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The map label for this gene is rpl15E [H]

Identifier: 15897643

GI number: 15897643

Start: 630134

End: 630784

Strand: Reverse

Name: rpl15E [H]

Synonym: SSO0742

Alternate gene names: 15897643

Gene position: 630784-630134 (Counterclockwise)

Preceding gene: 15897645

Following gene: 15897642

Centisome position: 21.08

GC content: 37.02

Gene sequence:

>651_bases
ATGGCATTATCAATGTATCACTATATAGAGAATACATGGAATTCAGAAGAGTGGAAAAAAAGTGTATTAAGGCAAAGACT
TATCAAATGGAGAAAAGAACCTTCGATAGTTAGGTTAGCTAAACCAACTAGGCTAAATAGGGCTAGAAGTTTAGGCTATA
AGGCTAAGCAAGGGTTTGTTATAGTTAGAGTTAGAGTTAGAAGAGGAGGTCTAAATAAGCCTAGACCAAATAAGGGTAGA
AGGCCAAAAAGAATGGGTGTTTATGGTTATAGTCCAGCTAAAGGATATAGATGGATAGCTGAGGAAAGGGCTGCAAGGAA
ATATCCCAATTTAGAGGTACTTGGTAGTTATTATGTTGGAGAGGATGGTCTCTATAAGTATTATGAGATCGTCATGGTGG
ATCCTTCTCACCCGGTAATAAAGAGTGATCCTAAGCATAAGTGGCTTCAAGATCCTAGCAATAGAAATAGAGTATTTAGA
GGTCTAACGTCTGCAGGTAAGAAGGTCAGGGGATTGAGGAAATCTAGAGGACTTAAGGGTACCGTAAGATATAAGTGGAA
TAGAAAACAGAAGGAAAGAGAAGAAAAGAAAAGACATGAGGCAAGTAAGTATTATAAATTACAAGAGTATGATAAAATAC
CAGGAAAGTAA

Upstream 100 bases:

>100_bases
ACCCACATTGGTCTTTCCTATAATTCCAATGGTAATCATATGTTCTGATTTAGTGGACACATTTATTAATTAGATGCTTA
GCATAGTATTTTGAGAATAG

Downstream 100 bases:

>100_bases
GTATGAAAATAAATCAAGCAATAATTTCAGTTTTTATTCATGAGACTGAGGATTACAATAAAATAGTAAATACTATAGAG
AGTTTTTTCTCTCCTCTTAT

Product: 50S ribosomal protein L15e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MALSMYHYIENTWNSEEWKKSVLRQRLIKWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKGR
RPKRMGVYGYSPAKGYRWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIVMVDPSHPVIKSDPKHKWLQDPSNRNRVFR
GLTSAGKKVRGLRKSRGLKGTVRYKWNRKQKEREEKKRHEASKYYKLQEYDKIPGK

Sequences:

>Translated_216_residues
MALSMYHYIENTWNSEEWKKSVLRQRLIKWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKGR
RPKRMGVYGYSPAKGYRWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIVMVDPSHPVIKSDPKHKWLQDPSNRNRVFR
GLTSAGKKVRGLRKSRGLKGTVRYKWNRKQKEREEKKRHEASKYYKLQEYDKIPGK
>Mature_215_residues
ALSMYHYIENTWNSEEWKKSVLRQRLIKWRKEPSIVRLAKPTRLNRARSLGYKAKQGFVIVRVRVRRGGLNKPRPNKGRR
PKRMGVYGYSPAKGYRWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIVMVDPSHPVIKSDPKHKWLQDPSNRNRVFRG
LTSAGKKVRGLRKSRGLKGTVRYKWNRKQKEREEKKRHEASKYYKLQEYDKIPGK

Specific function: Unknown

COG id: COG1632

COG function: function code J; Ribosomal protein L15E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15e family [H]

Homologues:

Organism=Homo sapiens, GI15431293, Length=195, Percent_Identity=40.5128205128205, Blast_Score=143, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17541432, Length=205, Percent_Identity=40.4878048780488, Blast_Score=114, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6323057, Length=183, Percent_Identity=42.0765027322404, Blast_Score=138, Evalue=6e-34,
Organism=Saccharomyces cerevisiae, GI6323769, Length=160, Percent_Identity=45, Blast_Score=136, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000439
- InterPro:   IPR020926
- InterPro:   IPR020925
- InterPro:   IPR012678 [H]

Pfam domain/function: PF00827 Ribosomal_L15e [H]

EC number: NA

Molecular weight: Translated: 25727; Mature: 25596

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: PS01194 RIBOSOMAL_L15E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSMYHYIENTWNSEEWKKSVLRQRLIKWRKEPSIVRLAKPTRLNRARSLGYKAKQGFV
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCEE
IVRVRVRRGGLNKPRPNKGRRPKRMGVYGYSPAKGYRWIAEERAARKYPNLEVLGSYYVG
EEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEC
EDGLYKYYEIVMVDPSHPVIKSDPKHKWLQDPSNRNRVFRGLTSAGKKVRGLRKSRGLKG
CCCCEEEEEEEEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
TVRYKWNRKQKEREEKKRHEASKYYKLQEYDKIPGK
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ALSMYHYIENTWNSEEWKKSVLRQRLIKWRKEPSIVRLAKPTRLNRARSLGYKAKQGFV
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCEE
IVRVRVRRGGLNKPRPNKGRRPKRMGVYGYSPAKGYRWIAEERAARKYPNLEVLGSYYVG
EEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEC
EDGLYKYYEIVMVDPSHPVIKSDPKHKWLQDPSNRNRVFRGLTSAGKKVRGLRKSRGLKG
CCCCEEEEEEEEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
TVRYKWNRKQKEREEKKRHEASKYYKLQEYDKIPGK
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA