Click here to switch to the map view.

The map label for this gene is fabG [H]

Identifier: 158425158

GI number: 158425158

Start: 4057948

End: 4058670

Strand: Reverse

Name: fabG [H]

Synonym: AZC_3534

Alternate gene names: 158425158

Gene position: 4058670-4057948 (Counterclockwise)

Preceding gene: 158425159

Following gene: 158425154

Centisome position: 75.58

GC content: 71.92

Gene sequence:

>723_bases
ATGGCACGGACGGCAATCCTCATCGGCGGTGCGGGCGGCATCGGGCGCCCACTCGCCCTGCGACTGGCGGCACAGGGCTG
GCGGCTGCATCTCATCGGCCGGACGGCCGCCAAGCTCGAAGCGCTCGCAGCCGAGACGGGCGGGACCTGGGCTCAGGCGG
ATGTGCGGGACACGTCCGCGCTTGCCGCTGCCGTCGCTGCCGCGCCCGGACCGGTCTGGGCGCTCGCCTATGCGGCCGGA
ACCATCACCCTGAAGCCGCTCGCCCGGATCACGCCTGACGATGCGCGGGCCGATTTCGAGGTGAATGCGCTGGGCGCCAT
GGCGGCGGTCCAGGCCGCGTTGCCCGCGCTGAAGGCCGAGGGCGGCAGCGTAGTCCTGTTCTCGAGCGTGGCGGTGGGGC
AGGGCTTTGCCAATCACGCGTCCATCGCCATGGCCAAGGGGGCGGTGGAGGGGCTCACTCGGGCGCTGGCTGCGGAGCTT
GCGCCGAAGATCCGGGTGAACTGCATCGCCCCCTCGCTGACGGAGACCCCGCTCGCGGCTGTCCTCACGGCCAATCCGCA
GATGGCGAGTGCCATCGCCGGGCTCCACCCTCTCCAGCGTCTCGGCGCGCCGGACGATATCGCCGCAGCGGCCGCCTTCC
TCCTGTCGGATGAGGCGGGCTGGATCTCCGGCCAGATCCTGGGCGTCGATGGGGGACGGTCCAGTCTGCGGACCAAGGGC
TGA

Upstream 100 bases:

>100_bases
CCCTTTGCGTCCTTTCAAGGGCGAGGGCGAAATTTTCCGCTGCCCCCGGCCATCCCGTGGCGCTTTGCGTCCGTATCCTC
CGGCAGAGCAGGGAGGCGAC

Downstream 100 bases:

>100_bases
CGGCCCGTCTTACACGCGCTTCCACATGAAGGTGGTGGGGCAGGGGCGCCCGTCCGGCCACAGGGCGTATTCCGGCACCG
TGCCCGCCACCTCCCAGCCG

Product: short-chain dehydrogenase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MARTAILIGGAGGIGRPLALRLAAQGWRLHLIGRTAAKLEALAAETGGTWAQADVRDTSALAAAVAAAPGPVWALAYAAG
TITLKPLARITPDDARADFEVNALGAMAAVQAALPALKAEGGSVVLFSSVAVGQGFANHASIAMAKGAVEGLTRALAAEL
APKIRVNCIAPSLTETPLAAVLTANPQMASAIAGLHPLQRLGAPDDIAAAAAFLLSDEAGWISGQILGVDGGRSSLRTKG

Sequences:

>Translated_240_residues
MARTAILIGGAGGIGRPLALRLAAQGWRLHLIGRTAAKLEALAAETGGTWAQADVRDTSALAAAVAAAPGPVWALAYAAG
TITLKPLARITPDDARADFEVNALGAMAAVQAALPALKAEGGSVVLFSSVAVGQGFANHASIAMAKGAVEGLTRALAAEL
APKIRVNCIAPSLTETPLAAVLTANPQMASAIAGLHPLQRLGAPDDIAAAAAFLLSDEAGWISGQILGVDGGRSSLRTKG
>Mature_239_residues
ARTAILIGGAGGIGRPLALRLAAQGWRLHLIGRTAAKLEALAAETGGTWAQADVRDTSALAAAVAAAPGPVWALAYAAGT
ITLKPLARITPDDARADFEVNALGAMAAVQAALPALKAEGGSVVLFSSVAVGQGFANHASIAMAKGAVEGLTRALAAELA
PKIRVNCIAPSLTETPLAAVLTANPQMASAIAGLHPLQRLGAPDDIAAAAAFLLSDEAGWISGQILGVDGGRSSLRTKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=32.2314049586777, Blast_Score=101, Evalue=5e-22,
Organism=Homo sapiens, GI7705925, Length=232, Percent_Identity=33.1896551724138, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI5031737, Length=247, Percent_Identity=29.9595141700405, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI32483357, Length=244, Percent_Identity=28.2786885245902, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI126723750, Length=144, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=5e-15,
Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=28.8, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=30.4347826086957, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI59889578, Length=143, Percent_Identity=39.1608391608392, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI4758504, Length=249, Percent_Identity=29.3172690763052, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI4503301, Length=210, Percent_Identity=29.5238095238095, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=33.8582677165354, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1787905, Length=241, Percent_Identity=34.0248962655602, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI2367175, Length=249, Percent_Identity=30.9236947791165, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787335, Length=237, Percent_Identity=30.8016877637131, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=30.8943089430894, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1787526, Length=245, Percent_Identity=30.2040816326531, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1790717, Length=240, Percent_Identity=27.5, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI2367365, Length=237, Percent_Identity=28.6919831223629, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87082160, Length=245, Percent_Identity=27.7551020408163, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1789378, Length=243, Percent_Identity=26.3374485596708, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=31.1740890688259, Blast_Score=94, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI115534694, Length=239, Percent_Identity=29.7071129707113, Blast_Score=87, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17560676, Length=243, Percent_Identity=30.0411522633745, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=29.718875502008, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17562910, Length=257, Percent_Identity=27.2373540856031, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17555706, Length=240, Percent_Identity=28.75, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17538182, Length=245, Percent_Identity=28.1632653061224, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17561402, Length=139, Percent_Identity=33.8129496402878, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI25147288, Length=243, Percent_Identity=28.3950617283951, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=261, Percent_Identity=27.9693486590038, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=251, Percent_Identity=29.4820717131474, Blast_Score=89, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24643142, Length=238, Percent_Identity=31.0924369747899, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI23397609, Length=244, Percent_Identity=31.9672131147541, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI21355319, Length=136, Percent_Identity=35.2941176470588, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24644339, Length=256, Percent_Identity=30.078125, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=30.241935483871, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24639444, Length=241, Percent_Identity=27.3858921161826, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571526, Length=256, Percent_Identity=28.90625, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24644337, Length=120, Percent_Identity=35.8333333333333, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 23932; Mature: 23801

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTAILIGGAGGIGRPLALRLAAQGWRLHLIGRTAAKLEALAAETGGTWAQADVRDTSA
CCCEEEEEECCCCCCCHHEEEEECCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCHHHH
LAAAVAAAPGPVWALAYAAGTITLKPLARITPDDARADFEVNALGAMAAVQAALPALKAE
HHHHHHCCCCCCEEEEHHCCEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCC
GGSVVLFSSVAVGQGFANHASIAMAKGAVEGLTRALAAELAPKIRVNCIAPSLTETPLAA
CCCEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEE
VLTANPQMASAIAGLHPLQRLGAPDDIAAAAAFLLSDEAGWISGQILGVDGGRSSLRTKG
EEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
ARTAILIGGAGGIGRPLALRLAAQGWRLHLIGRTAAKLEALAAETGGTWAQADVRDTSA
CCEEEEEECCCCCCCHHEEEEECCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCHHHH
LAAAVAAAPGPVWALAYAAGTITLKPLARITPDDARADFEVNALGAMAAVQAALPALKAE
HHHHHHCCCCCCEEEEHHCCEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCC
GGSVVLFSSVAVGQGFANHASIAMAKGAVEGLTRALAAELAPKIRVNCIAPSLTETPLAA
CCCEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEE
VLTANPQMASAIAGLHPLQRLGAPDDIAAAAAFLLSDEAGWISGQILGVDGGRSSLRTKG
EEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9784136 [H]