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The map label for this gene is araC [C]

Identifier: 158424483

GI number: 158424483

Start: 3256328

End: 3257356

Strand: Direct

Name: araC [C]

Synonym: AZC_2859

Alternate gene names: 158424483

Gene position: 3256328-3257356 (Clockwise)

Preceding gene: 158424482

Following gene: 158424484

Centisome position: 60.64

GC content: 69.29

Gene sequence:

>1029_bases
GTGTGGGATCGCAATCCGGTCCGGCTGTCATTGTTGCACATGTTGCCCGCCGTTGCCGGAGACCACGGACTGACGCTTGA
TCCCCTGCTGGCCCGCGCGGGCATTGCCGCGCACGAGGGTCCTGCCGCACCGACCGTCGTGACCCGTGCCCAGATCTGCA
CGCTGCTTCAGGCCGTCGCCCGTCAGACCGGCGACCCGACCATCGGGCTCACGCTTGCCGCCGCCGCCTCGCCGCAGCGC
CTCGGTCTCACGGGACAATCCCTCCTCTCGGGCCGCACGTTGCGGGAATGCCTCTTTTCGCATGCCCGCCACATGCCGGG
GCTGCAGGGCGGGGTTCAGTTCCGGCTTCAGGTCGAGGGCAAGGTGGCTACCTGGCACCACCACATGCTCGACAGCGATC
CGGCCCACGCCAATGTGCTGAACGACGGCGTGGCCGGCTTCATGACGCGGGCGCTGCGGGCGGTGGCCGGGGCTGATGCC
GCCCTCCATGTGGCCCTGCCCCATCGCGCGCCCGCCGCCCAGCACCTCTACGAGGACACCCTCCAGAGCGCCGTAAGCTT
CAGCGGGGGCGACGAACTGGCCCTGAGCTTCGACGCTGATCTGCTGGACCGGCCCAATGCCCTATGGTCCGGCGTGGTCG
AGCCGGATCCCGCTCAGGCGGGCGGGTGGCAGGCGCTGCTGCCGCAGACGGAGGATGACGACCATCTGGTCGCCAGCCTC
CACCTCATCTTCCAGAGCGCGGCCATGTCCGGCCTATTGTCCCTGGCCGACAGCGCCCGGACGCTGGGCTACGCGCCGCG
CAGTCTCCAGCGACGCCTGATGCGCCTCGGCATGACGTTCGAGAGCCTGCTCGACAGCTGGAGACAGGCTCAGGCGCTTC
AGTATCTGGCCCATACGCACTGTTCGGTGGGGAAGGTCGCGCTCGCGCTGGGTTATTCGCACCCGGCCCATTTCGTGCGT
GCCTTCCGGCGCTGGCAGGCCATGACACCCCTCGCCTTCCGGCGCAGCGTCCGGATGCGCATGAGCTGA

Upstream 100 bases:

>100_bases
CGTGGCCGCAGGCATGGGGCCACGATCCCGGCCAGAATTTAGCCACCGCCCTGCTGTCGGATGCCGTAAGCTGCACCGGG
GTAAGGCAGGAGAAGGTGAA

Downstream 100 bases:

>100_bases
CCTCCCGCCTGCGGATGGCGCGAAATGGCAATTGAGCCCCGTACCTCCATCCGATACGCCTTGGAGCCGAGGTCACCCGC
GAAACGGCTGGAAAATCTCA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator; Transcriptional Regulator AraC; Transcriptional Regulator AraC Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; AraC Family Regulatory Protein; Transcriptional Regulator Arac-Like Protein; Transcription Regulator Protein; Ornithine Utilization Regulator; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MWDRNPVRLSLLHMLPAVAGDHGLTLDPLLARAGIAAHEGPAAPTVVTRAQICTLLQAVARQTGDPTIGLTLAAAASPQR
LGLTGQSLLSGRTLRECLFSHARHMPGLQGGVQFRLQVEGKVATWHHHMLDSDPAHANVLNDGVAGFMTRALRAVAGADA
ALHVALPHRAPAAQHLYEDTLQSAVSFSGGDELALSFDADLLDRPNALWSGVVEPDPAQAGGWQALLPQTEDDDHLVASL
HLIFQSAAMSGLLSLADSARTLGYAPRSLQRRLMRLGMTFESLLDSWRQAQALQYLAHTHCSVGKVALALGYSHPAHFVR
AFRRWQAMTPLAFRRSVRMRMS

Sequences:

>Translated_342_residues
MWDRNPVRLSLLHMLPAVAGDHGLTLDPLLARAGIAAHEGPAAPTVVTRAQICTLLQAVARQTGDPTIGLTLAAAASPQR
LGLTGQSLLSGRTLRECLFSHARHMPGLQGGVQFRLQVEGKVATWHHHMLDSDPAHANVLNDGVAGFMTRALRAVAGADA
ALHVALPHRAPAAQHLYEDTLQSAVSFSGGDELALSFDADLLDRPNALWSGVVEPDPAQAGGWQALLPQTEDDDHLVASL
HLIFQSAAMSGLLSLADSARTLGYAPRSLQRRLMRLGMTFESLLDSWRQAQALQYLAHTHCSVGKVALALGYSHPAHFVR
AFRRWQAMTPLAFRRSVRMRMS
>Mature_342_residues
MWDRNPVRLSLLHMLPAVAGDHGLTLDPLLARAGIAAHEGPAAPTVVTRAQICTLLQAVARQTGDPTIGLTLAAAASPQR
LGLTGQSLLSGRTLRECLFSHARHMPGLQGGVQFRLQVEGKVATWHHHMLDSDPAHANVLNDGVAGFMTRALRAVAGADA
ALHVALPHRAPAAQHLYEDTLQSAVSFSGGDELALSFDADLLDRPNALWSGVVEPDPAQAGGWQALLPQTEDDDHLVASL
HLIFQSAAMSGLLSLADSARTLGYAPRSLQRRLMRLGMTFESLLDSWRQAQALQYLAHTHCSVGKVALALGYSHPAHFVR
AFRRWQAMTPLAFRRSVRMRMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36921; Mature: 36921

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWDRNPVRLSLLHMLPAVAGDHGLTLDPLLARAGIAAHEGPAAPTVVTRAQICTLLQAVA
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
RQTGDPTIGLTLAAAASPQRLGLTGQSLLSGRTLRECLFSHARHMPGLQGGVQFRLQVEG
HCCCCCCEEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEECC
KVATWHHHMLDSDPAHANVLNDGVAGFMTRALRAVAGADAALHVALPHRAPAAQHLYEDT
EEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
LQSAVSFSGGDELALSFDADLLDRPNALWSGVVEPDPAQAGGWQALLPQTEDDDHLVASL
HHHHHCCCCCCCEEEEECCHHHHCCCHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHHH
HLIFQSAAMSGLLSLADSARTLGYAPRSLQRRLMRLGMTFESLLDSWRQAQALQYLAHTH
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
CSVGKVALALGYSHPAHFVRAFRRWQAMTPLAFRRSVRMRMS
CCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MWDRNPVRLSLLHMLPAVAGDHGLTLDPLLARAGIAAHEGPAAPTVVTRAQICTLLQAVA
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
RQTGDPTIGLTLAAAASPQRLGLTGQSLLSGRTLRECLFSHARHMPGLQGGVQFRLQVEG
HCCCCCCEEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEECC
KVATWHHHMLDSDPAHANVLNDGVAGFMTRALRAVAGADAALHVALPHRAPAAQHLYEDT
EEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
LQSAVSFSGGDELALSFDADLLDRPNALWSGVVEPDPAQAGGWQALLPQTEDDDHLVASL
HHHHHCCCCCCCEEEEECCHHHHCCCHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHHH
HLIFQSAAMSGLLSLADSARTLGYAPRSLQRRLMRLGMTFESLLDSWRQAQALQYLAHTH
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
CSVGKVALALGYSHPAHFVRAFRRWQAMTPLAFRRSVRMRMS
CCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA