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The map label for this gene is 15892042

Identifier: 15892042

GI number: 15892042

Start: 117285

End: 117941

Strand: Reverse

Name: 15892042

Synonym: RC0119

Alternate gene names: NA

Gene position: 117941-117285 (Counterclockwise)

Preceding gene: 15892043

Following gene: 15892041

Centisome position: 9.3

GC content: 30.75

Gene sequence:

>657_bases
ATGCGGAAAGTTTTTAAAAAATTTTTAAAAAATAATAAATACGTACTTAGTATAATTACTATTTTACTATATTGGTATTT
GCGTTTTGTTTACTTTACTTCAAAGCAGAAATTTATATTTTACGATAACGGCAATAAGGAAAAATTCCTAAACGAACAAG
GGGTAATCTTTGCATTTTGGCATAATATGCTTGCCTTAAGTCCGTCTATGTTTATAGGACATAAAAATATCTATGCTTTA
ATATCACCGCATTTAGACGGAAAAATTTTAAACGATCTAGTAGGAAAATTCGGTTGCAGAGTGATAGTAGGTTCTACTAA
TAAAAATCCAATTGGAGCTTTACGTAATATTATAGGTAAGTTATCTCAAGGTGCAAATATAATAGTCACGCCGGACGGTC
CTAAAGGACCGGTATATAAAGTAAATAGCGGTATTACCGAAATTGCCTATAGATATAACACAAAACTTATTACTATAGTC
AGCTCCACTTCTAGATGTTTCAGATTAAAAAGTTGGGATAAATTAATAATACCCCTACCGTTTGGTACCATTAAAATCAT
AGTTGGCTCGCCTTTAGAACTCACAAATGATAAAATACAAAACCATATAAGCCTTGAACAACAATTAGCAAGCTTAACAG
AAAGTTTAAAGAAATGA

Upstream 100 bases:

>100_bases
ACAATTTCGTCAAATATCCTGAGATTGCTTCGTCACTTACTTCGTAATTTCCTCGCAATGACGGAAAAGTTAAAAAGCCA
CCTAAATCAACAAAAAAATA

Downstream 100 bases:

>100_bases
TGTTATTATATTATGCTTTAAGCTTTATATTATTACCTGTTTATTTTATCATAATTCTTATACGTTTATTAATAGGTAAA
GAAGATATAAGACGCATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MRKVFKKFLKNNKYVLSIITILLYWYLRFVYFTSKQKFIFYDNGNKEKFLNEQGVIFAFWHNMLALSPSMFIGHKNIYAL
ISPHLDGKILNDLVGKFGCRVIVGSTNKNPIGALRNIIGKLSQGANIIVTPDGPKGPVYKVNSGITEIAYRYNTKLITIV
SSTSRCFRLKSWDKLIIPLPFGTIKIIVGSPLELTNDKIQNHISLEQQLASLTESLKK

Sequences:

>Translated_218_residues
MRKVFKKFLKNNKYVLSIITILLYWYLRFVYFTSKQKFIFYDNGNKEKFLNEQGVIFAFWHNMLALSPSMFIGHKNIYAL
ISPHLDGKILNDLVGKFGCRVIVGSTNKNPIGALRNIIGKLSQGANIIVTPDGPKGPVYKVNSGITEIAYRYNTKLITIV
SSTSRCFRLKSWDKLIIPLPFGTIKIIVGSPLELTNDKIQNHISLEQQLASLTESLKK
>Mature_218_residues
MRKVFKKFLKNNKYVLSIITILLYWYLRFVYFTSKQKFIFYDNGNKEKFLNEQGVIFAFWHNMLALSPSMFIGHKNIYAL
ISPHLDGKILNDLVGKFGCRVIVGSTNKNPIGALRNIIGKLSQGANIIVTPDGPKGPVYKVNSGITEIAYRYNTKLITIV
SSTSRCFRLKSWDKLIIPLPFGTIKIIVGSPLELTNDKIQNHISLEQQLASLTESLKK

Specific function: Unknown

COG id: COG2121

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.pylori HP0270 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007172
- ProDom:   PD032436 [H]

Pfam domain/function: PF04028 DUF374 [H]

EC number: NA

Molecular weight: Translated: 24789; Mature: 24789

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVFKKFLKNNKYVLSIITILLYWYLRFVYFTSKQKFIFYDNGNKEKFLNEQGVIFAFW
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCEEEEHH
HNMLALSPSMFIGHKNIYALISPHLDGKILNDLVGKFGCRVIVGSTNKNPIGALRNIIGK
HHHHHCCCHHEECCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
LSQGANIIVTPDGPKGPVYKVNSGITEIAYRYNTKLITIVSSTSRCFRLKSWDKLIIPLP
HCCCCEEEEECCCCCCCEEEECCCHHHHHEEECCEEEEEEECCCCEEEECCCCEEEEECC
FGTIKIIVGSPLELTNDKIQNHISLEQQLASLTESLKK
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKVFKKFLKNNKYVLSIITILLYWYLRFVYFTSKQKFIFYDNGNKEKFLNEQGVIFAFW
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCEEEEHH
HNMLALSPSMFIGHKNIYALISPHLDGKILNDLVGKFGCRVIVGSTNKNPIGALRNIIGK
HHHHHCCCHHEECCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
LSQGANIIVTPDGPKGPVYKVNSGITEIAYRYNTKLITIVSSTSRCFRLKSWDKLIIPLP
HCCCCEEEEECCCCCCCEEEECCCHHHHHEEECCEEEEEEECCCCEEEECCCCEEEEECC
FGTIKIIVGSPLELTNDKIQNHISLEQQLASLTESLKK
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]