| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158423907
Identifier: 158423907
GI number: 158423907
Start: 2607946
End: 2608587
Strand: Direct
Name: 158423907
Synonym: AZC_2283
Alternate gene names: NA
Gene position: 2607946-2608587 (Clockwise)
Preceding gene: 158423906
Following gene: 158423908
Centisome position: 48.57
GC content: 64.64
Gene sequence:
>642_bases ATGCCTGCGGGGCGTCGGCGTTCCCCTCTCCCGATTAACGGCCGCCGCCCGGAACAGCGCAGGCGAGCGGGCGTTGCCTC CAGGACACCCAAGGAGGCATCCATGAAAAAATACCTGACCGCTGCCGTGGCAGCGGGCGCGATCCTGTGCGCCGCTCCCG TGATGGCCCAGTCGCTCGGGGAGAAGACCGGCGTCAACGCCGCGCTCGGTGTCACGCCCTCCACGCAGGACTTCGTAACG CAGGCCGCCGTCAGCGACATGTTCGAGATCGAGAGCGCAAAGCTCGCGGTGGAACGTACGTCCGATGCTCCCACCAAGGC GTTCGCCCAGCAGATGATCACCGATCACACCAAGACATCGCAGGAACTGAAGGGGCTGGTCTCCTCGGCAAACCTTCAGG TCAACCTGCCGACCAGCCTCGACAAGAGCCATCAGGACAAGCTCGACCGGCTGCGCAGCCTGAATGGCGCGGAATTTACT GACGCCTATCACAAGATGCAGGAAGACGCGCACAAGGACGCCGTATCGCTGTTCAAGCGCTACGCCTCCGGTGGGGAGTC GGCGCCCCTGAAGGACTGGGCGGGCAAGACCCTGCCCGCGCTGGAGCACCACCTGAAGGTCGCGGACGACCTCAACAAGT GA
Upstream 100 bases:
>100_bases GTCCCGGGTCTGCCCCGCATCCGTGGCATGGCGCACCTTCTGGGCATCGGTCATGGAATGGTCCTCGCCTTGCGGCCGAA ACGGCCGGCTCCCCCGGTGA
Downstream 100 bases:
>100_bases AACCGCTCGACTATAGCGGCCCCGTCGCCCCGTCCCGCCGCGCCCGATCGGGCGGAACGAAGCGGCCGCGCCCGGCCATC GTGAAGGAGATGGCGCGGGC
Product: outer membrane protein
Products: NA
Alternate protein names: Outer Membrane Protein-Like Protein; Secreted Protein; Lipoprotein; Exported Protein
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MPAGRRRSPLPINGRRPEQRRRAGVASRTPKEASMKKYLTAAVAAGAILCAAPVMAQSLGEKTGVNAALGVTPSTQDFVT QAAVSDMFEIESAKLAVERTSDAPTKAFAQQMITDHTKTSQELKGLVSSANLQVNLPTSLDKSHQDKLDRLRSLNGAEFT DAYHKMQEDAHKDAVSLFKRYASGGESAPLKDWAGKTLPALEHHLKVADDLNK
Sequences:
>Translated_213_residues MPAGRRRSPLPINGRRPEQRRRAGVASRTPKEASMKKYLTAAVAAGAILCAAPVMAQSLGEKTGVNAALGVTPSTQDFVT QAAVSDMFEIESAKLAVERTSDAPTKAFAQQMITDHTKTSQELKGLVSSANLQVNLPTSLDKSHQDKLDRLRSLNGAEFT DAYHKMQEDAHKDAVSLFKRYASGGESAPLKDWAGKTLPALEHHLKVADDLNK >Mature_212_residues PAGRRRSPLPINGRRPEQRRRAGVASRTPKEASMKKYLTAAVAAGAILCAAPVMAQSLGEKTGVNAALGVTPSTQDFVTQ AAVSDMFEIESAKLAVERTSDAPTKAFAQQMITDHTKTSQELKGLVSSANLQVNLPTSLDKSHQDKLDRLRSLNGAEFTD AYHKMQEDAHKDAVSLFKRYASGGESAPLKDWAGKTLPALEHHLKVADDLNK
Specific function: Unknown
COG id: COG3652
COG function: function code S; Predicted outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22992; Mature: 22861
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAGRRRSPLPINGRRPEQRRRAGVASRTPKEASMKKYLTAAVAAGAILCAAPVMAQSLG CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKTGVNAALGVTPSTQDFVTQAAVSDMFEIESAKLAVERTSDAPTKAFAQQMITDHTKTS HHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH QELKGLVSSANLQVNLPTSLDKSHQDKLDRLRSLNGAEFTDAYHKMQEDAHKDAVSLFKR HHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH YASGGESAPLKDWAGKTLPALEHHLKVADDLNK HHCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PAGRRRSPLPINGRRPEQRRRAGVASRTPKEASMKKYLTAAVAAGAILCAAPVMAQSLG CCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKTGVNAALGVTPSTQDFVTQAAVSDMFEIESAKLAVERTSDAPTKAFAQQMITDHTKTS HHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH QELKGLVSSANLQVNLPTSLDKSHQDKLDRLRSLNGAEFTDAYHKMQEDAHKDAVSLFKR HHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH YASGGESAPLKDWAGKTLPALEHHLKVADDLNK HHCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA