Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is 158424041

Identifier: 158424041

GI number: 158424041

Start: 2745215

End: 2745784

Strand: Direct

Name: 158424041

Synonym: AZC_2417

Alternate gene names: NA

Gene position: 2745215-2745784 (Clockwise)

Preceding gene: 158424040

Following gene: 158424042

Centisome position: 51.12

GC content: 63.16

Gene sequence:

>570_bases
ATGACGGCCGAGGTGCATACACGCGTGACCGGCGAAGAGCTGGCGGAAACCTTCGAACAGGACGTCGAGGTCGATCTCTC
CCCCTACGCCCCCGAAGACTGGATCACGCTGATCCTGTTCTGGGTGATGGCGGGCCTTGTCTTCCTGCAATTCTTCACCC
GCTATGTGCTGAACGACAGCTATGCCTGGACCGAGGAAGTGGCGAGCTACACGCTGGTGGGCGTCGTCTTCCTCGGTTCG
GCCATGTGCGTGCGCCTCTCGCGGCACATCCAGGTGGACCTGCTCTACCGTTTCCTGCCGCCCCGCGCCGGGCGCGTGGT
CGCAACGCTCGTCGATATCATCCGCATCGGCTTCTTCGCTTATGCGAGTTGGCTGCTGTGGCGCTATGTCGGCCTCGTGG
GCGACGAGCCCATGGTGATGCTCCAAGGCTCCAAGGGCGTCGTCTACTGGAGCGTGTTCGCCGCCTTCGTGATCATGCTG
CTGCGCGCCATCCAGGTGGCGATCGCCAATTTCCGGCGCGGCTACAGCGTGCTCGAACGCCCCGAAGCCTTTGACAATCT
GGAGGCCTGA

Upstream 100 bases:

>100_bases
AGACCGGCGGGCCGCGCCATTCGCGCGGCCGCCCTGCCCTGCCCCCCGGCGGACCTCAGGAGCCGCCGGGTCCTCTCCTG
CCTGACTGCCCGGAGTTCCG

Downstream 100 bases:

>100_bases
TCCATGTGGCTGCTGATCGGAGCCTTCCTCTCCCTCATGCTGTTCGGCGTGCCGGTGGCGATTTCCATGGCGGTGTCCTC
GCTGCTTTACATCGCCGTCT

Product: C4-dicarboxylate ABC transporter permease

Products: NA

Alternate protein names: C4-Dicarboxylate ABC Transporter Permease Protein; ABC Transporter Permease; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTAEVHTRVTGEELAETFEQDVEVDLSPYAPEDWITLILFWVMAGLVFLQFFTRYVLNDSYAWTEEVASYTLVGVVFLGS
AMCVRLSRHIQVDLLYRFLPPRAGRVVATLVDIIRIGFFAYASWLLWRYVGLVGDEPMVMLQGSKGVVYWSVFAAFVIML
LRAIQVAIANFRRGYSVLERPEAFDNLEA

Sequences:

>Translated_189_residues
MTAEVHTRVTGEELAETFEQDVEVDLSPYAPEDWITLILFWVMAGLVFLQFFTRYVLNDSYAWTEEVASYTLVGVVFLGS
AMCVRLSRHIQVDLLYRFLPPRAGRVVATLVDIIRIGFFAYASWLLWRYVGLVGDEPMVMLQGSKGVVYWSVFAAFVIML
LRAIQVAIANFRRGYSVLERPEAFDNLEA
>Mature_188_residues
TAEVHTRVTGEELAETFEQDVEVDLSPYAPEDWITLILFWVMAGLVFLQFFTRYVLNDSYAWTEEVASYTLVGVVFLGSA
MCVRLSRHIQVDLLYRFLPPRAGRVVATLVDIIRIGFFAYASWLLWRYVGLVGDEPMVMLQGSKGVVYWSVFAAFVIMLL
RAIQVAIANFRRGYSVLERPEAFDNLEA

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21592; Mature: 21461

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEVHTRVTGEELAETFEQDVEVDLSPYAPEDWITLILFWVMAGLVFLQFFTRYVLNDS
CCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YAWTEEVASYTLVGVVFLGSAMCVRLSRHIQVDLLYRFLPPRAGRVVATLVDIIRIGFFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
YASWLLWRYVGLVGDEPMVMLQGSKGVVYWSVFAAFVIMLLRAIQVAIANFRRGYSVLER
HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PEAFDNLEA
CHHHCCCCC
>Mature Secondary Structure 
TAEVHTRVTGEELAETFEQDVEVDLSPYAPEDWITLILFWVMAGLVFLQFFTRYVLNDS
CCCHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YAWTEEVASYTLVGVVFLGSAMCVRLSRHIQVDLLYRFLPPRAGRVVATLVDIIRIGFFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
YASWLLWRYVGLVGDEPMVMLQGSKGVVYWSVFAAFVIMLLRAIQVAIANFRRGYSVLER
HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PEAFDNLEA
CHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA