAIIHVNKADEEGNAEILGPLYEDEYKAKAAKKVIITAEEIVPRSYFYGRRPTINGEYVTAVVH
APKGAEPTSMFPLYDADYEKIIEFLEHF

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG1788

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: 2.8.3.12

Molecular weight: Translated: 30369; Mature: 30369

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEVFIYIFFVEIINMESKLLSLEEAVEVVKKGDSVTISGISIHRNPMAFIYALVKKGVR
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHCCH
DLYFIDREPGFGLEVLLKYGLIRKLRIAMSTLEWFSSIPKHFRKMTEEREVEILEDTCGA
HEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIAGIRAGSFGIPFMPVRGIIGSDLVKIHEREGTWKVVEDPFSGEKVVLVKAINPDVAII
HHHHHCCCCCCCCCHHHCCCCCCHHHEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEE
HVNKADEEGNAEILGPLYEDEYKAKAAKKVIITAEEIVPRSYFYGRRPTINGEYVTAVVH
EEECCCCCCCCEEECCCHHHHHHHHHHHEEEEEHHHHCCCHHHCCCCCCCCCCEEEEEEE
APKGAEPTSMFPLYDADYEKIIEFLEHF
CCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MEEVFIYIFFVEIINMESKLLSLEEAVEVVKKGDSVTISGISIHRNPMAFIYALVKKGVR
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHCCH
DLYFIDREPGFGLEVLLKYGLIRKLRIAMSTLEWFSSIPKHFRKMTEEREVEILEDTCGA
HEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIAGIRAGSFGIPFMPVRGIIGSDLVKIHEREGTWKVVEDPFSGEKVVLVKAINPDVAII
HHHHHCCCCCCCCCHHHCCCCCCHHHEEECCCCCEEEEECCCCCCEEEEEEECCCCEEEE
HVNKADEEGNAEILGPLYEDEYKAKAAKKVIITAEEIVPRSYFYGRRPTINGEYVTAVVH
EEECCCCCCCCEEECCCHHHHHHHHHHHEEEEEHHHHCCCHHHCCCCCCCCCCEEEEEEE
APKGAEPTSMFPLYDADYEKIIEFLEHF
CCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acetyl-CoA; (E)-glutaconate

Specific reaction: acetyl-CoA + (E)-glutaconate = acetate + glutaconyl-1-CoA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]