Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is xlnD [H]

Identifier: 158425167

GI number: 158425167

Start: 4069000

End: 4070160

Strand: Reverse

Name: xlnD [H]

Synonym: AZC_3543

Alternate gene names: 158425167

Gene position: 4070160-4069000 (Counterclockwise)

Preceding gene: 158425168

Following gene: 158425159

Centisome position: 75.8

GC content: 73.04

Gene sequence:

>1161_bases
TTGGGCCAGACCTCGCCCGCCAGTGCGCTCATCGTCGGTGCCGGCATCGGCGGTCTGGCGTGCGGCATCGCCCTGCGCCG
GGCGGGCCTCGCCGTGCGCATGGTGGAGCAGGCGGACGAGCTTGCCGAAGTGGGCGCCGGCCTTCAGCTGACGCCCAACG
CCACCCGTCACCTGCGCGATTTCGGCGTGCTCGATGCGCTGGAGACGGTCGCCGTGAAGCCGCGCGCCCTTGAGGTGCGG
GACGGCCAGACCTTCGGCCTGCTGGCCCGCTGCGACTATGCGCCTGCCGTCGCGAAATACGGTGCGCCCTTCCTCGTGCT
GCACCGGGCCGACTTGCAGAAGGCCCTGGCCGACGGCGCGAAGGCTGCGGGGTGCGACATCCTGCTTGGGGCCCGGCTGC
AAAGCCTCGACACCCATGGCGACAATCTGCGCGCTGTGGCGGAGCAGGAGGCCGGCCTCATCGCCGAGACCGCCGACATC
GTGATCGGCGCCGATGGCGTGCGCTCGCTGGTGCGCGAGCATCTGCAGGTGGGCGTGCGCCCGTCCTTTGCCCGGCGTGT
GGCCTATCGCGCCACCATTCCCGTGCGGGCCGACACGCCGCCGGATGTGCGCCTGTTCCTGGGCCCCGACGCCCACCTCG
TGACCTATCCCATCCGCGCCGGCGCGGCGGTGAATGTGGTCGCCATCGTGCGACAGGACCGGCCGGTCAACCGCTGGAGC
GAGCCGGGCGACGCCAGCACCGTGCATGAGGCCTTCTCGCAATGGGCGCCCGAAGTGCGCTCGCTGCTGCTCGATGCCTC
CTCTTTCCTGTGCTGGGGCCTCTATGACGTGGACCCGCTGCCGCGCTGGGGCGCCGGGCGCACGACGCTGCTGGGCGATG
CCGCCCACGCCATGCTGCCCTTCCTCGCGCAGGGCGCCGCGCAGGCCATCGAGGACGCCGCGACGCTCGGGTCCGTTCTG
GGGGCTGGCGGCCCGCTGGAGCCCGCGCTGCGCCGCTACGAGGCGCTGCGTCAGGCGCGCGCCGCCCGCGTTCAGCGCGG
GGCCCGCCGCAATGCGGTGATCTATCACCTGAAGGGCCCGGCCCGGTTCGCCCGCGATCTGGCGCTGCGCGCCACCGGCG
GCAGCCTCCTGTCGCGCTACGATTGGCTCTACGGGGGCTGA

Upstream 100 bases:

>100_bases
GCTCCTACTGCTCCACCCTCTATCGCTACAATCCGGCCCTGAAGGCCGGCACGGCGAAGCCTGAAGGCTGCGTCTGGGCA
GACAAGCCGGCGGCCTGACA

Downstream 100 bases:

>100_bases
TCGCTCAGCCCCACGCGGCCAGCAGCGCCCGGCCTGCCTCCCGCTCAAAGAGCGAGATCGACCCAGACCGCTGAATGGTC
GGATGCGGCATCCGCAGGCC

Product: salicylate hydroxylase

Products: NA

Alternate protein names: Constitutive 3-hydroxybenzoate 6-hydroxylase [H]

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MGQTSPASALIVGAGIGGLACGIALRRAGLAVRMVEQADELAEVGAGLQLTPNATRHLRDFGVLDALETVAVKPRALEVR
DGQTFGLLARCDYAPAVAKYGAPFLVLHRADLQKALADGAKAAGCDILLGARLQSLDTHGDNLRAVAEQEAGLIAETADI
VIGADGVRSLVREHLQVGVRPSFARRVAYRATIPVRADTPPDVRLFLGPDAHLVTYPIRAGAAVNVVAIVRQDRPVNRWS
EPGDASTVHEAFSQWAPEVRSLLLDASSFLCWGLYDVDPLPRWGAGRTTLLGDAAHAMLPFLAQGAAQAIEDAATLGSVL
GAGGPLEPALRRYEALRQARAARVQRGARRNAVIYHLKGPARFARDLALRATGGSLLSRYDWLYGG

Sequences:

>Translated_386_residues
MGQTSPASALIVGAGIGGLACGIALRRAGLAVRMVEQADELAEVGAGLQLTPNATRHLRDFGVLDALETVAVKPRALEVR
DGQTFGLLARCDYAPAVAKYGAPFLVLHRADLQKALADGAKAAGCDILLGARLQSLDTHGDNLRAVAEQEAGLIAETADI
VIGADGVRSLVREHLQVGVRPSFARRVAYRATIPVRADTPPDVRLFLGPDAHLVTYPIRAGAAVNVVAIVRQDRPVNRWS
EPGDASTVHEAFSQWAPEVRSLLLDASSFLCWGLYDVDPLPRWGAGRTTLLGDAAHAMLPFLAQGAAQAIEDAATLGSVL
GAGGPLEPALRRYEALRQARAARVQRGARRNAVIYHLKGPARFARDLALRATGGSLLSRYDWLYGG
>Mature_385_residues
GQTSPASALIVGAGIGGLACGIALRRAGLAVRMVEQADELAEVGAGLQLTPNATRHLRDFGVLDALETVAVKPRALEVRD
GQTFGLLARCDYAPAVAKYGAPFLVLHRADLQKALADGAKAAGCDILLGARLQSLDTHGDNLRAVAEQEAGLIAETADIV
IGADGVRSLVREHLQVGVRPSFARRVAYRATIPVRADTPPDVRLFLGPDAHLVTYPIRAGAAVNVVAIVRQDRPVNRWSE
PGDASTVHEAFSQWAPEVRSLLLDASSFLCWGLYDVDPLPRWGAGRTTLLGDAAHAMLPFLAQGAAQAIEDAATLGSVLG
AGGPLEPALRRYEALRQARAARVQRGARRNAVIYHLKGPARFARDLALRATGGSLLSRYDWLYGG

Specific function: Catalyzes the NAD- or NADP-dependent conversion of 3- hydroxybenzoate to gentisate. The affinity of the enzyme toward NAD is twice as high as for NADP. The enzyme shows higher specific activities against the intermediates in the degradation of 2,5- xyleno

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-hydroxybenzoate 6-hydroxylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.14.13.24 [H]

Molecular weight: Translated: 40926; Mature: 40795

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQTSPASALIVGAGIGGLACGIALRRAGLAVRMVEQADELAEVGAGLQLTPNATRHLRD
CCCCCCCCEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEECCCHHHHHHH
FGVLDALETVAVKPRALEVRDGQTFGLLARCDYAPAVAKYGAPFLVLHRADLQKALADGA
HHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCHHHHHCCCCEEEEEHHHHHHHHHCCC
KAAGCDILLGARLQSLDTHGDNLRAVAEQEAGLIAETADIVIGADGVRSLVREHLQVGVR
CCCCCCEEECCHHHHHCCCCCCHHHHHHHHCCCEEECCCEEEECHHHHHHHHHHHHCCCC
PSFARRVAYRATIPVRADTPPDVRLFLGPDAHLVTYPIRAGAAVNVVAIVRQDRPVNRWS
HHHHHHHHHEEEEEEECCCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCC
EPGDASTVHEAFSQWAPEVRSLLLDASSFLCWGLYDVDPLPRWGAGRTTLLGDAAHAMLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEECHHHHHHHH
FLAQGAAQAIEDAATLGSVLGAGGPLEPALRRYEALRQARAARVQRGARRNAVIYHLKGP
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCH
ARFARDLALRATGGSLLSRYDWLYGG
HHHHHHHHEECCCHHHHHHHHHHCCC
>Mature Secondary Structure 
GQTSPASALIVGAGIGGLACGIALRRAGLAVRMVEQADELAEVGAGLQLTPNATRHLRD
CCCCCCCEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEECCCHHHHHHH
FGVLDALETVAVKPRALEVRDGQTFGLLARCDYAPAVAKYGAPFLVLHRADLQKALADGA
HHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCHHHHHCCCCEEEEEHHHHHHHHHCCC
KAAGCDILLGARLQSLDTHGDNLRAVAEQEAGLIAETADIVIGADGVRSLVREHLQVGVR
CCCCCCEEECCHHHHHCCCCCCHHHHHHHHCCCEEECCCEEEECHHHHHHHHHHHHCCCC
PSFARRVAYRATIPVRADTPPDVRLFLGPDAHLVTYPIRAGAAVNVVAIVRQDRPVNRWS
HHHHHHHHHEEEEEEECCCCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCC
EPGDASTVHEAFSQWAPEVRSLLLDASSFLCWGLYDVDPLPRWGAGRTTLLGDAAHAMLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEECHHHHHHHH
FLAQGAAQAIEDAATLGSVLGAGGPLEPALRRYEALRQARAARVQRGARRNAVIYHLKGP
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCH
ARFARDLALRATGGSLLSRYDWLYGG
HHHHHHHHEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12909360 [H]