| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158424840
Identifier: 158424840
GI number: 158424840
Start: 3681505
End: 3683799
Strand: Direct
Name: 158424840
Synonym: AZC_3216
Alternate gene names: NA
Gene position: 3681505-3683799 (Clockwise)
Preceding gene: 158424839
Following gene: 158424841
Centisome position: 68.56
GC content: 70.02
Gene sequence:
>2295_bases ATGATCGGTCATAGAGCTCTTCAGGCCTCGAAAGGCCGGTCCGTCACGCGTTCGAGGGTCGTAATGTCTGTCCACTACAA CCGTTTCAAGAGCGCGGCCCTCGGCTGCGTGGCGCTCGCCGCGCTGGTGGTCTCCTCTTTTGACATGGCCCGCGCGCAGT CCGCCACGGATCCCGGCGAGACCGCTGCAGCGGCCATCGAGCGCCTCACGGCGCGCGGGCGAGGCGCACGCACCGTTGCG CTCTCGGAACTGGGCATCCGCCGGTCCATCGTGCTGAACGGCATGGATGCGCGCCGCGACCTGTTCCTTCCCGTTCCGGC CGGCGTTCCGATCCGCGATGCCCGCGTGGACCTCGAAGGCCGCTATCTGCGGGGGGAAGGCGGCCGCACCACCTACGTGG CCGCGGTGGACAGCGTGCCGGTGCTCTCCCGCGCCGTGACCGAGGACCAGGGGGCCGTTTCCGCCACGCTGCCGGTGACC GGCGAGCCCCGCCCCAGCGGCTTCGTCAATCTCAACATCGCCTGGTCATCGGTGGTCGGGCGGGATCTGTGCGACGACGA GCGCTCCATCGGCAACGTGCTCGAGATCGATCCGGCGACCCGCTTCACCTATAGCTACGACACGGCCGCCATCCGGGACA TCGCGACAGCCTGGTCGGCGCTGCCCACGAAGCCCGTCATCCTGGTGCCGAACGGCACGCTTCCCCAGGAAGTCTATGAT GCGGCGTGGCGGATCGGCGTGGTGCTCGCCCGAGGCGGCAAGACGGCCCAGATCCGCACCCTTCCGCGGATCGGCGACGA AGTGGACACCACGGGCCTGGCCGTCCCGGCCGCGCTCCAGACGGTAGGTCCCTTCCAGTCACTCGCCCGCGGCGGTCGGG TGCGGATCGCCAGCGATGCGGAAGTGGGCGCCCTTCTCCTGTTGCAGCGTCAGGCCGGCCTCGAGGCCGACATCGTGATC GGCAGCGACAGCTACCGCGCCCAGACGGAGGCCGCCCTTCAGGCTCTGGAAGGCCAGATTGCCGGGCTGTCCACCGATGC CGCCGCCAACATCGCCAAGTGGCGTGCCGAAAGCCGCACGGCCGTCGTCGAAGTCAACGACACCATCCGCCTGCTTCCCG GCGCCGGCCACCCGGTCATTGCCATCACCGCACAGGGCGGCGGCAATGCGGCGGGCTTTCTGTCCGAGCTCTGGCGCCCG CTCGGCCTGGTGCCGGCCGTCCGCGTCGCAGCGGCGAACGGACCCGATTTCGCCAATGCCCCGTCCCTCCCGCTCTCCCT GCTCGGCGGCCGCGCCGGCAGCTTCGACGTTTTGGCCCGCGGCGAATGGAGCGCCACGTTCGACCTGTCCTCCACCTTCA CCGGCGGACGGATTCCCGAAGGCTTCCAGCTTGACGTCTCCGCCGCCCCGGGCGCCGGAACGTCGCCTGCGATCGCCTCG GTGTTCTTCAATGACTTCCTGCTCGGCGCCCGGAGCCTGACCGCCGACGGAAGGCCCGAGCGCATCGCGGTGAGCGTGCC CAACTATGCGCTGCTCGCCCGCAACACCCTGCGCGTGGTGGTCCAGCGTCAGCCGGTAAGCGACCGCTGCCGCGAAGTGC CGCAAGCCTTCCCTGTGGCCGTCCTGCCGTCCAGCCGCGTGATGCTTGCCCAGGCGCCGTCGGCGGTCAGCTTCATCGGC GTCATGCCCCGCCTGTCGGACAAGGCGACGCTCGTGATCCCGCGCGCTTATCTCGCCGATCCCGCGACCCTCGGCCGTGT GATCTCTCTCGCGTATGCCGCCGGCGTCCCGCCGGAGCGCTCCGACTTCACGGTTGTTGCCGACGGCGCCGAGGCTCGGC CGGAAAACGCCTTCCTCGCGGTGGACGCGCGGGTCGCCGGCGTGGAGGGCAAGGTGCATGTGGAAGGTGGCCGCCTCGTC CTCAACGGCTCGGGCAACCGGCCCATGCTGGACGTTTCCGGCCTCTCCCGGCTCGGGGTTGCCGAAGCGGTGAAGTCCGG TGACCGCTACGGCGTCGTCTACCGCACCATCGGCCAGGAGGCCCCGGTTCTCAATCCGAACTTCCTGCTCGGACGCGGCG ACGTCGCCGCGCTCTCAGCCGACGGAACGCTGGTCGCGATCGACACGCAATCCTCCGACGGCGTCGCCGCCGCCACGGAG CGCGATCCCTTCAGCATCTTCACCCAGGTCGGCCGCTCCTTCGGCGCCATCGTGATCGGCGCCGGGATCATCGTCTTCCT TCTCTTCGTGCTGCTTGCCACACTGGCGCGCCGTGCGGCGTCCAGGCGGCAGTGA
Upstream 100 bases:
>100_bases CCAGCCGTCGCATCGTGGACGTGTTGTGCGGACGCATTCCGCTCCCTTTCCATGACCGTGCGGCGCAGCGGCCCGCACGC ATGCGGAGGTAATTTAATAA
Downstream 100 bases:
>100_bases GACGCGATCCGGAAGGGCGGCAGCATGCAGTATTTCCTGACCTACGGGGGCGCCGAATATTACGTCGTCCTGGAATGGGT CGCTGCCGCGACGGCGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 764; Mature: 764
Protein sequence:
>764_residues MIGHRALQASKGRSVTRSRVVMSVHYNRFKSAALGCVALAALVVSSFDMARAQSATDPGETAAAAIERLTARGRGARTVA LSELGIRRSIVLNGMDARRDLFLPVPAGVPIRDARVDLEGRYLRGEGGRTTYVAAVDSVPVLSRAVTEDQGAVSATLPVT GEPRPSGFVNLNIAWSSVVGRDLCDDERSIGNVLEIDPATRFTYSYDTAAIRDIATAWSALPTKPVILVPNGTLPQEVYD AAWRIGVVLARGGKTAQIRTLPRIGDEVDTTGLAVPAALQTVGPFQSLARGGRVRIASDAEVGALLLLQRQAGLEADIVI GSDSYRAQTEAALQALEGQIAGLSTDAAANIAKWRAESRTAVVEVNDTIRLLPGAGHPVIAITAQGGGNAAGFLSELWRP LGLVPAVRVAAANGPDFANAPSLPLSLLGGRAGSFDVLARGEWSATFDLSSTFTGGRIPEGFQLDVSAAPGAGTSPAIAS VFFNDFLLGARSLTADGRPERIAVSVPNYALLARNTLRVVVQRQPVSDRCREVPQAFPVAVLPSSRVMLAQAPSAVSFIG VMPRLSDKATLVIPRAYLADPATLGRVISLAYAAGVPPERSDFTVVADGAEARPENAFLAVDARVAGVEGKVHVEGGRLV LNGSGNRPMLDVSGLSRLGVAEAVKSGDRYGVVYRTIGQEAPVLNPNFLLGRGDVAALSADGTLVAIDTQSSDGVAAATE RDPFSIFTQVGRSFGAIVIGAGIIVFLLFVLLATLARRAASRRQ
Sequences:
>Translated_764_residues MIGHRALQASKGRSVTRSRVVMSVHYNRFKSAALGCVALAALVVSSFDMARAQSATDPGETAAAAIERLTARGRGARTVA LSELGIRRSIVLNGMDARRDLFLPVPAGVPIRDARVDLEGRYLRGEGGRTTYVAAVDSVPVLSRAVTEDQGAVSATLPVT GEPRPSGFVNLNIAWSSVVGRDLCDDERSIGNVLEIDPATRFTYSYDTAAIRDIATAWSALPTKPVILVPNGTLPQEVYD AAWRIGVVLARGGKTAQIRTLPRIGDEVDTTGLAVPAALQTVGPFQSLARGGRVRIASDAEVGALLLLQRQAGLEADIVI GSDSYRAQTEAALQALEGQIAGLSTDAAANIAKWRAESRTAVVEVNDTIRLLPGAGHPVIAITAQGGGNAAGFLSELWRP LGLVPAVRVAAANGPDFANAPSLPLSLLGGRAGSFDVLARGEWSATFDLSSTFTGGRIPEGFQLDVSAAPGAGTSPAIAS VFFNDFLLGARSLTADGRPERIAVSVPNYALLARNTLRVVVQRQPVSDRCREVPQAFPVAVLPSSRVMLAQAPSAVSFIG VMPRLSDKATLVIPRAYLADPATLGRVISLAYAAGVPPERSDFTVVADGAEARPENAFLAVDARVAGVEGKVHVEGGRLV LNGSGNRPMLDVSGLSRLGVAEAVKSGDRYGVVYRTIGQEAPVLNPNFLLGRGDVAALSADGTLVAIDTQSSDGVAAATE RDPFSIFTQVGRSFGAIVIGAGIIVFLLFVLLATLARRAASRRQ >Mature_764_residues MIGHRALQASKGRSVTRSRVVMSVHYNRFKSAALGCVALAALVVSSFDMARAQSATDPGETAAAAIERLTARGRGARTVA LSELGIRRSIVLNGMDARRDLFLPVPAGVPIRDARVDLEGRYLRGEGGRTTYVAAVDSVPVLSRAVTEDQGAVSATLPVT GEPRPSGFVNLNIAWSSVVGRDLCDDERSIGNVLEIDPATRFTYSYDTAAIRDIATAWSALPTKPVILVPNGTLPQEVYD AAWRIGVVLARGGKTAQIRTLPRIGDEVDTTGLAVPAALQTVGPFQSLARGGRVRIASDAEVGALLLLQRQAGLEADIVI GSDSYRAQTEAALQALEGQIAGLSTDAAANIAKWRAESRTAVVEVNDTIRLLPGAGHPVIAITAQGGGNAAGFLSELWRP LGLVPAVRVAAANGPDFANAPSLPLSLLGGRAGSFDVLARGEWSATFDLSSTFTGGRIPEGFQLDVSAAPGAGTSPAIAS VFFNDFLLGARSLTADGRPERIAVSVPNYALLARNTLRVVVQRQPVSDRCREVPQAFPVAVLPSSRVMLAQAPSAVSFIG VMPRLSDKATLVIPRAYLADPATLGRVISLAYAAGVPPERSDFTVVADGAEARPENAFLAVDARVAGVEGKVHVEGGRLV LNGSGNRPMLDVSGLSRLGVAEAVKSGDRYGVVYRTIGQEAPVLNPNFLLGRGDVAALSADGTLVAIDTQSSDGVAAATE RDPFSIFTQVGRSFGAIVIGAGIIVFLLFVLLATLARRAASRRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79816; Mature: 79816
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGHRALQASKGRSVTRSRVVMSVHYNRFKSAALGCVALAALVVSSFDMARAQSATDPGE CCCCHHHCCCCCCCHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH TAAAAIERLTARGRGARTVALSELGIRRSIVLNGMDARRDLFLPVPAGVPIRDARVDLEG HHHHHHHHHHHCCCCCEEEEHHHHCCEEEEEECCCCCCCEEEEECCCCCCCCCCEECCCC RYLRGEGGRTTYVAAVDSVPVLSRAVTEDQGAVSATLPVTGEPRPSGFVNLNIAWSSVVG EEEECCCCCEEEEEEECCCHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEEEHHHHC RDLCDDERSIGNVLEIDPATRFTYSYDTAAIRDIATAWSALPTKPVILVPNGTLPQEVYD CHHCCCHHHCCCEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH AAWRIGVVLARGGKTAQIRTLPRIGDEVDTTGLAVPAALQTVGPFQSLARGGRVRIASDA HHHEEEEEEECCCCEEEEEECCCCCCCCCCCCEEHHHHHHHCCCHHHHHCCCEEEEECCC EVGALLLLQRQAGLEADIVIGSDSYRAQTEAALQALEGQIAGLSTDAAANIAKWRAESRT CCCEEEEEEHHCCCEEEEEECCCCCCHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCCE AVVEVNDTIRLLPGAGHPVIAITAQGGGNAAGFLSELWRPLGLVPAVRVAAANGPDFANA EEEEECCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHEEEECCCCCCCCC PSLPLSLLGGRAGSFDVLARGEWSATFDLSSTFTGGRIPEGFQLDVSAAPGAGTSPAIAS CCCCHHHHCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHHH VFFNDFLLGARSLTADGRPERIAVSVPNYALLARNTLRVVVQRQPVSDRCREVPQAFPVA HHHHHHHHCCHHCCCCCCCCEEEEECCCEEEECCCEEEEEEECCCHHHHHHHCHHHCCEE VLPSSRVMLAQAPSAVSFIGVMPRLSDKATLVIPRAYLADPATLGRVISLAYAAGVPPER ECCCCCEEEEECCCHHHHHHCCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHHCCCCCCC SDFTVVADGAEARPENAFLAVDARVAGVEGKVHVEGGRLVLNGSGNRPMLDVSGLSRLGV CCEEEEECCCCCCCCCEEEEEEEEEECCCCEEEEECCEEEEECCCCCCEEECCCCCHHHH AEAVKSGDRYGVVYRTIGQEAPVLNPNFLLGRGDVAALSADGTLVAIDTQSSDGVAAATE HHHHHCCCCEEEEEEECCCCCCCCCCCEEEECCCEEEEECCCEEEEEECCCCCCEEEECC RDPFSIFTQVGRSFGAIVIGAGIIVFLLFVLLATLARRAASRRQ CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIGHRALQASKGRSVTRSRVVMSVHYNRFKSAALGCVALAALVVSSFDMARAQSATDPGE CCCCHHHCCCCCCCHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH TAAAAIERLTARGRGARTVALSELGIRRSIVLNGMDARRDLFLPVPAGVPIRDARVDLEG HHHHHHHHHHHCCCCCEEEEHHHHCCEEEEEECCCCCCCEEEEECCCCCCCCCCEECCCC RYLRGEGGRTTYVAAVDSVPVLSRAVTEDQGAVSATLPVTGEPRPSGFVNLNIAWSSVVG EEEECCCCCEEEEEEECCCHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEEEEHHHHC RDLCDDERSIGNVLEIDPATRFTYSYDTAAIRDIATAWSALPTKPVILVPNGTLPQEVYD CHHCCCHHHCCCEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH AAWRIGVVLARGGKTAQIRTLPRIGDEVDTTGLAVPAALQTVGPFQSLARGGRVRIASDA HHHEEEEEEECCCCEEEEEECCCCCCCCCCCCEEHHHHHHHCCCHHHHHCCCEEEEECCC EVGALLLLQRQAGLEADIVIGSDSYRAQTEAALQALEGQIAGLSTDAAANIAKWRAESRT CCCEEEEEEHHCCCEEEEEECCCCCCHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCCE AVVEVNDTIRLLPGAGHPVIAITAQGGGNAAGFLSELWRPLGLVPAVRVAAANGPDFANA EEEEECCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHEEEECCCCCCCCC PSLPLSLLGGRAGSFDVLARGEWSATFDLSSTFTGGRIPEGFQLDVSAAPGAGTSPAIAS CCCCHHHHCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHHH VFFNDFLLGARSLTADGRPERIAVSVPNYALLARNTLRVVVQRQPVSDRCREVPQAFPVA HHHHHHHHCCHHCCCCCCCCEEEEECCCEEEECCCEEEEEEECCCHHHHHHHCHHHCCEE VLPSSRVMLAQAPSAVSFIGVMPRLSDKATLVIPRAYLADPATLGRVISLAYAAGVPPER ECCCCCEEEEECCCHHHHHHCCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHHCCCCCCC SDFTVVADGAEARPENAFLAVDARVAGVEGKVHVEGGRLVLNGSGNRPMLDVSGLSRLGV CCEEEEECCCCCCCCCEEEEEEEEEECCCCEEEEECCEEEEECCCCCCEEECCCCCHHHH AEAVKSGDRYGVVYRTIGQEAPVLNPNFLLGRGDVAALSADGTLVAIDTQSSDGVAAATE HHHHHCCCCEEEEEEECCCCCCCCCCCEEEECCCEEEEECCCEEEEEECCCCCCEEEECC RDPFSIFTQVGRSFGAIVIGAGIIVFLLFVLLATLARRAASRRQ CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA