Click here to switch to the map view.

The map label for this gene is 15897642

Identifier: 15897642

GI number: 15897642

Start: 629682

End: 630131

Strand: Reverse

Name: 15897642

Synonym: SSO0741

Alternate gene names: NA

Gene position: 630131-629682 (Counterclockwise)

Preceding gene: 15897643

Following gene: 15897641

Centisome position: 21.06

GC content: 28.0

Gene sequence:

>450_bases
ATGAAAATAAATCAAGCAATAATTTCAGTTTTTATTCATGAGACTGAGGATTACAATAAAATAGTAAATACTATAGAGAG
TTTTTTCTCTCCTCTTATCTCTAACTCAAAGAAAAATGTTACAACTGCTCAAGGTCATTACGGTAATAAAATAATTATAT
TGGAATACAGATTTGATAGGAAGAGTGGGGAGCAATTTTTTAAAATAATATTGGAGAAAATTGAAACATCAGAACTAATG
CTTATTCTTACAACTATAGATTCTCATATAGATGGAAGTAAGTTATATTTGAGATTCGATAAACAATATTTAATTGCTGA
GCATAGACTTGTTCTTAAAGAGGGCGATGATGTCATTAAATGTATAATTTCGTTTAATACTTCCTTGGAGAATATAAAGG
AGGAGATAAAGAAACTTGTTAATAGTCGAATCATGCATTCTAAACTCTAA

Upstream 100 bases:

>100_bases
AGTGGAATAGAAAACAGAAGGAAAGAGAAGAAAAGAAAAGACATGAGGCAAGTAAGTATTATAAATTACAAGAGTATGAT
AAAATACCAGGAAAGTAAGT

Downstream 100 bases:

>100_bases
GCTGTTTCCTTATGCAAAAAGGCTAGGTTATAATACGATTTTTAGTGAAGATGGTTTAGTTGGTATAAAAAGAGTTACTA
TAAAAGTAGAAAATGGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKINQAIISVFIHETEDYNKIVNTIESFFSPLISNSKKNVTTAQGHYGNKIIILEYRFDRKSGEQFFKIILEKIETSELM
LILTTIDSHIDGSKLYLRFDKQYLIAEHRLVLKEGDDVIKCIISFNTSLENIKEEIKKLVNSRIMHSKL

Sequences:

>Translated_149_residues
MKINQAIISVFIHETEDYNKIVNTIESFFSPLISNSKKNVTTAQGHYGNKIIILEYRFDRKSGEQFFKIILEKIETSELM
LILTTIDSHIDGSKLYLRFDKQYLIAEHRLVLKEGDDVIKCIISFNTSLENIKEEIKKLVNSRIMHSKL
>Mature_149_residues
MKINQAIISVFIHETEDYNKIVNTIESFFSPLISNSKKNVTTAQGHYGNKIIILEYRFDRKSGEQFFKIILEKIETSELM
LILTTIDSHIDGSKLYLRFDKQYLIAEHRLVLKEGDDVIKCIISFNTSLENIKEEIKKLVNSRIMHSKL

Specific function: Unknown

COG id: COG1325

COG function: function code J; Predicted exosome subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022803
- InterPro:   IPR002739 [H]

Pfam domain/function: PF01877 DUF54 [H]

EC number: NA

Molecular weight: Translated: 17367; Mature: 17367

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINQAIISVFIHETEDYNKIVNTIESFFSPLISNSKKNVTTAQGHYGNKIIILEYRFDR
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEEEECCC
KSGEQFFKIILEKIETSELMLILTTIDSHIDGSKLYLRFDKQYLIAEHRLVLKEGDDVIK
CCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHCCCHHHH
CIISFNTSLENIKEEIKKLVNSRIMHSKL
HHHHCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKINQAIISVFIHETEDYNKIVNTIESFFSPLISNSKKNVTTAQGHYGNKIIILEYRFDR
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEEEEEECCC
KSGEQFFKIILEKIETSELMLILTTIDSHIDGSKLYLRFDKQYLIAEHRLVLKEGDDVIK
CCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHCCCHHHH
CIISFNTSLENIKEEIKKLVNSRIMHSKL
HHHHCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]