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The map label for this gene is ompW [C]

Identifier: 15892028

GI number: 15892028

Start: 100056

End: 100790

Strand: Reverse

Name: ompW [C]

Synonym: RC0105

Alternate gene names: 15892028

Gene position: 100790-100056 (Counterclockwise)

Preceding gene: 15892033

Following gene: 15892027

Centisome position: 7.94

GC content: 34.15

Gene sequence:

>735_bases
ATGTTAAGAATAGTGAAAAAATTAGGGATAATTTTGTTTGTATCCACCATAAGTATTAATAGTTTTGCTAAAAGCATGTA
TGATGATGTAGACTCTGCTTCTGACTATGATAGTACACCGTATTACGAAAACGAAGGCAGTTTAGTTTTCAAGATGCGTC
TAGGAGGTGTTGTTTCAAGTGCTAAGCAAAAAGGATTACCTACTCCTACCTCTCCTCAACCTGTTTCAGTAGGAGAAGTG
GCAAAAAACGGTTATGGAGGTGATGCGTCCACTACTATATTCTTTAATAATTATTTAGCTACTGAATTATCACTTGGCTT
TAATGTTTTACGCACTAAATATACATCCCTTGCAGCCGTTGCTCATAATTATGGCGTTGATAATGTTAAACTAGGAAAAC
ACAAACCTATTTATATGATTCCTGCAACAATTACCGGACAATTTCATATAGCTCCTTACGGTGGAATAAGACCATATATA
GGTATAGGTTATCACGGTTCTTATATGCTTACTCAAGCTACCGGTCTTAAAATTAGAAACGGACACGGTGCCGTAGGACA
AATAGGTGTAGATTTTTATGCTAAAGACGATACTTTAATCAATATTGACGTAAGACAATTTTTCTTAAATCCTAAACTTG
AGTATAAACCGAATTTAGTAGGTAATAAAACCATGACCTCTAAAGTTAAACTTAATCCTTTAATAGTGTCTATAGGTATA
GGATTTACTTTTTAG

Upstream 100 bases:

>100_bases
AAAAGAATTCTATCTTTTATGACAATGGTATAAATATATAAACAAAAATTTTATATAATAATACGGTAATCAATTTTAAG
CAAGTAAAGGTTATAATTAT

Downstream 100 bases:

>100_bases
CCTTGTTGCATGGTTCTTGAAGCGTATTTGTCATCCCGCGACTTGATATCGCGGGATCCAGTTTTTTTATTTTTTTTGGA
TACCGTGGTCAAGCCGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MLRIVKKLGIILFVSTISINSFAKSMYDDVDSASDYDSTPYYENEGSLVFKMRLGGVVSSAKQKGLPTPTSPQPVSVGEV
AKNGYGGDASTTIFFNNYLATELSLGFNVLRTKYTSLAAVAHNYGVDNVKLGKHKPIYMIPATITGQFHIAPYGGIRPYI
GIGYHGSYMLTQATGLKIRNGHGAVGQIGVDFYAKDDTLINIDVRQFFLNPKLEYKPNLVGNKTMTSKVKLNPLIVSIGI
GFTF

Sequences:

>Translated_244_residues
MLRIVKKLGIILFVSTISINSFAKSMYDDVDSASDYDSTPYYENEGSLVFKMRLGGVVSSAKQKGLPTPTSPQPVSVGEV
AKNGYGGDASTTIFFNNYLATELSLGFNVLRTKYTSLAAVAHNYGVDNVKLGKHKPIYMIPATITGQFHIAPYGGIRPYI
GIGYHGSYMLTQATGLKIRNGHGAVGQIGVDFYAKDDTLINIDVRQFFLNPKLEYKPNLVGNKTMTSKVKLNPLIVSIGI
GFTF
>Mature_244_residues
MLRIVKKLGIILFVSTISINSFAKSMYDDVDSASDYDSTPYYENEGSLVFKMRLGGVVSSAKQKGLPTPTSPQPVSVGEV
AKNGYGGDASTTIFFNNYLATELSLGFNVLRTKYTSLAAVAHNYGVDNVKLGKHKPIYMIPATITGQFHIAPYGGIRPYI
GIGYHGSYMLTQATGLKIRNGHGAVGQIGVDFYAKDDTLINIDVRQFFLNPKLEYKPNLVGNKTMTSKVKLNPLIVSIGI
GFTF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 26567; Mature: 26567

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIVKKLGIILFVSTISINSFAKSMYDDVDSASDYDSTPYYENEGSLVFKMRLGGVVSS
CHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHH
AKQKGLPTPTSPQPVSVGEVAKNGYGGDASTTIFFNNYLATELSLGFNVLRTKYTSLAAV
HHHCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCEEEEHHHCCHHHHHHHHHHHHHH
AHNYGVDNVKLGKHKPIYMIPATITGQFHIAPYGGIRPYIGIGYHGSYMLTQATGLKIRN
HHHCCCCCEEECCCCCEEEEEEEEECEEEEEECCCCCCEEEECCCCCEEEEEECCEEEEC
GHGAVGQIGVDFYAKDDTLINIDVRQFFLNPKLEYKPNLVGNKTMTSKVKLNPLIVSIGI
CCCCEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECEEEEEEEC
GFTF
CCCC
>Mature Secondary Structure
MLRIVKKLGIILFVSTISINSFAKSMYDDVDSASDYDSTPYYENEGSLVFKMRLGGVVSS
CHHHHHHCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHH
AKQKGLPTPTSPQPVSVGEVAKNGYGGDASTTIFFNNYLATELSLGFNVLRTKYTSLAAV
HHHCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCEEEEHHHCCHHHHHHHHHHHHHH
AHNYGVDNVKLGKHKPIYMIPATITGQFHIAPYGGIRPYIGIGYHGSYMLTQATGLKIRN
HHHCCCCCEEECCCCCEEEEEEEEECEEEEEECCCCCCEEEECCCCCEEEEEECCEEEEC
GHGAVGQIGVDFYAKDDTLINIDVRQFFLNPKLEYKPNLVGNKTMTSKVKLNPLIVSIGI
CCCCEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECEEEEEEEC
GFTF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA