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The map label for this gene is 158425505

Identifier: 158425505

GI number: 158425505

Start: 4431741

End: 4431959

Strand: Direct

Name: 158425505

Synonym: AZC_3881

Alternate gene names: NA

Gene position: 4431741-4431959 (Clockwise)

Preceding gene: 158425501

Following gene: 158425525

Centisome position: 82.53

GC content: 62.56

Gene sequence:

>219_bases
ATGGATATGCGCAAGCTGGTCGGCCGGAACTTCGCGCGCCTGCGTCAGGAGAAGGGCCTGACACAGGAGGACGTACAGAC
GCGATCCGGCTTCAGCCAGCAGTACATCAGCGGGCTCGAACGCGGCCGGCGCAATCCCACTGTCATCACGCTCTATGAAC
TGGCACAGGCGCTGGGCGTTAGCCACGAAGAGCTTGTTCGGCCTGACGGCAAGGACTGA

Upstream 100 bases:

>100_bases
AACACATCGAATCCGGTGTTCGTGCGCCTTGGCCGCAAAGCGATCCTATACATACTATAGTTGATAATCTCGGAGGGCGT
AAATTGCGATCCGTCTGCGC

Downstream 100 bases:

>100_bases
ACCCCGGAGGGGAAGCACCGGCCGAAACCGCCCGATGCGTTGCGCGGCTCGCCCGCCGCGCCGGCCGCGAAGGGGGCGAC
CAAATCAGCGAAAAGGTATT

Product: HTH-type transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MDMRKLVGRNFARLRQEKGLTQEDVQTRSGFSQQYISGLERGRRNPTVITLYELAQALGVSHEELVRPDGKD

Sequences:

>Translated_72_residues
MDMRKLVGRNFARLRQEKGLTQEDVQTRSGFSQQYISGLERGRRNPTVITLYELAQALGVSHEELVRPDGKD
>Mature_72_residues
MDMRKLVGRNFARLRQEKGLTQEDVQTRSGFSQQYISGLERGRRNPTVITLYELAQALGVSHEELVRPDGKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8247; Mature: 8247

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMRKLVGRNFARLRQEKGLTQEDVQTRSGFSQQYISGLERGRRNPTVITLYELAQALGV
CCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHCC
SHEELVRPDGKD
CHHHHCCCCCCC
>Mature Secondary Structure
MDMRKLVGRNFARLRQEKGLTQEDVQTRSGFSQQYISGLERGRRNPTVITLYELAQALGV
CCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHCC
SHEELVRPDGKD
CHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]