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The map label for this gene is ybcL [C]

Identifier: 15897669

GI number: 15897669

Start: 652597

End: 653070

Strand: Direct

Name: ybcL [C]

Synonym: SSO0767

Alternate gene names: 15897669

Gene position: 652597-653070 (Clockwise)

Preceding gene: 15897668

Following gene: 15897670

Centisome position: 21.81

GC content: 34.81

Gene sequence:

>474_bases
TTGAATAGTGAAAGTATATATTCGATGAGAGTAGTATCTTCAGCCTTTAAGAATGAGGATTTTATACCTATTAAATATAC
TTGTGATGGACAAGATCTGTCTCCGGAGTTAGAGTGGGATCTTGTTACTAACGCTAAAAGTTATGCGATAATCGTAGAAG
ATCCAGATGCGCCTGGAGGAACTTTCATACATTGGGTAATATACAACATAACTACCAATAGATTGCCAGAAGGAGTGCCA
AGACTGTACAAATCACAATATGGTGTACAAGGTGTAAACGATTTTGGGAATATAGGGTATAACGGTCCGTGTCCTCCTAA
GACACATCCACCTCATAGATATTATTTTTATGTTTATGCAATTGATACAATACTACTTGAAATTAAAAATATTAATGCTG
ATAAGTTAAAATCACTAATGGAGGGACATGGGATAGAGAGAGGATTCGTAATGGGTAAATATAAGAGAAAATAA

Upstream 100 bases:

>100_bases
TCCTTTACGGGTACAGGTGTTATAGTAGCAAAAATTCACAGTAAAGGACACGAGGAATTAGAGTTCTACTTAAATAAGAA
GATGTGAAGCGTTTTTAATT

Downstream 100 bases:

>100_bases
TTTCACTTATGTGGTGAGATAATGAGCACGAAGGTCGAAGAAATACTTTGGGCTGAAAAATATAGACCTAAGACGTTAGA
TGATATAGTAAATCAAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNSESIYSMRVVSSAFKNEDFIPIKYTCDGQDLSPELEWDLVTNAKSYAIIVEDPDAPGGTFIHWVIYNITTNRLPEGVP
RLYKSQYGVQGVNDFGNIGYNGPCPPKTHPPHRYYFYVYAIDTILLEIKNINADKLKSLMEGHGIERGFVMGKYKRK

Sequences:

>Translated_157_residues
MNSESIYSMRVVSSAFKNEDFIPIKYTCDGQDLSPELEWDLVTNAKSYAIIVEDPDAPGGTFIHWVIYNITTNRLPEGVP
RLYKSQYGVQGVNDFGNIGYNGPCPPKTHPPHRYYFYVYAIDTILLEIKNINADKLKSLMEGHGIERGFVMGKYKRK
>Mature_157_residues
MNSESIYSMRVVSSAFKNEDFIPIKYTCDGQDLSPELEWDLVTNAKSYAIIVEDPDAPGGTFIHWVIYNITTNRLPEGVP
RLYKSQYGVQGVNDFGNIGYNGPCPPKTHPPHRYYFYVYAIDTILLEIKNINADKLKSLMEGHGIERGFVMGKYKRK

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=122, Percent_Identity=38.5245901639344, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1786990, Length=141, Percent_Identity=36.8794326241135, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 17904; Mature: 17904

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSESIYSMRVVSSAFKNEDFIPIKYTCDGQDLSPELEWDLVTNAKSYAIIVEDPDAPGG
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCCCC
TFIHWVIYNITTNRLPEGVPRLYKSQYGVQGVNDFGNIGYNGPCPPKTHPPHRYYFYVYA
CEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
IDTILLEIKNINADKLKSLMEGHGIERGFVMGKYKRK
EEEHHEECCCCCHHHHHHHHHHCCCCCCEEECEECCC
>Mature Secondary Structure
MNSESIYSMRVVSSAFKNEDFIPIKYTCDGQDLSPELEWDLVTNAKSYAIIVEDPDAPGG
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCCCC
TFIHWVIYNITTNRLPEGVPRLYKSQYGVQGVNDFGNIGYNGPCPPKTHPPHRYYFYVYA
CEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
IDTILLEIKNINADKLKSLMEGHGIERGFVMGKYKRK
EEEHHEECCCCCHHHHHHHHHHCCCCCCEEECEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]