| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is wecB [H]
Identifier: 158424839
GI number: 158424839
Start: 3680330
End: 3681496
Strand: Direct
Name: wecB [H]
Synonym: AZC_3215
Alternate gene names: 158424839
Gene position: 3680330-3681496 (Clockwise)
Preceding gene: 158424837
Following gene: 158424840
Centisome position: 68.54
GC content: 65.9
Gene sequence:
>1167_bases ATGAAGGTGATGAGCATATTCGGGACGCGGCCTGAAGCCATCAAGATGGCGCCGCTCGTCCGAGCCATCGAGGCGTCTGC GGATCTGTCGGGACTGGTGTGCGTGACGGGACAGCATCGCGCGATGCTGGATCAGGTGCTGTCTTTTTTCGGCATCGTGC CGGACATCGATCTCGACGTGATGGTCCCCAACCAGACACTCAATGGGCTCATGTCCCGTGTGCTGGCACGCCTTGACGAG GCCCTGGCCACCCACCGCCCCGATTATGTGCTGGTTCATGGCGATACCACGACCGCGCTCGCGGCCACGCTTGCTGCCTT TCATCGGGGCATTCCCGTGGGCCATGTGGAAGCCGGCCTGCGCACCTACGACCTCACCCAGCCCTGGCCGGAGGAAATGA ACCGTCAGGTGGTGGACCGCATGGCCCGCGACCTCTTCAGCCCCACCGAGCAGTCCGCCGCGCATCTGCGCGACGAACGG GCACCAGGGCGGATTTTCGTTACCGGCAATACGGTCATCGACGCGCTGCTGATGACGCTCGGCCGCATCGATGCGGATGC GGAACTGAAAGCCACCCTCGACCGGCAGTTCTCCTTCCTGGACCCCGGTCGACGCCTCGTGCTGGTGACGGGACACCGGC GGGAGAATTTCGGCGAAGGTTTTGCCCAGATCTGCGAAGCGCTGGCCGCGCTCGCGCAGAGGCAGGACATCGAGATCGTC TACCCTGTCCACCTCAATCCGAATGTCCGCGGGCCGGTGCACGAACGCCTTTCAGGAAAGCCGAACCTGCACCTCATCGC GCCGCTCGACTACGTCCCGTTCGTTGCCCTGATGCGTCGGGCGAACGTCATCCTCACCGATTCCGGCGGCGTGCAGGAGG AGGCCCCGTCCCTCGGCAAGCCGGTCCTCGTGATGCGGGACGTGACCGAGCGCCCCGAGGCCGTCGCGGCGGGCACGGTG GAACTTGTGGGGACCGACGCCGCCCGCATCGTCGCGCATGTCACCCGCATTCTCGATCGTGCCGACAGTCCGTCGGCTTC GGCTGCGCGCATCAACCCCTATGGCGACGGCGGCGCCAGCCGTCGCATCGTGGACGTGTTGTGCGGACGCATTCCGCTCC CTTTCCATGACCGTGCGGCGCAGCGGCCCGCACGCATGCGGAGGTAA
Upstream 100 bases:
>100_bases CAGTCATTCATATATCGTCGTTCCATGCTAGGCCATCGCCTGCAGGGAGCGCGTCAGGTCTCGCAACAGGGGCCGATCAA CAGGTGATAACCGGTACCTC
Downstream 100 bases:
>100_bases TTTAATAAATGATCGGTCATAGAGCTCTTCAGGCCTCGAAAGGCCGGTCCGTCACGCGTTCGAGGGTCGTAATGTCTGTC CACTACAACCGTTTCAAGAG
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKVMSIFGTRPEAIKMAPLVRAIEASADLSGLVCVTGQHRAMLDQVLSFFGIVPDIDLDVMVPNQTLNGLMSRVLARLDE ALATHRPDYVLVHGDTTTALAATLAAFHRGIPVGHVEAGLRTYDLTQPWPEEMNRQVVDRMARDLFSPTEQSAAHLRDER APGRIFVTGNTVIDALLMTLGRIDADAELKATLDRQFSFLDPGRRLVLVTGHRRENFGEGFAQICEALAALAQRQDIEIV YPVHLNPNVRGPVHERLSGKPNLHLIAPLDYVPFVALMRRANVILTDSGGVQEEAPSLGKPVLVMRDVTERPEAVAAGTV ELVGTDAARIVAHVTRILDRADSPSASAARINPYGDGGASRRIVDVLCGRIPLPFHDRAAQRPARMRR
Sequences:
>Translated_388_residues MKVMSIFGTRPEAIKMAPLVRAIEASADLSGLVCVTGQHRAMLDQVLSFFGIVPDIDLDVMVPNQTLNGLMSRVLARLDE ALATHRPDYVLVHGDTTTALAATLAAFHRGIPVGHVEAGLRTYDLTQPWPEEMNRQVVDRMARDLFSPTEQSAAHLRDER APGRIFVTGNTVIDALLMTLGRIDADAELKATLDRQFSFLDPGRRLVLVTGHRRENFGEGFAQICEALAALAQRQDIEIV YPVHLNPNVRGPVHERLSGKPNLHLIAPLDYVPFVALMRRANVILTDSGGVQEEAPSLGKPVLVMRDVTERPEAVAAGTV ELVGTDAARIVAHVTRILDRADSPSASAARINPYGDGGASRRIVDVLCGRIPLPFHDRAAQRPARMRR >Mature_388_residues MKVMSIFGTRPEAIKMAPLVRAIEASADLSGLVCVTGQHRAMLDQVLSFFGIVPDIDLDVMVPNQTLNGLMSRVLARLDE ALATHRPDYVLVHGDTTTALAATLAAFHRGIPVGHVEAGLRTYDLTQPWPEEMNRQVVDRMARDLFSPTEQSAAHLRDER APGRIFVTGNTVIDALLMTLGRIDADAELKATLDRQFSFLDPGRRLVLVTGHRRENFGEGFAQICEALAALAQRQDIEIV YPVHLNPNVRGPVHERLSGKPNLHLIAPLDYVPFVALMRRANVILTDSGGVQEEAPSLGKPVLVMRDVTERPEAVAAGTV ELVGTDAARIVAHVTRILDRADSPSASAARINPYGDGGASRRIVDVLCGRIPLPFHDRAAQRPARMRR
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=369, Percent_Identity=58.8075880758808, Blast_Score=405, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 42412; Mature: 42412
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVMSIFGTRPEAIKMAPLVRAIEASADLSGLVCVTGQHRAMLDQVLSFFGIVPDIDLDV CCCEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEE MVPNQTLNGLMSRVLARLDEALATHRPDYVLVHGDTTTALAATLAAFHRGIPVGHVEAGL EECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHCCC RTYDLTQPWPEEMNRQVVDRMARDLFSPTEQSAAHLRDERAPGRIFVTGNTVIDALLMTL EEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHH GRIDADAELKATLDRQFSFLDPGRRLVLVTGHRRENFGEGFAQICEALAALAQRQDIEIV HCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEE YPVHLNPNVRGPVHERLSGKPNLHLIAPLDYVPFVALMRRANVILTDSGGVQEEAPSLGK EEEECCCCCCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCC PVLVMRDVTERPEAVAAGTVELVGTDAARIVAHVTRILDRADSPSASAARINPYGDGGAS CEEEEECCCCCCCHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCH RRIVDVLCGRIPLPFHDRAAQRPARMRR HHHHHHHHCCCCCCCCHHHHCCCHHCCC >Mature Secondary Structure MKVMSIFGTRPEAIKMAPLVRAIEASADLSGLVCVTGQHRAMLDQVLSFFGIVPDIDLDV CCCEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEE MVPNQTLNGLMSRVLARLDEALATHRPDYVLVHGDTTTALAATLAAFHRGIPVGHVEAGL EECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCHHHCCC RTYDLTQPWPEEMNRQVVDRMARDLFSPTEQSAAHLRDERAPGRIFVTGNTVIDALLMTL EEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHH GRIDADAELKATLDRQFSFLDPGRRLVLVTGHRRENFGEGFAQICEALAALAQRQDIEIV HCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEE YPVHLNPNVRGPVHERLSGKPNLHLIAPLDYVPFVALMRRANVILTDSGGVQEEAPSLGK EEEECCCCCCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCC PVLVMRDVTERPEAVAAGTVELVGTDAARIVAHVTRILDRADSPSASAARINPYGDGGAS CEEEEECCCCCCCHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCH RRIVDVLCGRIPLPFHDRAAQRPARMRR HHHHHHHHCCCCCCCCHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]