Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is 158425139

Identifier: 158425139

GI number: 158425139

Start: 4034408

End: 4035502

Strand: Reverse

Name: 158425139

Synonym: AZC_3515

Alternate gene names: NA

Gene position: 4035502-4034408 (Counterclockwise)

Preceding gene: 158425140

Following gene: 158425138

Centisome position: 75.15

GC content: 69.04

Gene sequence:

>1095_bases
TTGCCGTCCTCTTGCAGTGGGGGAGAGCGCCGGGGCGCCGTTCCGGCTGATTGCTTGCTGATCAGGAGTTCTTTGATGAC
CTTGTCGATCCTCCGCGCGGCGGGTCTTGCCTTTCTTGTAGCCGGCGGGTTGAACGCCGCTGCCTTTGCCCAGTCCGCTC
CGCCGGCCAAGTCCGAGCCGGTCGTGTGGGAGCTGATTGACGAATATCCCGCCTCTGCCATTCCGGGGCAGGCGGACGCC
ACCTTTGCGGCGGCGGTCGAGAAGGCGACGGGCGGCAAGCTGGTGATCCAGCCCATCCCCGATGCCAAGTCCGGCCTGCG
CTCACGCGAGCAGCTGAAGGCGGTGAGCGAGGGACGCTTCGCCATGGCCGACAGCTTCGGCGGGGCGCTGGCCGAGGACA
GCCCGCTGTTCCTCCTGTCCTCGCTGCCCTTCCTCACCGCCTCCGCCGACGAGGCGCGCCAGCTCTATGTGGCCGCCCGC
CCGCTCTATGAGGCGGAATTCGCCCGGCGCGGGCAGAAACTGCTGTTCGTGACACCCTGGCCGCCTTCGGGCATCTGGTC
GGCCGAGGCGGTCTCCAGCCCGGCGGCGCTCAAGGCGCTCAAGATCCGCACGTATGACCAGACCGGCGCGGAGCTTTTTG
CCGCCACCTCCACCCGCGCGGCGGTGGTCTCCTTTTCCGACCTGATGCCCAAGCTCAAGACCGGCGAGTTCAATGCCGTG
CTCTCCTCGGGCGACGGCGGCGCGGGGCGTGAGCTCTGGGTGCATGTGCGCCACTTCTCCCAGATCACCTATGCGGTGCC
GCTGAGCTTCGGCACCGTCTCGCTCACCGCCTGGAACGCGCTTGATCCGCAGACGCAGGCGGCGGTGCTGCGCGCCGGCG
AGGAGACGACGCAGGCGCAGTGGAAGGCCATGGAAGGGCGGGTCGCCGCCAACTACCAGCGCATGCGGGAAAATGGCGTC
GTCATCGACGAAGCCCCGCCCGCGGCGGTCATGGACCTGCTGCGCACGGCGGCGTCCAAATCCATCGTGCGCTGGCGCAC
GACCGTGACGCCGGAAGCGGCGGCGGTGCTGGACACCTTCGCGGCGACCCGCTGA

Upstream 100 bases:

>100_bases
AATCACAGATGTTGGCGTTTTTCGTCTTCCCTCATCGGTTGTCGAAAAATGCATGAGCCGGCGCCGCAGATGCATCTCGT
GAGTTGATCCGCCGCACCAT

Downstream 100 bases:

>100_bases
CCGGCGGGCGCCGCGCGCAACCACACGTGACAAGGGGCCGCTTCCTCCTCTAAAGAGCGCGGAGGCGGAAAGCGGCGCCT
TGCGGGGACGGCTCCGGAGA

Product: TRAP dicarboxylate transporter-DctP subunit precursor

Products: NA

Alternate protein names: TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; TRAP Dicarboxylate Transporter-DctP Subunit; Signal Peptide Protein; Exported Protein; Twin-Arginine Translocation Pathway Signal; Trap Dicarboxylate Transporter Dctp Subunit; TRAP Dicarboxylate Transporter; Trap Dicarboxylate Transporter-Dctp Subunit; TRAP-Type C4-Dicarboxylate Transporter Periplasmic Protein; Secreted Protein

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MPSSCSGGERRGAVPADCLLIRSSLMTLSILRAAGLAFLVAGGLNAAAFAQSAPPAKSEPVVWELIDEYPASAIPGQADA
TFAAAVEKATGGKLVIQPIPDAKSGLRSREQLKAVSEGRFAMADSFGGALAEDSPLFLLSSLPFLTASADEARQLYVAAR
PLYEAEFARRGQKLLFVTPWPPSGIWSAEAVSSPAALKALKIRTYDQTGAELFAATSTRAAVVSFSDLMPKLKTGEFNAV
LSSGDGGAGRELWVHVRHFSQITYAVPLSFGTVSLTAWNALDPQTQAAVLRAGEETTQAQWKAMEGRVAANYQRMRENGV
VIDEAPPAAVMDLLRTAASKSIVRWRTTVTPEAAAVLDTFAATR

Sequences:

>Translated_364_residues
MPSSCSGGERRGAVPADCLLIRSSLMTLSILRAAGLAFLVAGGLNAAAFAQSAPPAKSEPVVWELIDEYPASAIPGQADA
TFAAAVEKATGGKLVIQPIPDAKSGLRSREQLKAVSEGRFAMADSFGGALAEDSPLFLLSSLPFLTASADEARQLYVAAR
PLYEAEFARRGQKLLFVTPWPPSGIWSAEAVSSPAALKALKIRTYDQTGAELFAATSTRAAVVSFSDLMPKLKTGEFNAV
LSSGDGGAGRELWVHVRHFSQITYAVPLSFGTVSLTAWNALDPQTQAAVLRAGEETTQAQWKAMEGRVAANYQRMRENGV
VIDEAPPAAVMDLLRTAASKSIVRWRTTVTPEAAAVLDTFAATR
>Mature_363_residues
PSSCSGGERRGAVPADCLLIRSSLMTLSILRAAGLAFLVAGGLNAAAFAQSAPPAKSEPVVWELIDEYPASAIPGQADAT
FAAAVEKATGGKLVIQPIPDAKSGLRSREQLKAVSEGRFAMADSFGGALAEDSPLFLLSSLPFLTASADEARQLYVAARP
LYEAEFARRGQKLLFVTPWPPSGIWSAEAVSSPAALKALKIRTYDQTGAELFAATSTRAAVVSFSDLMPKLKTGEFNAVL
SSGDGGAGRELWVHVRHFSQITYAVPLSFGTVSLTAWNALDPQTQAAVLRAGEETTQAQWKAMEGRVAANYQRMRENGVV
IDEAPPAAVMDLLRTAASKSIVRWRTTVTPEAAAVLDTFAATR

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38500; Mature: 38369

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSCSGGERRGAVPADCLLIRSSLMTLSILRAAGLAFLVAGGLNAAAFAQSAPPAKSEP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCC
VVWELIDEYPASAIPGQADATFAAAVEKATGGKLVIQPIPDAKSGLRSREQLKAVSEGRF
HHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCE
AMADSFGGALAEDSPLFLLSSLPFLTASADEARQLYVAARPLYEAEFARRGQKLLFVTPW
EEHHCCCCCCCCCCCEEEECCCCCEECCCHHHHEEEHHHCCHHHHHHHHCCCEEEEEECC
PPSGIWSAEAVSSPAALKALKIRTYDQTGAELFAATSTRAAVVSFSDLMPKLKTGEFNAV
CCCCCCCHHHHCCCHHHEEEEEEECCCCCCCEEEECCCCHHEEEHHHHCCCCCCCCEEEE
LSSGDGGAGRELWVHVRHFSQITYAVPLSFGTVSLTAWNALDPQTQAAVLRAGEETTQAQ
EECCCCCCCHHHEEEEEHHCCEEEEEEEECCEEEEEEECCCCCHHHHHHHHCCCHHHHHH
WKAMEGRVAANYQRMRENGVVIDEAPPAAVMDLLRTAASKSIVRWRTTVTPEAAAVLDTF
HHHHCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHH
AATR
HCCC
>Mature Secondary Structure 
PSSCSGGERRGAVPADCLLIRSSLMTLSILRAAGLAFLVAGGLNAAAFAQSAPPAKSEP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCC
VVWELIDEYPASAIPGQADATFAAAVEKATGGKLVIQPIPDAKSGLRSREQLKAVSEGRF
HHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCE
AMADSFGGALAEDSPLFLLSSLPFLTASADEARQLYVAARPLYEAEFARRGQKLLFVTPW
EEHHCCCCCCCCCCCEEEECCCCCEECCCHHHHEEEHHHCCHHHHHHHHCCCEEEEEECC
PPSGIWSAEAVSSPAALKALKIRTYDQTGAELFAATSTRAAVVSFSDLMPKLKTGEFNAV
CCCCCCCHHHHCCCHHHEEEEEEECCCCCCCEEEECCCCHHEEEHHHHCCCCCCCCEEEE
LSSGDGGAGRELWVHVRHFSQITYAVPLSFGTVSLTAWNALDPQTQAAVLRAGEETTQAQ
EECCCCCCCHHHEEEEEHHCCEEEEEEEECCEEEEEEECCCCCHHHHHHHHCCCHHHHHH
WKAMEGRVAANYQRMRENGVVIDEAPPAAVMDLLRTAASKSIVRWRTTVTPEAAAVLDTF
HHHHCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHH
AATR
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA