Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is yjgF [C]

Identifier: 158424809

GI number: 158424809

Start: 3643869

End: 3644267

Strand: Reverse

Name: yjgF [C]

Synonym: AZC_3185

Alternate gene names: 158424809

Gene position: 3644267-3643869 (Counterclockwise)

Preceding gene: 158424810

Following gene: 158424807

Centisome position: 67.87

GC content: 64.91

Gene sequence:

>399_bases
ATGATGCACGAGATCCTGCAGCCTGAGGGGTGGGCGAAGCCGATCGGCTACGCCAATGGCGTTCTCGCCCGCGGCCGCCA
GATCTGGGTGGGCGGCCAGATCGGCTGGTCCGCGCACCAGGCCTTCGAAAGCGACGACCTCGTGGATCAGGTCCGCCAGA
CACTGCTCAATATCGTGGCCGTGCTCGCCGAGGGTGGCGCGGAGCCGCAGCATATCGTCTCGATGACCTGGTACTTCGTG
GACAAGCAGGAGTATCTGGCCCGGCTCAAGGAGATTGGTGCGGTCTACCGCGAGGTGCTCGGGCGGCATTACCCTGCCAT
GGCCGCCGTACAGGTGGTGGCGCTGATGGAAGATCGCGCCAAGGTCGAGATTCAGGCCACCGCCGTCGTTCCTGAGTGA

Upstream 100 bases:

>100_bases
ACCGCCCGGCAGGTGCTGGTTGCAACTTCCCTTGAGAGCCATCGGGCGATCCGTTGGCCTGATGACGTGCGCGCCGGTCT
CGCGGCGCATCTGGAGACGA

Downstream 100 bases:

>100_bases
GGGCTGGCGGCCCTGAGATTTCACGGAGTTGTGCGACGTGCCGCGCCTCGTTCCCCGAGGCGCGGCATTAGTCGTAGGGA
TCGGACGGTTGCGGCCGAGT

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Endoribonuclease L-PSP Family Protein; Endoribonuclease; Translation Initiation Inhibitor; Pyrimidine Utilization Protein C; Aerobic 2-Aminobenzoate Metabolism Related Protein; Translational Inhibitor; Endoribonuclease Translation Initiation Inhibitor; Endoribonuclease L-PSP Superfamily

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MMHEILQPEGWAKPIGYANGVLARGRQIWVGGQIGWSAHQAFESDDLVDQVRQTLLNIVAVLAEGGAEPQHIVSMTWYFV
DKQEYLARLKEIGAVYREVLGRHYPAMAAVQVVALMEDRAKVEIQATAVVPE

Sequences:

>Translated_132_residues
MMHEILQPEGWAKPIGYANGVLARGRQIWVGGQIGWSAHQAFESDDLVDQVRQTLLNIVAVLAEGGAEPQHIVSMTWYFV
DKQEYLARLKEIGAVYREVLGRHYPAMAAVQVVALMEDRAKVEIQATAVVPE
>Mature_132_residues
MMHEILQPEGWAKPIGYANGVLARGRQIWVGGQIGWSAHQAFESDDLVDQVRQTLLNIVAVLAEGGAEPQHIVSMTWYFV
DKQEYLARLKEIGAVYREVLGRHYPAMAAVQVVALMEDRAKVEIQATAVVPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14698; Mature: 14698

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHEILQPEGWAKPIGYANGVLARGRQIWVGGQIGWSAHQAFESDDLVDQVRQTLLNIVA
CCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
VLAEGGAEPQHIVSMTWYFVDKQEYLARLKEIGAVYREVLGRHYPAMAAVQVVALMEDRA
HHHCCCCCHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
KVEIQATAVVPE
EEEEEEEEECCC
>Mature Secondary Structure
MMHEILQPEGWAKPIGYANGVLARGRQIWVGGQIGWSAHQAFESDDLVDQVRQTLLNIVA
CCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
VLAEGGAEPQHIVSMTWYFVDKQEYLARLKEIGAVYREVLGRHYPAMAAVQVVALMEDRA
HHHCCCCCHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
KVEIQATAVVPE
EEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA