| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424879
Identifier: 158424879
GI number: 158424879
Start: 3755719
End: 3756087
Strand: Reverse
Name: 158424879
Synonym: AZC_3255
Alternate gene names: NA
Gene position: 3756087-3755719 (Counterclockwise)
Preceding gene: 158424880
Following gene: 158424878
Centisome position: 69.95
GC content: 61.25
Gene sequence:
>369_bases ATGAGTGACCTGTTCTGGCTGACGGATGAGCAGATGCAGCGGATCGAGCCGTACTTTCCGTTGTCGCATGGTGTGCCGCG CGTGGATGATCGGCGGATCGTGAGCGGCATCATTTTCGTGATCCGCAACGGCCTGCGTTGGCGGGATGCGCCAGCGGCAT ACGGTCCGCCCAAAACGATCTACAATCGGTTCATCCGCTGGAGCCGGATGGGGGTGTTCAACCGCATCTTTGCGGGGCTG GTAGCCGAGGGCGGGCTGCCAGATCAGTTGATGATCGACGCCACGCATCTGAAAGCGCACCGGACGGCAGCCAGCCTGCT CAAAAAGGGGCTTTTCCCCGATGTATCGGGCGCACCAAAGGAGGGCTGA
Upstream 100 bases:
>100_bases ATGACGAGTTGGACGCCGCCGAGTGACCTAGGCTCAGGACCCATTAAACGGCTTGCGTGATGTGTTGCGGGTTGATTCAT TGGCGGCGGAGGAGCCGCCG
Downstream 100 bases:
>100_bases ACTCCAAGCTGCACGCCGTCTGCGATGATCGTGGTCGTCCCCGCGTCATGTTGCTCACCGAAGGGCAGATGAGCGACTAC AAGGGAGCGGCCCTCATGTT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSDLFWLTDEQMQRIEPYFPLSHGVPRVDDRRIVSGIIFVIRNGLRWRDAPAAYGPPKTIYNRFIRWSRMGVFNRIFAGL VAEGGLPDQLMIDATHLKAHRTAASLLKKGLFPDVSGAPKEG
Sequences:
>Translated_122_residues MSDLFWLTDEQMQRIEPYFPLSHGVPRVDDRRIVSGIIFVIRNGLRWRDAPAAYGPPKTIYNRFIRWSRMGVFNRIFAGL VAEGGLPDQLMIDATHLKAHRTAASLLKKGLFPDVSGAPKEG >Mature_121_residues SDLFWLTDEQMQRIEPYFPLSHGVPRVDDRRIVSGIIFVIRNGLRWRDAPAAYGPPKTIYNRFIRWSRMGVFNRIFAGLV AEGGLPDQLMIDATHLKAHRTAASLLKKGLFPDVSGAPKEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To transposase of insertion sequence IS6501 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13808; Mature: 13677
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLFWLTDEQMQRIEPYFPLSHGVPRVDDRRIVSGIIFVIRNGLRWRDAPAAYGPPKTI CCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH YNRFIRWSRMGVFNRIFAGLVAEGGLPDQLMIDATHLKAHRTAASLLKKGLFPDVSGAPK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCC EG CC >Mature Secondary Structure SDLFWLTDEQMQRIEPYFPLSHGVPRVDDRRIVSGIIFVIRNGLRWRDAPAAYGPPKTI CCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH YNRFIRWSRMGVFNRIFAGLVAEGGLPDQLMIDATHLKAHRTAASLLKKGLFPDVSGAPK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCC EG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424; 8190622 [H]