| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424360
Identifier: 158424360
GI number: 158424360
Start: 3105486
End: 3106367
Strand: Direct
Name: 158424360
Synonym: AZC_2736
Alternate gene names: NA
Gene position: 3105486-3106367 (Clockwise)
Preceding gene: 158424359
Following gene: 158424361
Centisome position: 57.83
GC content: 67.91
Gene sequence:
>882_bases ATGCCGGACAATGACGCCTTCGCGCGCCTTCCGCTGGCCCCGGCCAACCGCGCGCCGGCCGCCCCCCTCATCCCCTGGCC GCACGGCAAGCGCGGCGCCATGTTCCTCTCCGCCGACGTGGATGCGGAAAGCGCCTGGACCTCGAAGGACCCGGCCCGCT ACGAGGAACTGGTCACCATGTCCTTCGGCGGCTTCGAGGCGCGCGTGGGCGTGCCGAAGATGCTGGAACTGTTCGACCAG CTGGAGATGAAGGCCACCTTCTTCATCACCGGCTGGAGCGTGGAGGCCCATCCCGCCACCTGCGAGGCGATCCTGAAGGC GGGGCACGAGATCGGCCATCACGGCTTCCACCACATCATGCCCATGCCGGGCCACCCCTCGCTCACGGAGGAAGTGGACC GGGGCCTTGAGACGCTGAAGCGGCGCCTCGGCGTGGTGCCGGTGGGCTATCGCGCGCCCTATGGCGAGAGCTGCGAGGAA CTGCGCGTGCTGCTGAAAGAGCGCGGGCTGAAATATTCCTCCTCCTGGCGCGATGATGTGCGGCCCTATCGCCATGTGTT GGCGGATGGCACGCCGGGCCTCGTCGAGCTTCCGGTCACCATGACCTATGACGACTGGCTCTACGGCCTCACCAACCGCT ATTCGCCGCGCCCGCTGTTCCCGCGCGAGCACGTGCTGTCCATCTGGAAGGACGAGCTTGAGGAAACTGCCGACTGGGGC GGGCTCATCACCACCGTCCTGCACCCGCAAGTGAGCGGGCGGCCCATGCGGCTGAAGCTGCTGCGCGAGTTCCTGACCTG GGTGCGCGATCGCGGCGACATCTGGACCGCCACGGGCGCGGAGATCACCGCCCATTTCGAGGCGCACGAGCCGAAAGCCT GA
Upstream 100 bases:
>100_bases CTCGCGGACGCCCTGCGCGGGCTGATCGCCGATGGCACATACGCCAAGCTGCTGGCCGCCTGGACGCTTTCCCGAAACGG CATTCAAGAGGTCACCATAG
Downstream 100 bases:
>100_bases TCGCCCGCCGACGCTCCCGCCCGGCCCATCTGGCCGGGCGTTCTCCTTCCCCCAACAAGGCCCTGCCCGATGCTGCTCTC CCGGCGCTCCTTCCTGCGTG
Product: polysaccharide deacetylase
Products: NA
Alternate protein names: Polysaccharide Deacetylase Family Protein; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Domain Protein; Hydrolase; Polysaccharide Deacetylase Family; Polysaccharide Deacetylase Domain-Containing Protein; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Deacetylase
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MPDNDAFARLPLAPANRAPAAPLIPWPHGKRGAMFLSADVDAESAWTSKDPARYEELVTMSFGGFEARVGVPKMLELFDQ LEMKATFFITGWSVEAHPATCEAILKAGHEIGHHGFHHIMPMPGHPSLTEEVDRGLETLKRRLGVVPVGYRAPYGESCEE LRVLLKERGLKYSSSWRDDVRPYRHVLADGTPGLVELPVTMTYDDWLYGLTNRYSPRPLFPREHVLSIWKDELEETADWG GLITTVLHPQVSGRPMRLKLLREFLTWVRDRGDIWTATGAEITAHFEAHEPKA
Sequences:
>Translated_293_residues MPDNDAFARLPLAPANRAPAAPLIPWPHGKRGAMFLSADVDAESAWTSKDPARYEELVTMSFGGFEARVGVPKMLELFDQ LEMKATFFITGWSVEAHPATCEAILKAGHEIGHHGFHHIMPMPGHPSLTEEVDRGLETLKRRLGVVPVGYRAPYGESCEE LRVLLKERGLKYSSSWRDDVRPYRHVLADGTPGLVELPVTMTYDDWLYGLTNRYSPRPLFPREHVLSIWKDELEETADWG GLITTVLHPQVSGRPMRLKLLREFLTWVRDRGDIWTATGAEITAHFEAHEPKA >Mature_292_residues PDNDAFARLPLAPANRAPAAPLIPWPHGKRGAMFLSADVDAESAWTSKDPARYEELVTMSFGGFEARVGVPKMLELFDQL EMKATFFITGWSVEAHPATCEAILKAGHEIGHHGFHHIMPMPGHPSLTEEVDRGLETLKRRLGVVPVGYRAPYGESCEEL RVLLKERGLKYSSSWRDDVRPYRHVLADGTPGLVELPVTMTYDDWLYGLTNRYSPRPLFPREHVLSIWKDELEETADWGG LITTVLHPQVSGRPMRLKLLREFLTWVRDRGDIWTATGAEITAHFEAHEPKA
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33056; Mature: 32925
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNDAFARLPLAPANRAPAAPLIPWPHGKRGAMFLSADVDAESAWTSKDPARYEELVTM CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH SFGGFEARVGVPKMLELFDQLEMKATFFITGWSVEAHPATCEAILKAGHEIGHHGFHHIM CCCCEEECCCCHHHHHHHHHHCCEEEEEEEECCEECCCHHHHHHHHCCHHHHCCCHHHCC PMPGHPSLTEEVDRGLETLKRRLGVVPVGYRAPYGESCEELRVLLKERGLKYSSSWRDDV CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHH RPYRHVLADGTPGLVELPVTMTYDDWLYGLTNRYSPRPLFPREHVLSIWKDELEETADWG HHHHHHHCCCCCCEEEEEEEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH GLITTVLHPQVSGRPMRLKLLREFLTWVRDRGDIWTATGAEITAHFEAHEPKA HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCC >Mature Secondary Structure PDNDAFARLPLAPANRAPAAPLIPWPHGKRGAMFLSADVDAESAWTSKDPARYEELVTM CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH SFGGFEARVGVPKMLELFDQLEMKATFFITGWSVEAHPATCEAILKAGHEIGHHGFHHIM CCCCEEECCCCHHHHHHHHHHCCEEEEEEEECCEECCCHHHHHHHHCCHHHHCCCHHHCC PMPGHPSLTEEVDRGLETLKRRLGVVPVGYRAPYGESCEELRVLLKERGLKYSSSWRDDV CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHH RPYRHVLADGTPGLVELPVTMTYDDWLYGLTNRYSPRPLFPREHVLSIWKDELEETADWG HHHHHHHCCCCCCEEEEEEEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH GLITTVLHPQVSGRPMRLKLLREFLTWVRDRGDIWTATGAEITAHFEAHEPKA HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA