| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424880
Identifier: 158424880
GI number: 158424880
Start: 3756162
End: 3757799
Strand: Reverse
Name: 158424880
Synonym: AZC_3256
Alternate gene names: NA
Gene position: 3757799-3756162 (Counterclockwise)
Preceding gene: 158424886
Following gene: 158424879
Centisome position: 69.98
GC content: 58.73
Gene sequence:
>1638_bases GTGACATGCCCTATGGCCAGCGTTGCGCAGTACCTTTCCGAGCATGGTCCCTCACGTTCCTCACGGATCGTTGAGGCATT TGTCGCATCTGGTTTATCCGCAGAGGCAGCGCGTCAACGCGTATCGCGAGCCAAGCCGCCGGTCCGCAGCTTTCCCGTTC CGCTCCTGCCTAAACGCGAGGCGTTCCTCTATCTGGAGAAGGACCGCAACGGCGAACGGTTCTGGCAAAATTTCCTGCGC GATCTCCGCGAAACCAATTCGATTACGGCGGCGGCTATCGACGGCGTGATCGCTCGAGGCGGCATAATTCCTGTCGAGCA ATTCGCGGTTGTAAGCGGTGCGACGGTCAGGCCTAAGACCGGGCAAGTCCCGGCTGATACGGTCGCCAGGCGTCTCATAA AGTCCGACTTCCTCAAGGAATTCCACGACCCGGAATATGGCCGCTGTTTCCACACGGCTCCGAGCTTGGCCATGGGCACA CCCGCTGCCATGCGGGCGCGGGACATTACGGAACGTGTCTTGCTGGATGGCCTGCGCGAATGGTGCCGAAAAATTGGCCT CGCGAGCTACAACGCCATCCGCATCCGGGGCGACGAAGACTTGAAGCCGATCGGGCCTTTCGCATTCGATCTTGCCGGGC CGAGCTATCTCCTACCGTTGCAGGGATCGGCAAGCAAACCGGGTTTCGTTGTGGCGGACGTTTTCGCCGAAGGCATTTTG ACCGTCCATGAGATTCAGTTCTTCATCCGCAAAGCTCGCGTTCTCAAAGCCAGCTTCAAGGATATCGGCATTCTGTCGAT CATCGTCGCGGAAGGCTTCACGGGCGAAGCAATGACCGCAGGACATGCGGCGGGCGTTATGCTGGCAACCCCCAAAGACC TGTTCGGGAGGCGTGTCGGGGAGGCAATCGCCTCGCTCTGCGAAGTGCTCAAGAATGCCGCGAAATATGCGTCATCGAGC CCCGAACGCCTCACCATGCTGTTGAACAACCTGTTTGATATCGAAGGACGCAACAAGAACCTTCGGGGCATCCTGTTTGA GATGGTGGCGGGCTATCTTGCAAGGCGCACAGCCATGACGATGGATATGGGCGTCACCGCCAAAGACCCGAGCACCGGGA AGACAGCGGATATCGACGTTCAGACGATCACCAACCAGAACGCAATCGTCACGGCCATTGAATGCAAAGGTAAGGAGCCG GGCGGTGCGTTGAGTCTGGCAGAGGTGGAGGAATGGCTCGCGAAGATTCCCACATTCCGCGCTCATTACGCTCAGCACGG GTATTTACGCGAGGCAGAGCAGCGCTTCGAAATCTGGACGAGTGGCAGCATCGCACCTGATGCGCTGGCGAAACTGAAAG AGGAACAGGTCCGCCGCGTAAAGGCGAAGATCGACTGGAAGGACGGCGATGCGGTTCTGGCGCTGGCGAGGGCGGGCAAA GAGAAGGCCCTTGCCGACGCTCTCAACCAGCATTTCTTCCGTCACCCTCTTGCCGAAGTCGCCAAGCAATTCGAAGCCGA CGAGGCCGCAGGAAAAGTGCAGTCATGGATGGCTCCTACGAAATCTAAACCGCCTGAGTTCAAAGGTCCGGCGATTGAAG TCGTCTCGTTGGATGACGAGTTGGACGCCGCCGAGTGA
Upstream 100 bases:
>100_bases GACCCAGAAACAGCCATCTAAGCCATTGATTTAAAACAATTCTGAACACATCGTCGAAAAACGAGGCCGTGAAGGTACTT GAATTAATAAATTAAGTAGT
Downstream 100 bases:
>100_bases CCTAGGCTCAGGACCCATTAAACGGCTTGCGTGATGTGTTGCGGGTTGATTCATTGGCGGCGGAGGAGCCGCCGATGAGT GACCTGTTCTGGCTGACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MTCPMASVAQYLSEHGPSRSSRIVEAFVASGLSAEAARQRVSRAKPPVRSFPVPLLPKREAFLYLEKDRNGERFWQNFLR DLRETNSITAAAIDGVIARGGIIPVEQFAVVSGATVRPKTGQVPADTVARRLIKSDFLKEFHDPEYGRCFHTAPSLAMGT PAAMRARDITERVLLDGLREWCRKIGLASYNAIRIRGDEDLKPIGPFAFDLAGPSYLLPLQGSASKPGFVVADVFAEGIL TVHEIQFFIRKARVLKASFKDIGILSIIVAEGFTGEAMTAGHAAGVMLATPKDLFGRRVGEAIASLCEVLKNAAKYASSS PERLTMLLNNLFDIEGRNKNLRGILFEMVAGYLARRTAMTMDMGVTAKDPSTGKTADIDVQTITNQNAIVTAIECKGKEP GGALSLAEVEEWLAKIPTFRAHYAQHGYLREAEQRFEIWTSGSIAPDALAKLKEEQVRRVKAKIDWKDGDAVLALARAGK EKALADALNQHFFRHPLAEVAKQFEADEAAGKVQSWMAPTKSKPPEFKGPAIEVVSLDDELDAAE
Sequences:
>Translated_545_residues MTCPMASVAQYLSEHGPSRSSRIVEAFVASGLSAEAARQRVSRAKPPVRSFPVPLLPKREAFLYLEKDRNGERFWQNFLR DLRETNSITAAAIDGVIARGGIIPVEQFAVVSGATVRPKTGQVPADTVARRLIKSDFLKEFHDPEYGRCFHTAPSLAMGT PAAMRARDITERVLLDGLREWCRKIGLASYNAIRIRGDEDLKPIGPFAFDLAGPSYLLPLQGSASKPGFVVADVFAEGIL TVHEIQFFIRKARVLKASFKDIGILSIIVAEGFTGEAMTAGHAAGVMLATPKDLFGRRVGEAIASLCEVLKNAAKYASSS PERLTMLLNNLFDIEGRNKNLRGILFEMVAGYLARRTAMTMDMGVTAKDPSTGKTADIDVQTITNQNAIVTAIECKGKEP GGALSLAEVEEWLAKIPTFRAHYAQHGYLREAEQRFEIWTSGSIAPDALAKLKEEQVRRVKAKIDWKDGDAVLALARAGK EKALADALNQHFFRHPLAEVAKQFEADEAAGKVQSWMAPTKSKPPEFKGPAIEVVSLDDELDAAE >Mature_544_residues TCPMASVAQYLSEHGPSRSSRIVEAFVASGLSAEAARQRVSRAKPPVRSFPVPLLPKREAFLYLEKDRNGERFWQNFLRD LRETNSITAAAIDGVIARGGIIPVEQFAVVSGATVRPKTGQVPADTVARRLIKSDFLKEFHDPEYGRCFHTAPSLAMGTP AAMRARDITERVLLDGLREWCRKIGLASYNAIRIRGDEDLKPIGPFAFDLAGPSYLLPLQGSASKPGFVVADVFAEGILT VHEIQFFIRKARVLKASFKDIGILSIIVAEGFTGEAMTAGHAAGVMLATPKDLFGRRVGEAIASLCEVLKNAAKYASSSP ERLTMLLNNLFDIEGRNKNLRGILFEMVAGYLARRTAMTMDMGVTAKDPSTGKTADIDVQTITNQNAIVTAIECKGKEPG GALSLAEVEEWLAKIPTFRAHYAQHGYLREAEQRFEIWTSGSIAPDALAKLKEEQVRRVKAKIDWKDGDAVLALARAGKE KALADALNQHFFRHPLAEVAKQFEADEAAGKVQSWMAPTKSKPPEFKGPAIEVVSLDDELDAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59563; Mature: 59432
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCPMASVAQYLSEHGPSRSSRIVEAFVASGLSAEAARQRVSRAKPPVRSFPVPLLPKRE CCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCC AFLYLEKDRNGERFWQNFLRDLRETNSITAAAIDGVIARGGIIPVEQFAVVSGATVRPKT EEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCC GQVPADTVARRLIKSDFLKEFHDPEYGRCFHTAPSLAMGTPAAMRARDITERVLLDGLRE CCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHH WCRKIGLASYNAIRIRGDEDLKPIGPFAFDLAGPSYLLPLQGSASKPGFVVADVFAEGIL HHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCCCEEEECCCCCCCCCEEEHHHHHHHHH TVHEIQFFIRKARVLKASFKDIGILSIIVAEGFTGEAMTAGHAAGVMLATPKDLFGRRVG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHH EAIASLCEVLKNAAKYASSSPERLTMLLNNLFDIEGRNKNLRGILFEMVAGYLARRTAMT HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH MDMGVTAKDPSTGKTADIDVQTITNQNAIVTAIECKGKEPGGALSLAEVEEWLAKIPTFR HCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHCCCHH AHYAQHGYLREAEQRFEIWTSGSIAPDALAKLKEEQVRRVKAKIDWKDGDAVLALARAGK HHHHHCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCH EKALADALNQHFFRHPLAEVAKQFEADEAAGKVQSWMAPTKSKPPEFKGPAIEVVSLDDE HHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCC LDAAE CCCCC >Mature Secondary Structure TCPMASVAQYLSEHGPSRSSRIVEAFVASGLSAEAARQRVSRAKPPVRSFPVPLLPKRE CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCC AFLYLEKDRNGERFWQNFLRDLRETNSITAAAIDGVIARGGIIPVEQFAVVSGATVRPKT EEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCC GQVPADTVARRLIKSDFLKEFHDPEYGRCFHTAPSLAMGTPAAMRARDITERVLLDGLRE CCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHCCCCHHHHHHHHHHHHHHHHHHH WCRKIGLASYNAIRIRGDEDLKPIGPFAFDLAGPSYLLPLQGSASKPGFVVADVFAEGIL HHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCCCEEEECCCCCCCCCEEEHHHHHHHHH TVHEIQFFIRKARVLKASFKDIGILSIIVAEGFTGEAMTAGHAAGVMLATPKDLFGRRVG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHH EAIASLCEVLKNAAKYASSSPERLTMLLNNLFDIEGRNKNLRGILFEMVAGYLARRTAMT HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH MDMGVTAKDPSTGKTADIDVQTITNQNAIVTAIECKGKEPGGALSLAEVEEWLAKIPTFR HCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHCCCHH AHYAQHGYLREAEQRFEIWTSGSIAPDALAKLKEEQVRRVKAKIDWKDGDAVLALARAGK HHHHHCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCH EKALADALNQHFFRHPLAEVAKQFEADEAAGKVQSWMAPTKSKPPEFKGPAIEVVSLDDE HHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCC LDAAE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA