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The map label for this gene is atpH [H]

Identifier: 15893161

GI number: 15893161

Start: 1145733

End: 1146287

Strand: Reverse

Name: atpH [H]

Synonym: RC1238

Alternate gene names: 15893161

Gene position: 1146287-1145733 (Counterclockwise)

Preceding gene: 15893162

Following gene: 161723840

Centisome position: 90.35

GC content: 24.68

Gene sequence:

>555_bases
ATGAACAAAGGTAATTTAATCAAGAATTATGCAGTAGCGTTATTAAATAACGCTATGGTTGATAATATACAAGATAAGAT
CTTTGAAGAAATTACTTCTATAAACCGTATAATTACCGATAATTTTGATATTAGAGAGTTCCTATTTTCTCCTATAGTAA
ATAAGAACGACAAAATTAACGCAGTCAATTCATTAGCAAAAAATATCAAAATTAGCACAATAGTACAAAATTTTTTATTG
TTATTGGTAAAAAATTCTCGTACTGCTATTTTATCTAATATAGTAGATGCTTATAATACTTTACTATATGAAAGTAAAAA
CATAAAGATAGTTCAGGTTATTTCTGCAAATAAATTACAACCTAAAGAGCAGGAGTGGATTAAATCTCGTATAGAAAAAG
AATTAAATCAAACAACAGAAATATTATTTGATATAGATAATACTATTATTGGCGGTATTATAATTAAATATGATAGTATG
TTGCAAGATTACTCAATAAAAGGTAGTTTAGAGAAAATAAAGAAAGCTTTAAAGATAGTTAATATTGCTGTATAG

Upstream 100 bases:

>100_bases
AAGTATATGCTCCGCTCCTTGCCTTATAGACTCCTTGCTCTTGTTGAAGTTGATCTTCGTATATACGTTTCATTTTACTT
CGGAGATATAAATTAAGAAA

Downstream 100 bases:

>100_bases
ATATTTATATAGTCATTGCGAGGAAATTACGAAGTAATTGACAAAGCAGTCTCAGGATATTTTATAAGATTGCCATGAGG
CCTACGGCTGCTCGCAATGA

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNKGNLIKNYAVALLNNAMVDNIQDKIFEEITSINRIITDNFDIREFLFSPIVNKNDKINAVNSLAKNIKISTIVQNFLL
LLVKNSRTAILSNIVDAYNTLLYESKNIKIVQVISANKLQPKEQEWIKSRIEKELNQTTEILFDIDNTIIGGIIIKYDSM
LQDYSIKGSLEKIKKALKIVNIAV

Sequences:

>Translated_184_residues
MNKGNLIKNYAVALLNNAMVDNIQDKIFEEITSINRIITDNFDIREFLFSPIVNKNDKINAVNSLAKNIKISTIVQNFLL
LLVKNSRTAILSNIVDAYNTLLYESKNIKIVQVISANKLQPKEQEWIKSRIEKELNQTTEILFDIDNTIIGGIIIKYDSM
LQDYSIKGSLEKIKKALKIVNIAV
>Mature_184_residues
MNKGNLIKNYAVALLNNAMVDNIQDKIFEEITSINRIITDNFDIREFLFSPIVNKNDKINAVNSLAKNIKISTIVQNFLL
LLVKNSRTAILSNIVDAYNTLLYESKNIKIVQVISANKLQPKEQEWIKSRIEKELNQTTEILFDIDNTIIGGIIIKYDSM
LQDYSIKGSLEKIKKALKIVNIAV

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

Organism=Caenorhabditis elegans, GI71984710, Length=170, Percent_Identity=25.2941176470588, Blast_Score=71, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71984717, Length=171, Percent_Identity=25.1461988304094, Blast_Score=70, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24647054, Length=164, Percent_Identity=25.609756097561, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 20957; Mature: 20957

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKGNLIKNYAVALLNNAMVDNIQDKIFEEITSINRIITDNFDIREFLFSPIVNKNDKIN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH
AVNSLAKNIKISTIVQNFLLLLVKNSRTAILSNIVDAYNTLLYESKNIKIVQVISANKLQ
HHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
PKEQEWIKSRIEKELNQTTEILFDIDNTIIGGIIIKYDSMLQDYSIKGSLEKIKKALKIV
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
NIAV
HHCC
>Mature Secondary Structure
MNKGNLIKNYAVALLNNAMVDNIQDKIFEEITSINRIITDNFDIREFLFSPIVNKNDKIN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH
AVNSLAKNIKISTIVQNFLLLLVKNSRTAILSNIVDAYNTLLYESKNIKIVQVISANKLQ
HHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
PKEQEWIKSRIEKELNQTTEILFDIDNTIIGGIIIKYDSMLQDYSIKGSLEKIKKALKIV
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
NIAV
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA