| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is gsiB [H]
Identifier: 158423610
GI number: 158423610
Start: 2289233
End: 2290819
Strand: Reverse
Name: gsiB [H]
Synonym: AZC_1986
Alternate gene names: 158423610
Gene position: 2290819-2289233 (Counterclockwise)
Preceding gene: 158423612
Following gene: 158423609
Centisome position: 42.66
GC content: 63.64
Gene sequence:
>1587_bases ATGCGTCGGCACTTTTCGACCCTTCTCGCCACCGTGATGGTGGGCCTGTGCCTCGGCGCCGCCGCCGATGCCAAGACCTT CCGCTGGGCGCGCGGCCAGGACGCACCCACCCTCGATCCTCACACCGAGAATTCGAACCAGGTCTTCGGCCTGCTGCACC AGTTCTATGAACCGCTCGTGCAGCGCGACGAGACGGGCCAACTGGTGCCCTGCCTCGCGCTGAGCTGGGAACTGAAGCCG AGCGACCCGACTGTCTGGATCTTCAAGCTGCGGCCGAACGTCACCTTTCACAATGGCGACAAGTTCACCGCCGACGACGC CGTCTTCTCCCTGAAGCGCGCCATGGACCCGCTGGCGGGCCTGCGCACCACGCTCGCCGGTGTCACCGACGTGACCAAGG TGGACGACCTCACCATCGAGGTGAAGACGGCGGCCCCCATGCCGCTGCTGGTGAACCAGATCACCAATGTCTTCATGATG GACAAGAAGTGGGCCGAGGCGAACAACGTCGCCCGCCCGCAGGACTTCAAGAACAAGGAAGAGACCTTCGCCGTCCGCAA CGAGAACGGCACCGGTCCCTATATCGTCACCAGCCGCGAGCCGGACTCACGCACGGTGATGAAGCTGAACGACGCCTATT GGGGCAAGGGCCAGTTCCCGCTCCAGGCCACGGACGTCGTCTATAGCGTCATCGCCTCCGGCCCCACCCGCGTCGCCGCC TTGCTCTCGGGCGAGGTGGACTTCGTGCAGGACATGCCGGTGCAGGACATTGATCGCGTGGCCCAGACGCCTGGCCTCAA GGTGAATACGGGCGCCGAAGTCCGCTCCATCTTCTTCGGCCTCAACGGCGGTTCGCCGGAACTGCCCTCCTCCGACGTGA AGGGCAAGAACCCGCTGGCCGACAAGCGCGTGCGCCAGGCCATCGAGATCGCCATCAACCGCGAGGCGATCCAGAAGGTG GTGATGGGCGGCCAGTCCGCCCCCTCCGGCACGCTCATCCCGCCCGGCGTGAACGGTTATTCCAAGGCGCTCGACGCCTA TCCGAAGTGGGACATCGCCAAGGCCAAGGCGCTGATGGCGGAAGCGGGTTATCCGAACGGCTTCACCGTGAAGATGAACT GCCCGAACAACCGGTACATCAATGACGAGAAGATCTGCCAGGCCACCGTCGGCTTCCTCGGCCAGATCGGCATCAAGGCG ACGCTGGATGCCCGCCCCATGGCCCAGCACACGCCCACCATCCTGAAGGACGAGACGGACTTCTACATGCTGGGCTGGGG CGTTGCCTCGTTCGACGCCGCTTATACGCTCGACAGCATCTACCACAGCCGCGACAAGGTCTATGGCGCCTATAACGCCA CCCGCGTCGTCAATCCCGAGCTCGACAAGAAGATCGAGGCGCTCGCAACCGAAGTGGACACCGCCAAGCGCAACGCGCTG CTGGCGGAGGTTCTCGCGCAAGTGAAGGACGAGGCCTACTTCATCCCCATCCATAACCAGCTTCTTGCCTGGGGCATGAA GAAGAACATCGACGTGAAGGTGCAGCCCGAGAACCAGCTGTTCGTGAAGTACGTCAAGATCGACTGA
Upstream 100 bases:
>100_bases TGCGCAAAACCACCCTTGGAGGAATTGTAGCCCGAGGGAAAGCCAGTCTAGCATCCTGCGCCAACGATAAAACCAGAACC TTCCGCTGGAGAATAGCTGA
Downstream 100 bases:
>100_bases CCGGAAACGCGGCCGATCAGGACCTCCTGATCGGCCGCGCCGAATGCCGGGCCCGCGTGGGATCCGGCCTGCCTGCCTTC CGGCCGCTCTCAGGGCGGCC
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MRRHFSTLLATVMVGLCLGAAADAKTFRWARGQDAPTLDPHTENSNQVFGLLHQFYEPLVQRDETGQLVPCLALSWELKP SDPTVWIFKLRPNVTFHNGDKFTADDAVFSLKRAMDPLAGLRTTLAGVTDVTKVDDLTIEVKTAAPMPLLVNQITNVFMM DKKWAEANNVARPQDFKNKEETFAVRNENGTGPYIVTSREPDSRTVMKLNDAYWGKGQFPLQATDVVYSVIASGPTRVAA LLSGEVDFVQDMPVQDIDRVAQTPGLKVNTGAEVRSIFFGLNGGSPELPSSDVKGKNPLADKRVRQAIEIAINREAIQKV VMGGQSAPSGTLIPPGVNGYSKALDAYPKWDIAKAKALMAEAGYPNGFTVKMNCPNNRYINDEKICQATVGFLGQIGIKA TLDARPMAQHTPTILKDETDFYMLGWGVASFDAAYTLDSIYHSRDKVYGAYNATRVVNPELDKKIEALATEVDTAKRNAL LAEVLAQVKDEAYFIPIHNQLLAWGMKKNIDVKVQPENQLFVKYVKID
Sequences:
>Translated_528_residues MRRHFSTLLATVMVGLCLGAAADAKTFRWARGQDAPTLDPHTENSNQVFGLLHQFYEPLVQRDETGQLVPCLALSWELKP SDPTVWIFKLRPNVTFHNGDKFTADDAVFSLKRAMDPLAGLRTTLAGVTDVTKVDDLTIEVKTAAPMPLLVNQITNVFMM DKKWAEANNVARPQDFKNKEETFAVRNENGTGPYIVTSREPDSRTVMKLNDAYWGKGQFPLQATDVVYSVIASGPTRVAA LLSGEVDFVQDMPVQDIDRVAQTPGLKVNTGAEVRSIFFGLNGGSPELPSSDVKGKNPLADKRVRQAIEIAINREAIQKV VMGGQSAPSGTLIPPGVNGYSKALDAYPKWDIAKAKALMAEAGYPNGFTVKMNCPNNRYINDEKICQATVGFLGQIGIKA TLDARPMAQHTPTILKDETDFYMLGWGVASFDAAYTLDSIYHSRDKVYGAYNATRVVNPELDKKIEALATEVDTAKRNAL LAEVLAQVKDEAYFIPIHNQLLAWGMKKNIDVKVQPENQLFVKYVKID >Mature_528_residues MRRHFSTLLATVMVGLCLGAAADAKTFRWARGQDAPTLDPHTENSNQVFGLLHQFYEPLVQRDETGQLVPCLALSWELKP SDPTVWIFKLRPNVTFHNGDKFTADDAVFSLKRAMDPLAGLRTTLAGVTDVTKVDDLTIEVKTAAPMPLLVNQITNVFMM DKKWAEANNVARPQDFKNKEETFAVRNENGTGPYIVTSREPDSRTVMKLNDAYWGKGQFPLQATDVVYSVIASGPTRVAA LLSGEVDFVQDMPVQDIDRVAQTPGLKVNTGAEVRSIFFGLNGGSPELPSSDVKGKNPLADKRVRQAIEIAINREAIQKV VMGGQSAPSGTLIPPGVNGYSKALDAYPKWDIAKAKALMAEAGYPNGFTVKMNCPNNRYINDEKICQATVGFLGQIGIKA TLDARPMAQHTPTILKDETDFYMLGWGVASFDAAYTLDSIYHSRDKVYGAYNATRVVNPELDKKIEALATEVDTAKRNAL LAEVLAQVKDEAYFIPIHNQLLAWGMKKNIDVKVQPENQLFVKYVKID
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=511, Percent_Identity=24.26614481409, Blast_Score=135, Evalue=5e-33, Organism=Escherichia coli, GI1789887, Length=524, Percent_Identity=24.8091603053435, Blast_Score=128, Evalue=9e-31, Organism=Escherichia coli, GI1789966, Length=511, Percent_Identity=26.2230919765166, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1789397, Length=505, Percent_Identity=25.7425742574257, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1787495, Length=526, Percent_Identity=23.574144486692, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI87081878, Length=491, Percent_Identity=23.4215885947047, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1787551, Length=552, Percent_Identity=22.2826086956522, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1787762, Length=528, Percent_Identity=22.5378787878788, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 58228; Mature: 58228
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRHFSTLLATVMVGLCLGAAADAKTFRWARGQDAPTLDPHTENSNQVFGLLHQFYEPLV CCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QRDETGQLVPCLALSWELKPSDPTVWIFKLRPNVTFHNGDKFTADDAVFSLKRAMDPLAG CCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHH LRTTLAGVTDVTKVDDLTIEVKTAAPMPLLVNQITNVFMMDKKWAEANNVARPQDFKNKE HHHHHHCCCCCCEECCEEEEEECCCCCHHHHHHHHHHEEECCCHHCCCCCCCCCCCCCCC ETFAVRNENGTGPYIVTSREPDSRTVMKLNDAYWGKGQFPLQATDVVYSVIASGPTRVAA CEEEEECCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHH LLSGEVDFVQDMPVQDIDRVAQTPGLKVNTGAEVRSIFFGLNGGSPELPSSDVKGKNPLA HHCCCCHHHHCCCHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCH DKRVRQAIEIAINREAIQKVVMGGQSAPSGTLIPPGVNGYSKALDAYPKWDIAKAKALMA HHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHH EAGYPNGFTVKMNCPNNRYINDEKICQATVGFLGQIGIKATLDARPMAQHTPTILKDETD HCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCCEEECCCC FYMLGWGVASFDAAYTLDSIYHSRDKVYGAYNATRVVNPELDKKIEALATEVDTAKRNAL EEEEECCHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHH LAEVLAQVKDEAYFIPIHNQLLAWGMKKNIDVKVQPENQLFVKYVKID HHHHHHHHCCCEEEEEECHHHHHHCCCCCCEEEECCCCCEEEEEEEEC >Mature Secondary Structure MRRHFSTLLATVMVGLCLGAAADAKTFRWARGQDAPTLDPHTENSNQVFGLLHQFYEPLV CCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QRDETGQLVPCLALSWELKPSDPTVWIFKLRPNVTFHNGDKFTADDAVFSLKRAMDPLAG CCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHH LRTTLAGVTDVTKVDDLTIEVKTAAPMPLLVNQITNVFMMDKKWAEANNVARPQDFKNKE HHHHHHCCCCCCEECCEEEEEECCCCCHHHHHHHHHHEEECCCHHCCCCCCCCCCCCCCC ETFAVRNENGTGPYIVTSREPDSRTVMKLNDAYWGKGQFPLQATDVVYSVIASGPTRVAA CEEEEECCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHH LLSGEVDFVQDMPVQDIDRVAQTPGLKVNTGAEVRSIFFGLNGGSPELPSSDVKGKNPLA HHCCCCHHHHCCCHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCH DKRVRQAIEIAINREAIQKVVMGGQSAPSGTLIPPGVNGYSKALDAYPKWDIAKAKALMA HHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHH EAGYPNGFTVKMNCPNNRYINDEKICQATVGFLGQIGIKATLDARPMAQHTPTILKDETD HCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCCEEECCCC FYMLGWGVASFDAAYTLDSIYHSRDKVYGAYNATRVVNPELDKKIEALATEVDTAKRNAL EEEEECCHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHH LAEVLAQVKDEAYFIPIHNQLLAWGMKKNIDVKVQPENQLFVKYVKID HHHHHHHHCCCEEEEEECHHHHHHCCCCCCEEEECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA