| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424041
Identifier: 158424041
GI number: 158424041
Start: 2745215
End: 2745784
Strand: Direct
Name: 158424041
Synonym: AZC_2417
Alternate gene names: NA
Gene position: 2745215-2745784 (Clockwise)
Preceding gene: 158424040
Following gene: 158424042
Centisome position: 51.12
GC content: 63.16
Gene sequence:
>570_bases ATGACGGCCGAGGTGCATACACGCGTGACCGGCGAAGAGCTGGCGGAAACCTTCGAACAGGACGTCGAGGTCGATCTCTC CCCCTACGCCCCCGAAGACTGGATCACGCTGATCCTGTTCTGGGTGATGGCGGGCCTTGTCTTCCTGCAATTCTTCACCC GCTATGTGCTGAACGACAGCTATGCCTGGACCGAGGAAGTGGCGAGCTACACGCTGGTGGGCGTCGTCTTCCTCGGTTCG GCCATGTGCGTGCGCCTCTCGCGGCACATCCAGGTGGACCTGCTCTACCGTTTCCTGCCGCCCCGCGCCGGGCGCGTGGT CGCAACGCTCGTCGATATCATCCGCATCGGCTTCTTCGCTTATGCGAGTTGGCTGCTGTGGCGCTATGTCGGCCTCGTGG GCGACGAGCCCATGGTGATGCTCCAAGGCTCCAAGGGCGTCGTCTACTGGAGCGTGTTCGCCGCCTTCGTGATCATGCTG CTGCGCGCCATCCAGGTGGCGATCGCCAATTTCCGGCGCGGCTACAGCGTGCTCGAACGCCCCGAAGCCTTTGACAATCT GGAGGCCTGA
Upstream 100 bases:
>100_bases AGACCGGCGGGCCGCGCCATTCGCGCGGCCGCCCTGCCCTGCCCCCCGGCGGACCTCAGGAGCCGCCGGGTCCTCTCCTG CCTGACTGCCCGGAGTTCCG
Downstream 100 bases:
>100_bases TCCATGTGGCTGCTGATCGGAGCCTTCCTCTCCCTCATGCTGTTCGGCGTGCCGGTGGCGATTTCCATGGCGGTGTCCTC GCTGCTTTACATCGCCGTCT
Product: C4-dicarboxylate ABC transporter permease
Products: NA
Alternate protein names: C4-Dicarboxylate ABC Transporter Permease Protein; ABC Transporter Permease; C4-Dicarboxylate Transporter Small Subunit
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTAEVHTRVTGEELAETFEQDVEVDLSPYAPEDWITLILFWVMAGLVFLQFFTRYVLNDSYAWTEEVASYTLVGVVFLGS AMCVRLSRHIQVDLLYRFLPPRAGRVVATLVDIIRIGFFAYASWLLWRYVGLVGDEPMVMLQGSKGVVYWSVFAAFVIML LRAIQVAIANFRRGYSVLERPEAFDNLEA
Sequences:
>Translated_189_residues MTAEVHTRVTGEELAETFEQDVEVDLSPYAPEDWITLILFWVMAGLVFLQFFTRYVLNDSYAWTEEVASYTLVGVVFLGS AMCVRLSRHIQVDLLYRFLPPRAGRVVATLVDIIRIGFFAYASWLLWRYVGLVGDEPMVMLQGSKGVVYWSVFAAFVIML LRAIQVAIANFRRGYSVLERPEAFDNLEA >Mature_188_residues TAEVHTRVTGEELAETFEQDVEVDLSPYAPEDWITLILFWVMAGLVFLQFFTRYVLNDSYAWTEEVASYTLVGVVFLGSA MCVRLSRHIQVDLLYRFLPPRAGRVVATLVDIIRIGFFAYASWLLWRYVGLVGDEPMVMLQGSKGVVYWSVFAAFVIMLL RAIQVAIANFRRGYSVLERPEAFDNLEA
Specific function: Unknown
COG id: COG3090
COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21592; Mature: 21461
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEVHTRVTGEELAETFEQDVEVDLSPYAPEDWITLILFWVMAGLVFLQFFTRYVLNDS CCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YAWTEEVASYTLVGVVFLGSAMCVRLSRHIQVDLLYRFLPPRAGRVVATLVDIIRIGFFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH YASWLLWRYVGLVGDEPMVMLQGSKGVVYWSVFAAFVIMLLRAIQVAIANFRRGYSVLER HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PEAFDNLEA CHHHCCCCC >Mature Secondary Structure TAEVHTRVTGEELAETFEQDVEVDLSPYAPEDWITLILFWVMAGLVFLQFFTRYVLNDS CCCHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YAWTEEVASYTLVGVVFLGSAMCVRLSRHIQVDLLYRFLPPRAGRVVATLVDIIRIGFFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH YASWLLWRYVGLVGDEPMVMLQGSKGVVYWSVFAAFVIMLLRAIQVAIANFRRGYSVLER HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PEAFDNLEA CHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA