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The map label for this gene is omp85 [H]

Identifier: 158423325

GI number: 158423325

Start: 1947608

End: 1950181

Strand: Direct

Name: omp85 [H]

Synonym: AZC_1701

Alternate gene names: 158423325

Gene position: 1947608-1950181 (Clockwise)

Preceding gene: 158423324

Following gene: 158423326

Centisome position: 36.27

GC content: 63.75

Gene sequence:

>2574_bases
TTGGCGCAACGGTCGCGGGAAAAGCGGAAGCCTTTGTTGGGGCGGGCGTTTGCAGTGCACGGAAAAGGCTGTAAAAGCGC
CTCGAAGGTGGAGAATCCGGGGGTGCGCCCCTGGGTTGAGAACAACGAATTCAAGGTTGCGCGCCATATGACTGCTCCGG
CACGGGTGTTCGTAAAACTGGCCGCCGTCCTCGGCATCGCTTTCGCGACCGCGGTGACGACGACCGCCGGATCAATGGTG
GTGGCCTCGCCAGCAATGGCGCAGTCGGCTTCCATCGTGGTGCAGGGGAATCGGCGTGTGGACGCCGATACGATCCGCTC
CTACTTCAATCTCAAGCCCGGCGAGGGCCTGACCTCCGCGAAGATCGACGATGGTGTGAAGGCGCTCTATGCGACCGGCC
TCTTCGCGGACGTCCGGGTCTCGCAGCAGGGTGGCCGCACCGTCGTGACGGTGGTCGAGAACGAGGTGATCAACAAGATC
GCCTTCGAGGGCAACAAGAAGATCAAGGACGAGCAGCTCTCCGGCGAGATCCAGTCGAAGGAGCGCGGTCCCTTCTCCAA
GGCGCTCGTGCAGGCTGATACCCAGCGCATCGTCGATCTCTATCGCCGCACCGGCCGCACCGACGTGAAGGTCAACCCGG
TCACCATCGACCGCGGCAACGGCCGCGTCGACCTCGTCTTCGAGATCAACGAAGGCGAAAAGACCGGCGTGAAGGACATC
AAGTTCGTCGGCAACAAGGCCTTCTCGGACTGGAAGCTGAAGGACGTCATCTCCACGACGACCACCAACTGGCTGTCCTT
CCTGAAGTCCACCGACGTCTATGACGCCGACCGCGTGAACGCCGACCAGGAACTGCTGCGCCGCTTCTACCTGAAGAACG
GCTATGCGGACTTCCGCATCGTGTCGGCCTCCGCCGAGCTCGATCCGGGCGGCGCCGGCTACGTCATCACCATCGTCCTG
GACGAGGGCGCGCAGTACAAGTTCGGCAAGGTGGATGTGGTCTCCAACATCCGCGACGTGCCGGCGTCCAGCCTGCGCAA
CGCCCTGCGCGTGAGCGACGGCCAGATCTACAACGCCGAACTCGTCGAGAAGACGGTCGAGAACCTGACCATCGAGGTGT
CGAAGAGCGGCTACGCCTTCGCCCAGGTGCGTCCGCGTGGCGACCGCGACTTCGAGAACAAGCGCATCAACGTCACGTTC
GTGGTCGAGGAAGGCCCGCGCGTCTACGTCGAGCGCATCGAGATCCGCGGCAACACCCGTACCCGTGACTGGGTTATCCG
CCGCGAGTTCGATATCGGCGAAGGCGATGCCTACAACCGCGTCCTCGTGGACCGCGCCGAGCGCCGCCTGAAGAACCTCG
GCTACTTCAAGACCGTGAAGATCACCAACGAGCCGGGCTCCGCGCCCGACCGCGTGATCCTCGTGGTGACCGTGGAAGAC
CAGCCCACCGGCGAGTTCTCCATCTCCGGCGGCTACTCGACGGCGGACGGCTTCATCGGCTCGGTCTCGCTGGGCGAGAA
GAACTTCCTCGGCCGCGGCCAGTACGTCAGCATCTCCGGCTCTCTCGGCCAGTACTCGCAGGGTGCCCAGTTCTCCTTCA
CCGAGCCGTACTTCCTCGGCTATCGCGTGGCGGCGGGCTTCGACCTCTACTGGAAGGAGACTTCGGCGAACTCGTACACG
GTGTATGACAGCCAGACCATCGGCGGCGGCGTCCGTCTCGGCCTGCCCATCACCGACGAGGTCACGCTGGCTCTGCGCTA
CAACCTCTACCAGCGCGAGCTGAGCCTCCCGAACTGCACGACCTTCTATGGCACCGCCCTCACCGCGCAGAACTGCGGCG
TGTCCTGGGCGATCATCGAGGCCGTGCAGCAGGGCCAGACCATCACCTCCGTGGTGGGCTACACCCTCTCGTTCAACGGG
CTCGACAGCAACATCAACCCGACCAGCGGCCTCTATGCCGAGCTGAAGCAGGACTTCGCTGGTCTGGGTGGTGATGTGAA
CTTCGTTCGCACAACCGGCGATGTCCGCTACTACTATCCGCTGATCTACGACTCGATCCTGTTGCTGCATGGTCAGGCTG
GTTACGTCTCCGCTTGGGGCGGCAAGGACCTCCAGATCATGGACAACTTCTTCATGGGTCCGAATCTGGTCCGCGGCTTC
GCGCCCTCCGGCATCGGTCCGCGCGATCTGGCGAACTACAACCAGGATGCCCTCGGCGGCACGACCTACTGGGGTGCTTC
GGCTGAAGTGCAGTTCCCGCTCTCCTTCCTGCCGAAGGATGTGGGCATGAAGGGCGCCGTCTTCTTCGACGCCGGCTCGG
TCTATGGCTACACCGGCCCGACCACCTTCGCTTCCGCCGGAACGGCCAACTTCACGGTCTGCCCGTCGAACAGCCAGAAC
AAGATGGGCGCCATCTGCGTGGCCGACGACAACGTCATCCGTACCTCGGTCGGCGCCAGCTTGATCTGGCAGTCGCCCTT
CGGTCCGCTGCGCTTCGACTATGCCTGGGCGCTGACGAAGGCCTCCTACGACGACCTGCAGGCGTTCCGCTTCTCCGGCG
GCACCAAGTTCTGA

Upstream 100 bases:

>100_bases
CGCATCGGCCTCGCCATCGTGCTTATGCTCATGGTGTTCGCCACCTGGAACGACGTGGTCCATATCGCCACCATGTGAGT
CCCCACAGGGGCTCGTGGCG

Downstream 100 bases:

>100_bases
TCGTCGTTACATCGGTCCATCACGGGCGTCGCCGGCTGAGGCCGGCGGCGCCCGAACCACATTTTAGGTCATGAGCGAAC
CCGCATTCTTCCCCCTTCCG

Product: outer membrane protein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 857; Mature: 856

Protein sequence:

>857_residues
MAQRSREKRKPLLGRAFAVHGKGCKSASKVENPGVRPWVENNEFKVARHMTAPARVFVKLAAVLGIAFATAVTTTAGSMV
VASPAMAQSASIVVQGNRRVDADTIRSYFNLKPGEGLTSAKIDDGVKALYATGLFADVRVSQQGGRTVVTVVENEVINKI
AFEGNKKIKDEQLSGEIQSKERGPFSKALVQADTQRIVDLYRRTGRTDVKVNPVTIDRGNGRVDLVFEINEGEKTGVKDI
KFVGNKAFSDWKLKDVISTTTTNWLSFLKSTDVYDADRVNADQELLRRFYLKNGYADFRIVSASAELDPGGAGYVITIVL
DEGAQYKFGKVDVVSNIRDVPASSLRNALRVSDGQIYNAELVEKTVENLTIEVSKSGYAFAQVRPRGDRDFENKRINVTF
VVEEGPRVYVERIEIRGNTRTRDWVIRREFDIGEGDAYNRVLVDRAERRLKNLGYFKTVKITNEPGSAPDRVILVVTVED
QPTGEFSISGGYSTADGFIGSVSLGEKNFLGRGQYVSISGSLGQYSQGAQFSFTEPYFLGYRVAAGFDLYWKETSANSYT
VYDSQTIGGGVRLGLPITDEVTLALRYNLYQRELSLPNCTTFYGTALTAQNCGVSWAIIEAVQQGQTITSVVGYTLSFNG
LDSNINPTSGLYAELKQDFAGLGGDVNFVRTTGDVRYYYPLIYDSILLLHGQAGYVSAWGGKDLQIMDNFFMGPNLVRGF
APSGIGPRDLANYNQDALGGTTYWGASAEVQFPLSFLPKDVGMKGAVFFDAGSVYGYTGPTTFASAGTANFTVCPSNSQN
KMGAICVADDNVIRTSVGASLIWQSPFGPLRFDYAWALTKASYDDLQAFRFSGGTKF

Sequences:

>Translated_857_residues
MAQRSREKRKPLLGRAFAVHGKGCKSASKVENPGVRPWVENNEFKVARHMTAPARVFVKLAAVLGIAFATAVTTTAGSMV
VASPAMAQSASIVVQGNRRVDADTIRSYFNLKPGEGLTSAKIDDGVKALYATGLFADVRVSQQGGRTVVTVVENEVINKI
AFEGNKKIKDEQLSGEIQSKERGPFSKALVQADTQRIVDLYRRTGRTDVKVNPVTIDRGNGRVDLVFEINEGEKTGVKDI
KFVGNKAFSDWKLKDVISTTTTNWLSFLKSTDVYDADRVNADQELLRRFYLKNGYADFRIVSASAELDPGGAGYVITIVL
DEGAQYKFGKVDVVSNIRDVPASSLRNALRVSDGQIYNAELVEKTVENLTIEVSKSGYAFAQVRPRGDRDFENKRINVTF
VVEEGPRVYVERIEIRGNTRTRDWVIRREFDIGEGDAYNRVLVDRAERRLKNLGYFKTVKITNEPGSAPDRVILVVTVED
QPTGEFSISGGYSTADGFIGSVSLGEKNFLGRGQYVSISGSLGQYSQGAQFSFTEPYFLGYRVAAGFDLYWKETSANSYT
VYDSQTIGGGVRLGLPITDEVTLALRYNLYQRELSLPNCTTFYGTALTAQNCGVSWAIIEAVQQGQTITSVVGYTLSFNG
LDSNINPTSGLYAELKQDFAGLGGDVNFVRTTGDVRYYYPLIYDSILLLHGQAGYVSAWGGKDLQIMDNFFMGPNLVRGF
APSGIGPRDLANYNQDALGGTTYWGASAEVQFPLSFLPKDVGMKGAVFFDAGSVYGYTGPTTFASAGTANFTVCPSNSQN
KMGAICVADDNVIRTSVGASLIWQSPFGPLRFDYAWALTKASYDDLQAFRFSGGTKF
>Mature_856_residues
AQRSREKRKPLLGRAFAVHGKGCKSASKVENPGVRPWVENNEFKVARHMTAPARVFVKLAAVLGIAFATAVTTTAGSMVV
ASPAMAQSASIVVQGNRRVDADTIRSYFNLKPGEGLTSAKIDDGVKALYATGLFADVRVSQQGGRTVVTVVENEVINKIA
FEGNKKIKDEQLSGEIQSKERGPFSKALVQADTQRIVDLYRRTGRTDVKVNPVTIDRGNGRVDLVFEINEGEKTGVKDIK
FVGNKAFSDWKLKDVISTTTTNWLSFLKSTDVYDADRVNADQELLRRFYLKNGYADFRIVSASAELDPGGAGYVITIVLD
EGAQYKFGKVDVVSNIRDVPASSLRNALRVSDGQIYNAELVEKTVENLTIEVSKSGYAFAQVRPRGDRDFENKRINVTFV
VEEGPRVYVERIEIRGNTRTRDWVIRREFDIGEGDAYNRVLVDRAERRLKNLGYFKTVKITNEPGSAPDRVILVVTVEDQ
PTGEFSISGGYSTADGFIGSVSLGEKNFLGRGQYVSISGSLGQYSQGAQFSFTEPYFLGYRVAAGFDLYWKETSANSYTV
YDSQTIGGGVRLGLPITDEVTLALRYNLYQRELSLPNCTTFYGTALTAQNCGVSWAIIEAVQQGQTITSVVGYTLSFNGL
DSNINPTSGLYAELKQDFAGLGGDVNFVRTTGDVRYYYPLIYDSILLLHGQAGYVSAWGGKDLQIMDNFFMGPNLVRGFA
PSGIGPRDLANYNQDALGGTTYWGASAEVQFPLSFLPKDVGMKGAVFFDAGSVYGYTGPTTFASAGTANFTVCPSNSQNK
MGAICVADDNVIRTSVGASLIWQSPFGPLRFDYAWALTKASYDDLQAFRFSGGTKF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Homo sapiens, GI225543166, Length=412, Percent_Identity=25.7281553398058, Blast_Score=89, Evalue=2e-17,
Organism=Escherichia coli, GI1786374, Length=840, Percent_Identity=28.3333333333333, Blast_Score=271, Evalue=9e-74,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 93790; Mature: 93658

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRSREKRKPLLGRAFAVHGKGCKSASKVENPGVRPWVENNEFKVARHMTAPARVFVKL
CCCCCHHHCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH
AAVLGIAFATAVTTTAGSMVVASPAMAQSASIVVQGNRRVDADTIRSYFNLKPGEGLTSA
HHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCEECHHHHHHHHCCCCCCCCCCC
KIDDGVKALYATGLFADVRVSQQGGRTVVTVVENEVINKIAFEGNKKIKDEQLSGEIQSK
CHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECHHHHHHHHHCCCCCCCCHHHCCCCCCC
ERGPFSKALVQADTQRIVDLYRRTGRTDVKVNPVTIDRGNGRVDLVFEINEGEKTGVKDI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCCCE
KFVGNKAFSDWKLKDVISTTTTNWLSFLKSTDVYDADRVNADQELLRRFYLKNGYADFRI
EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE
VSASAELDPGGAGYVITIVLDEGAQYKFGKVDVVSNIRDVPASSLRNALRVSDGQIYNAE
EEECCCCCCCCCCEEEEEEECCCCCEECCCEEHHHHHHCCCHHHHHHHHCCCCCCEECHH
LVEKTVENLTIEVSKSGYAFAQVRPRGDRDFENKRINVTFVVEEGPRVYVERIEIRGNTR
HHHHHHHCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCC
TRDWVIRREFDIGEGDAYNRVLVDRAERRLKNLGYFKTVKITNEPGSAPDRVILVVTVED
CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEEECC
QPTGEFSISGGYSTADGFIGSVSLGEKNFLGRGQYVSISGSLGQYSQGAQFSFTEPYFLG
CCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCEEEE
YRVAAGFDLYWKETSANSYTVYDSQTIGGGVRLGLPITDEVTLALRYNLYQRELSLPNCT
EEEECCEEEEEEECCCCEEEEEECCCCCCCEEECCCCCCCEEEEEEEEEHHHHCCCCCCC
TFYGTALTAQNCGVSWAIIEAVQQGQTITSVVGYTLSFNGLDSNINPTSGLYAELKQDFA
EEEECEEEECCCCCHHHHHHHHHCCCCEEHHHEEEEEECCCCCCCCCCCHHHHHHHHHHH
GLGGDVNFVRTTGDVRYYYPLIYDSILLLHGQAGYVSAWGGKDLQIMDNFFMGPNLVRGF
CCCCCEEEEEECCCEEEEEHHHHHEEEEEECCCCEEEECCCCCEEEHHHHCCCCHHHHCC
APSGIGPRDLANYNQDALGGTTYWGASAEVQFPLSFLPKDVGMKGAVFFDAGSVYGYTGP
CCCCCCHHHHCCCCCCCCCCCEEECCCCEEECCHHHCCHHCCCCEEEEEECCCEEECCCC
TTFASAGTANFTVCPSNSQNKMGAICVADDNVIRTSVGASLIWQSPFGPLRFDYAWALTK
CCCCCCCCCEEEECCCCCCCCEEEEEEECCCEEEECCCCEEEECCCCCCCEEEEEEEEEC
ASYDDLQAFRFSGGTKF
CCHHHHHHEEECCCCCC
>Mature Secondary Structure 
AQRSREKRKPLLGRAFAVHGKGCKSASKVENPGVRPWVENNEFKVARHMTAPARVFVKL
CCCCHHHCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH
AAVLGIAFATAVTTTAGSMVVASPAMAQSASIVVQGNRRVDADTIRSYFNLKPGEGLTSA
HHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCEECHHHHHHHHCCCCCCCCCCC
KIDDGVKALYATGLFADVRVSQQGGRTVVTVVENEVINKIAFEGNKKIKDEQLSGEIQSK
CHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECHHHHHHHHHCCCCCCCCHHHCCCCCCC
ERGPFSKALVQADTQRIVDLYRRTGRTDVKVNPVTIDRGNGRVDLVFEINEGEKTGVKDI
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCCCE
KFVGNKAFSDWKLKDVISTTTTNWLSFLKSTDVYDADRVNADQELLRRFYLKNGYADFRI
EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE
VSASAELDPGGAGYVITIVLDEGAQYKFGKVDVVSNIRDVPASSLRNALRVSDGQIYNAE
EEECCCCCCCCCCEEEEEEECCCCCEECCCEEHHHHHHCCCHHHHHHHHCCCCCCEECHH
LVEKTVENLTIEVSKSGYAFAQVRPRGDRDFENKRINVTFVVEEGPRVYVERIEIRGNTR
HHHHHHHCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCC
TRDWVIRREFDIGEGDAYNRVLVDRAERRLKNLGYFKTVKITNEPGSAPDRVILVVTVED
CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEEECC
QPTGEFSISGGYSTADGFIGSVSLGEKNFLGRGQYVSISGSLGQYSQGAQFSFTEPYFLG
CCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCEEEE
YRVAAGFDLYWKETSANSYTVYDSQTIGGGVRLGLPITDEVTLALRYNLYQRELSLPNCT
EEEECCEEEEEEECCCCEEEEEECCCCCCCEEECCCCCCCEEEEEEEEEHHHHCCCCCCC
TFYGTALTAQNCGVSWAIIEAVQQGQTITSVVGYTLSFNGLDSNINPTSGLYAELKQDFA
EEEECEEEECCCCCHHHHHHHHHCCCCEEHHHEEEEEECCCCCCCCCCCHHHHHHHHHHH
GLGGDVNFVRTTGDVRYYYPLIYDSILLLHGQAGYVSAWGGKDLQIMDNFFMGPNLVRGF
CCCCCEEEEEECCCEEEEEHHHHHEEEEEECCCCEEEECCCCCEEEHHHHCCCCHHHHCC
APSGIGPRDLANYNQDALGGTTYWGASAEVQFPLSFLPKDVGMKGAVFFDAGSVYGYTGP
CCCCCCHHHHCCCCCCCCCCCEEECCCCEEECCHHHCCHHCCCCEEEEEECCCEEECCCC
TTFASAGTANFTVCPSNSQNKMGAICVADDNVIRTSVGASLIWQSPFGPLRFDYAWALTK
CCCCCCCCCEEEECCCCCCCCEEEEEEECCCEEEECCCCEEEECCCCCCCEEEEEEEEEC
ASYDDLQAFRFSGGTKF
CCHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]