| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is 15897946
Identifier: 15897946
GI number: 15897946
Start: 936420
End: 938927
Strand: Direct
Name: 15897946
Synonym: SSO1079
Alternate gene names: NA
Gene position: 936420-938927 (Clockwise)
Preceding gene: 15897945
Following gene: 15897947
Centisome position: 31.29
GC content: 34.89
Gene sequence:
>2508_bases ATGAGGAATAGGTTGATAATTATCTTATTGTTACTTTCATTAACTCTCCCAATAATTCCAGTAAACTCACAGAGTACTGT TGTCATATCCAGTTGGGGGTGGGGAACACCACAAAATCCAATAAGGGTACATCCGGGTTATAATGATACGCCATTTTATG TTATAGCCTCACAGCCATTGGGATACCAGATTATTTACGCATATTTGGTTCTATCAGGAACGCCAATAACATCTGAAGGA GGAAATACCATAGCTTATGGTTCAGTGACCTCATCGTCCTTAACAACTTCTCAAATAATGTTCTTCCTCGATGTAAGTAA TAACGCTAAACCGGGGACATATAATGTACCACTAGTAGTAGTATATCAGAACGCAGTCACTGGTTTGGAAAACCAAATAG TTCAAGAGATAACTATACCCATTTATAATGTAACCTTTCCAATTTTAGATCAAGTATTTTGGGGAACTACAGAACAATTA ATATTTGCTCAAGTAGGAGAAGGCTTAATACCTCTTACCTTTAGCGTTTTTAATCCCACGACGGAACCCATGTTAAACGT AACCTTAAACGTAGTCTTACCCAAGGGAATATTTACCCAAAGTGGTAGTAGAGATTTAACAGTTACAATTCCAGCCTTAC CTGCTGGAGAACCAATATTCGTATCTTCAATAGTAAATGTAAGTAACCTTGTTAAACCGGGAGTGTATAGTCTTAATTAT TCCTTTTCATTTACGAACTTTCTAGAATATTTCTACAAGCAAGAATCAAATAAAAGTATAAATATAACAATATATCCTCA AGCCAAGATTAACATTTTTTCCGATCCCATCCAGTCAACTCCAGATAATATAACTACACTCGTAATAGGAATTTCAACTA ACGTTAGTAGCTTTATAATTAGTGTAAAGCCAGAATTGCCCTCAAGCTTCCTACCAATATCCTCAAACTTTACGTCTACT TCTCTATCACCGGGAGAAAAAGTAATATATGCTTTCAAGATTTACATACCTCAAGGGGTAATACCCTCAATATACCCTAT ACCAATAGAGGTTAATTACAGTGCATTGGACCAAAAGCTAGCAGTAGTTTATCTAACATATGCAAATATCTACTATAATG AAACTCCTAGGGTAGTTGAGGCAATTTGGAATACTACGATAACTCCATTTCCAGGGATAGGGACAATCCCCTTAACATTG GTTATCTATAATCCATTACCAATACCAATAACTGGTGTTAATATTACATACAAATTTCCTAATGGTGTATTTCCTTTACA GCCATTCATTTTTTTACCTGGAATTCCTCAGTATTCTTCTGTACCAATAACTATCCCAGTGGAAATAACGCCAAATGCCT CAGTAGGCGTACTCAATTTCACTTATAAGATTTCTTACAATCAAGATAAAACTGTTGATGGCGTAAATAATATTTATGTT TTGCCCCCTGCTCCAGTGATAATTGAGGCTAATCAAACAGTGATAGGCAATGGAGAGTATGCGGTAGTTCCAATTAATGT TGTGAACCTTGGAGTGGAATATGTTTATAACGTAAATCTAATAACCCTCACACAAGGCTTAGAGATAATTACATCTGTAA ATAATACGGTTCCCTTTATAAAGCCCAACTCATCAGCAACATTTTATTATACATTATACGCTCCACAAGATTTACCACCA GCTATGTATCCGCTAGTAATTAAATTGACATATACCTATTTTACCAATGAAATAGTGAGGACGTTTACAATTCCAGTTCT AGTAACTTCGTCACAATCACCAATACTTATATCATTCCTTAAAACCACGCTTTATTATAACACAAACAACACCGAGATCT TAGCAATTCAAAACCTAGCTAACTTTACGATATATAACATAAGGCTTGACTTAAATTACCCCTCACAAGAAATTTACCTC TCACAAAACCAGCTTTACATTCCATATCTTCCTTCTCACTTAATTTATACTGTCCCATTATATGTTATACCACAAATTCC ACAAACAACGTCAATACCTATCGTAGTTACCCTCAACTACGTATTAGGCCAAGGTTCTCCACAGACCTATCAATATCAAT TAAACTTACTCAGCACGGGATTCGTTAAAATGGAGATAACGCAAGTTTCCGCACAGATTGTAAATGATACAGTGGTAATT AGCGGGTTATTAATAAATACTGGATCACAAAATGCACAATATGTAACAATATCCGCTAATAACTATTCCTCAATTTATAT TGGAAACGTACCCCCAAATAGTCCAACACCGTTCTCTTTTACTTTAACGTTGCCTCCGGGTTTATACAAGTTCAATATTA GTGTAAACTACGAAAATGAGTTATATCAACCTAATATGACATTTTATACATTTTCTTACGTTGTATCTTATCCAACGTCA ACCAGTTCTCAAGGTAAAATATCAGCAACAACAATATTATTGATAGCGATGATAGTAATTCTCATAACTATTATAATATA TTTGAGTCTTAGAGGGTTACGCAAATGA
Upstream 100 bases:
>100_bases TTAAAACTACGATAGCAGTAGTAACACATGATAGAGAAGTTGCGAGTTATACAAAGAGAAAGATATACATTAGAGATGGA AAGATAGTTGGTGAAGAAAG
Downstream 100 bases:
>100_bases AGATACTGGATTTTATATCTTATGCTTTAAACTCACTAAAAGAAAGAAAGGTTAGGGCAATACTTACTATCCTTGGGATA GTTGTCGGACCTGCTACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 835; Mature: 835
Protein sequence:
>835_residues MRNRLIIILLLLSLTLPIIPVNSQSTVVISSWGWGTPQNPIRVHPGYNDTPFYVIASQPLGYQIIYAYLVLSGTPITSEG GNTIAYGSVTSSSLTTSQIMFFLDVSNNAKPGTYNVPLVVVYQNAVTGLENQIVQEITIPIYNVTFPILDQVFWGTTEQL IFAQVGEGLIPLTFSVFNPTTEPMLNVTLNVVLPKGIFTQSGSRDLTVTIPALPAGEPIFVSSIVNVSNLVKPGVYSLNY SFSFTNFLEYFYKQESNKSINITIYPQAKINIFSDPIQSTPDNITTLVIGISTNVSSFIISVKPELPSSFLPISSNFTST SLSPGEKVIYAFKIYIPQGVIPSIYPIPIEVNYSALDQKLAVVYLTYANIYYNETPRVVEAIWNTTITPFPGIGTIPLTL VIYNPLPIPITGVNITYKFPNGVFPLQPFIFLPGIPQYSSVPITIPVEITPNASVGVLNFTYKISYNQDKTVDGVNNIYV LPPAPVIIEANQTVIGNGEYAVVPINVVNLGVEYVYNVNLITLTQGLEIITSVNNTVPFIKPNSSATFYYTLYAPQDLPP AMYPLVIKLTYTYFTNEIVRTFTIPVLVTSSQSPILISFLKTTLYYNTNNTEILAIQNLANFTIYNIRLDLNYPSQEIYL SQNQLYIPYLPSHLIYTVPLYVIPQIPQTTSIPIVVTLNYVLGQGSPQTYQYQLNLLSTGFVKMEITQVSAQIVNDTVVI SGLLINTGSQNAQYVTISANNYSSIYIGNVPPNSPTPFSFTLTLPPGLYKFNISVNYENELYQPNMTFYTFSYVVSYPTS TSSQGKISATTILLIAMIVILITIIIYLSLRGLRK
Sequences:
>Translated_835_residues MRNRLIIILLLLSLTLPIIPVNSQSTVVISSWGWGTPQNPIRVHPGYNDTPFYVIASQPLGYQIIYAYLVLSGTPITSEG GNTIAYGSVTSSSLTTSQIMFFLDVSNNAKPGTYNVPLVVVYQNAVTGLENQIVQEITIPIYNVTFPILDQVFWGTTEQL IFAQVGEGLIPLTFSVFNPTTEPMLNVTLNVVLPKGIFTQSGSRDLTVTIPALPAGEPIFVSSIVNVSNLVKPGVYSLNY SFSFTNFLEYFYKQESNKSINITIYPQAKINIFSDPIQSTPDNITTLVIGISTNVSSFIISVKPELPSSFLPISSNFTST SLSPGEKVIYAFKIYIPQGVIPSIYPIPIEVNYSALDQKLAVVYLTYANIYYNETPRVVEAIWNTTITPFPGIGTIPLTL VIYNPLPIPITGVNITYKFPNGVFPLQPFIFLPGIPQYSSVPITIPVEITPNASVGVLNFTYKISYNQDKTVDGVNNIYV LPPAPVIIEANQTVIGNGEYAVVPINVVNLGVEYVYNVNLITLTQGLEIITSVNNTVPFIKPNSSATFYYTLYAPQDLPP AMYPLVIKLTYTYFTNEIVRTFTIPVLVTSSQSPILISFLKTTLYYNTNNTEILAIQNLANFTIYNIRLDLNYPSQEIYL SQNQLYIPYLPSHLIYTVPLYVIPQIPQTTSIPIVVTLNYVLGQGSPQTYQYQLNLLSTGFVKMEITQVSAQIVNDTVVI SGLLINTGSQNAQYVTISANNYSSIYIGNVPPNSPTPFSFTLTLPPGLYKFNISVNYENELYQPNMTFYTFSYVVSYPTS TSSQGKISATTILLIAMIVILITIIIYLSLRGLRK >Mature_835_residues MRNRLIIILLLLSLTLPIIPVNSQSTVVISSWGWGTPQNPIRVHPGYNDTPFYVIASQPLGYQIIYAYLVLSGTPITSEG GNTIAYGSVTSSSLTTSQIMFFLDVSNNAKPGTYNVPLVVVYQNAVTGLENQIVQEITIPIYNVTFPILDQVFWGTTEQL IFAQVGEGLIPLTFSVFNPTTEPMLNVTLNVVLPKGIFTQSGSRDLTVTIPALPAGEPIFVSSIVNVSNLVKPGVYSLNY SFSFTNFLEYFYKQESNKSINITIYPQAKINIFSDPIQSTPDNITTLVIGISTNVSSFIISVKPELPSSFLPISSNFTST SLSPGEKVIYAFKIYIPQGVIPSIYPIPIEVNYSALDQKLAVVYLTYANIYYNETPRVVEAIWNTTITPFPGIGTIPLTL VIYNPLPIPITGVNITYKFPNGVFPLQPFIFLPGIPQYSSVPITIPVEITPNASVGVLNFTYKISYNQDKTVDGVNNIYV LPPAPVIIEANQTVIGNGEYAVVPINVVNLGVEYVYNVNLITLTQGLEIITSVNNTVPFIKPNSSATFYYTLYAPQDLPP AMYPLVIKLTYTYFTNEIVRTFTIPVLVTSSQSPILISFLKTTLYYNTNNTEILAIQNLANFTIYNIRLDLNYPSQEIYL SQNQLYIPYLPSHLIYTVPLYVIPQIPQTTSIPIVVTLNYVLGQGSPQTYQYQLNLLSTGFVKMEITQVSAQIVNDTVVI SGLLINTGSQNAQYVTISANNYSSIYIGNVPPNSPTPFSFTLTLPPGLYKFNISVNYENELYQPNMTFYTFSYVVSYPTS TSSQGKISATTILLIAMIVILITIIIYLSLRGLRK
Specific function: Unknown
COG id: COG1361
COG function: function code M; S-layer domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92359; Mature: 92359
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNRLIIILLLLSLTLPIIPVNSQSTVVISSWGWGTPQNPIRVHPGYNDTPFYVIASQPL CCCCEEEEEEHHHHHCCEEEECCCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEECCCC GYQIIYAYLVLSGTPITSEGGNTIAYGSVTSSSLTTSQIMFFLDVSNNAKPGTYNVPLVV CHHEEEEEEEEECCCEECCCCCEEEECCCCCCCCEEEEEEEEEEECCCCCCCEECCEEEE VYQNAVTGLENQIVQEITIPIYNVTFPILDQVFWGTTEQLIFAQVGEGLIPLTFSVFNPT EEECCCCCHHHHHHHHEEEEEEEEEHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEECCCC TEPMLNVTLNVVLPKGIFTQSGSRDLTVTIPALPAGEPIFVSSIVNVSNLVKPGVYSLNY CCCEEEEEEEEEEECCEEECCCCCEEEEEEECCCCCCCEEEEEHHCHHHHCCCCEEEEEE SFSFTNFLEYFYKQESNKSINITIYPQAKINIFSDPIQSTPDNITTLVIGISTNVSSFII EEEHHHHHHHHHHCCCCCEEEEEEEECEEEEEECCCCCCCCCCEEEEEEEEECCCEEEEE SVKPELPSSFLPISSNFTSTSLSPGEKVIYAFKIYIPQGVIPSIYPIPIEVNYSALDQKL EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEHHHHCCEE AVVYLTYANIYYNETPRVVEAIWNTTITPFPGIGTIPLTLVIYNPLPIPITGVNITYKFP EEEEEEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECC NGVFPLQPFIFLPGIPQYSSVPITIPVEITPNASVGVLNFTYKISYNQDKTVDGVNNIYV CCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCEEE LPPAPVIIEANQTVIGNGEYAVVPINVVNLGVEYVYNVNLITLTQGLEIITSVNNTVPFI ECCCCEEEECCCEEECCCCEEEEEEEEEEECEEEEEEEEEEEEECCCEEEEECCCCCCEE KPNSSATFYYTLYAPQDLPPAMYPLVIKLTYTYFTNEIVRTFTIPVLVTSSQSPILISFL ECCCCEEEEEEEECCCCCCCCCCEEEEEEEEEHHHHHEEEEEEEEEEEECCCCCEEEEEE KTTLYYNTNNTEILAIQNLANFTIYNIRLDLNYPSQEIYLSQNQLYIPYLPSHLIYTVPL EEEEEEECCCCEEEEEECCCCEEEEEEEEEECCCCCEEEEECCCEEEEECCCCEEEEEEE YVIPQIPQTTSIPIVVTLNYVLGQGSPQTYQYQLNLLSTGFVKMEITQVSAQIVNDTVVI EEECCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEECCEEEEEEEEEEHHHHCCEEEE SGLLINTGSQNAQYVTISANNYSSIYIGNVPPNSPTPFSFTLTLPPGLYKFNISVNYENE EEEEEECCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEEECCC LYQPNMTFYTFSYVVSYPTSTSSQGKISATTILLIAMIVILITIIIYLSLRGLRK EECCCCEEEEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRNRLIIILLLLSLTLPIIPVNSQSTVVISSWGWGTPQNPIRVHPGYNDTPFYVIASQPL CCCCEEEEEEHHHHHCCEEEECCCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEECCCC GYQIIYAYLVLSGTPITSEGGNTIAYGSVTSSSLTTSQIMFFLDVSNNAKPGTYNVPLVV CHHEEEEEEEEECCCEECCCCCEEEECCCCCCCCEEEEEEEEEEECCCCCCCEECCEEEE VYQNAVTGLENQIVQEITIPIYNVTFPILDQVFWGTTEQLIFAQVGEGLIPLTFSVFNPT EEECCCCCHHHHHHHHEEEEEEEEEHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEECCCC TEPMLNVTLNVVLPKGIFTQSGSRDLTVTIPALPAGEPIFVSSIVNVSNLVKPGVYSLNY CCCEEEEEEEEEEECCEEECCCCCEEEEEEECCCCCCCEEEEEHHCHHHHCCCCEEEEEE SFSFTNFLEYFYKQESNKSINITIYPQAKINIFSDPIQSTPDNITTLVIGISTNVSSFII EEEHHHHHHHHHHCCCCCEEEEEEEECEEEEEECCCCCCCCCCEEEEEEEEECCCEEEEE SVKPELPSSFLPISSNFTSTSLSPGEKVIYAFKIYIPQGVIPSIYPIPIEVNYSALDQKL EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEHHHHCCEE AVVYLTYANIYYNETPRVVEAIWNTTITPFPGIGTIPLTLVIYNPLPIPITGVNITYKFP EEEEEEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECC NGVFPLQPFIFLPGIPQYSSVPITIPVEITPNASVGVLNFTYKISYNQDKTVDGVNNIYV CCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCEEE LPPAPVIIEANQTVIGNGEYAVVPINVVNLGVEYVYNVNLITLTQGLEIITSVNNTVPFI ECCCCEEEECCCEEECCCCEEEEEEEEEEECEEEEEEEEEEEEECCCEEEEECCCCCCEE KPNSSATFYYTLYAPQDLPPAMYPLVIKLTYTYFTNEIVRTFTIPVLVTSSQSPILISFL ECCCCEEEEEEEECCCCCCCCCCEEEEEEEEEHHHHHEEEEEEEEEEEECCCCCEEEEEE KTTLYYNTNNTEILAIQNLANFTIYNIRLDLNYPSQEIYLSQNQLYIPYLPSHLIYTVPL EEEEEEECCCCEEEEEECCCCEEEEEEEEEECCCCCEEEEECCCEEEEECCCCEEEEEEE YVIPQIPQTTSIPIVVTLNYVLGQGSPQTYQYQLNLLSTGFVKMEITQVSAQIVNDTVVI EEECCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEECCEEEEEEEEEEHHHHCCEEEE SGLLINTGSQNAQYVTISANNYSSIYIGNVPPNSPTPFSFTLTLPPGLYKFNISVNYENE EEEEEECCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEEECCC LYQPNMTFYTFSYVVSYPTSTSSQGKISATTILLIAMIVILITIIIYLSLRGLRK EECCCCEEEEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA