| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yaeL [C]
Identifier: 158423324
GI number: 158423324
Start: 1946362
End: 1947585
Strand: Direct
Name: yaeL [C]
Synonym: AZC_1700
Alternate gene names: 158423324
Gene position: 1946362-1947585 (Clockwise)
Preceding gene: 158423323
Following gene: 158423325
Centisome position: 36.25
GC content: 67.16
Gene sequence:
>1224_bases GTGCCTGGATGCGGATCGGCGGCCGACGGCGGGCGCGGGACGCGTTCGGCGCCGCAGGCCGCGAGCAAGGACGGGATGAT GGACGTGTTGTCGGGACTGGGTTCCATGGGACATTCCCTGCTGGGATATGTGATCCCCTTTCTCTTCGTCCTGACGCTGG TCGTCTTCTTCCATGAGTTGGGGCACTTCTGGGTGGCCCGCCGGGCGGGCGTCCGGGTTCTGACCTTCTCCCTCGGCTTC GGTCCGGAACTCTTCGGCTTCAACGACCGCCACGGCACGCGCTGGCGCCTCGCCGCGATTCCCCTCGGCGGCTTCGTGAA ATTCTATGGCGACGAGGATGCCGCCTCGACGCCTGATCCGGTGAAGCTGGCGCAGATGTCGCCGGCCGAGCGGCGGCAGA GCTTCTTCTACCAGCCCCTGCGCTGGCGCGCGGCCATCGTCGCGGCGGGCCCGGTCGCCAATTTCATCCTGGCGATCGTC ATCTTCGCCTTCGTCTTCATGGTGTTCGGCCGGCAGGTGAGCTCGCCGCGCGTCGATCAGGTGGCGCCCTCCAGCGCCGC CGAGCGGGCGGGCTTCAAGGCGGGCGACCTCATCCTCACCATCGACGGCACGCCGGTGGAGAGCTTCTCCGACATGCAGC GCATCGTCGGTTCCAGCGCCGGCAGCCCGCTCACCTTCAAGGTGGATCGCGGCGGCGCGCCGGTGGAACTGTCCGCCACG CCGGAAATGCGCGAGGTGAAGGACGCCTTCGGCAATGTCCACCGCATGGGCATGCTCGGCATTTCCCGCTCGCTGGCCGC CGCCGACGTGGTGACCCGCCGCTACGGCCCGGTGGAAGCCGTGGCCATGGGCGCGCAGGAGACCTGGTTCGTGGTCGCCC GCACCTTCGATTATCTGGGGGGCCTCATCTCGGGCCGGGAATCGCCCGATCAGCTGGGCGGGCCCATCCGCATCGCCCAG GTATCGGGGCAGGTGGCCACCTTCGGCTTCGGCGCTCTTTTGTCGCTGGCGGCCGTTCTGTCGGTGTCGATTGGACTTCT TAACCTCTTTCCCATCCCGCTGTTGGATGGGGGGCATCTCCTGTTCTACGCTGTGGAGGCAGTTCGCGGGCATCCTCTGA GTCCGCGGGCGCAGGACATTGGCTTTCGCATCGGCCTCGCCATCGTGCTTATGCTCATGGTGTTCGCCACCTGGAACGAC GTGGTCCATATCGCCACCATGTGA
Upstream 100 bases:
>100_bases ACGCCGAGGCGCGGCGCATTGCCCTTTCCCTCTTGCCTAAGTTTGCCGCAAAGGCATCCTAAAGGCAGGGTCAGGCATGC CTCGGCGGTTATGACGGGGT
Downstream 100 bases:
>100_bases GTCCCCACAGGGGCTCGTGGCGTTGGCGCAACGGTCGCGGGAAAAGCGGAAGCCTTTGTTGGGGCGGGCGTTTGCAGTGC ACGGAAAAGGCTGTAAAAGC
Product: membrane-associated zinc metallopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MPGCGSAADGGRGTRSAPQAASKDGMMDVLSGLGSMGHSLLGYVIPFLFVLTLVVFFHELGHFWVARRAGVRVLTFSLGF GPELFGFNDRHGTRWRLAAIPLGGFVKFYGDEDAASTPDPVKLAQMSPAERRQSFFYQPLRWRAAIVAAGPVANFILAIV IFAFVFMVFGRQVSSPRVDQVAPSSAAERAGFKAGDLILTIDGTPVESFSDMQRIVGSSAGSPLTFKVDRGGAPVELSAT PEMREVKDAFGNVHRMGMLGISRSLAAADVVTRRYGPVEAVAMGAQETWFVVARTFDYLGGLISGRESPDQLGGPIRIAQ VSGQVATFGFGALLSLAAVLSVSIGLLNLFPIPLLDGGHLLFYAVEAVRGHPLSPRAQDIGFRIGLAIVLMLMVFATWND VVHIATM
Sequences:
>Translated_407_residues MPGCGSAADGGRGTRSAPQAASKDGMMDVLSGLGSMGHSLLGYVIPFLFVLTLVVFFHELGHFWVARRAGVRVLTFSLGF GPELFGFNDRHGTRWRLAAIPLGGFVKFYGDEDAASTPDPVKLAQMSPAERRQSFFYQPLRWRAAIVAAGPVANFILAIV IFAFVFMVFGRQVSSPRVDQVAPSSAAERAGFKAGDLILTIDGTPVESFSDMQRIVGSSAGSPLTFKVDRGGAPVELSAT PEMREVKDAFGNVHRMGMLGISRSLAAADVVTRRYGPVEAVAMGAQETWFVVARTFDYLGGLISGRESPDQLGGPIRIAQ VSGQVATFGFGALLSLAAVLSVSIGLLNLFPIPLLDGGHLLFYAVEAVRGHPLSPRAQDIGFRIGLAIVLMLMVFATWND VVHIATM >Mature_406_residues PGCGSAADGGRGTRSAPQAASKDGMMDVLSGLGSMGHSLLGYVIPFLFVLTLVVFFHELGHFWVARRAGVRVLTFSLGFG PELFGFNDRHGTRWRLAAIPLGGFVKFYGDEDAASTPDPVKLAQMSPAERRQSFFYQPLRWRAAIVAAGPVANFILAIVI FAFVFMVFGRQVSSPRVDQVAPSSAAERAGFKAGDLILTIDGTPVESFSDMQRIVGSSAGSPLTFKVDRGGAPVELSATP EMREVKDAFGNVHRMGMLGISRSLAAADVVTRRYGPVEAVAMGAQETWFVVARTFDYLGGLISGRESPDQLGGPIRIAQV SGQVATFGFGALLSLAAVLSVSIGLLNLFPIPLLDGGHLLFYAVEAVRGHPLSPRAQDIGFRIGLAIVLMLMVFATWNDV VHIATM
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1786373, Length=229, Percent_Identity=37.9912663755458, Blast_Score=155, Evalue=5e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR004387 - InterPro: IPR008915 [H]
Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 43436; Mature: 43305
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGCGSAADGGRGTRSAPQAASKDGMMDVLSGLGSMGHSLLGYVIPFLFVLTLVVFFHEL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHFWVARRAGVRVLTFSLGFGPELFGFNDRHGTRWRLAAIPLGGFVKFYGDEDAASTPDP HHHHHHHHCCCEEEEEEECCCCHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCC VKLAQMSPAERRQSFFYQPLRWRAAIVAAGPVANFILAIVIFAFVFMVFGRQVSSPRVDQ CEECCCCHHHHHHHHHCCCHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH VAPSSAAERAGFKAGDLILTIDGTPVESFSDMQRIVGSSAGSPLTFKVDRGGAPVELSAT CCCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCC PEMREVKDAFGNVHRMGMLGISRSLAAADVVTRRYGPVEAVAMGAQETWFVVARTFDYLG CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHH GLISGRESPDQLGGPIRIAQVSGQVATFGFGALLSLAAVLSVSIGLLNLFPIPLLDGGHL HHHCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LFYAVEAVRGHPLSPRAQDIGFRIGLAIVLMLMVFATWNDVVHIATM EEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC >Mature Secondary Structure PGCGSAADGGRGTRSAPQAASKDGMMDVLSGLGSMGHSLLGYVIPFLFVLTLVVFFHEL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHFWVARRAGVRVLTFSLGFGPELFGFNDRHGTRWRLAAIPLGGFVKFYGDEDAASTPDP HHHHHHHHCCCEEEEEEECCCCHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCC VKLAQMSPAERRQSFFYQPLRWRAAIVAAGPVANFILAIVIFAFVFMVFGRQVSSPRVDQ CEECCCCHHHHHHHHHCCCHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH VAPSSAAERAGFKAGDLILTIDGTPVESFSDMQRIVGSSAGSPLTFKVDRGGAPVELSAT CCCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCC PEMREVKDAFGNVHRMGMLGISRSLAAADVVTRRYGPVEAVAMGAQETWFVVARTFDYLG CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHH GLISGRESPDQLGGPIRIAQVSGQVATFGFGALLSLAAVLSVSIGLLNLFPIPLLDGGHL HHHCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LFYAVEAVRGHPLSPRAQDIGFRIGLAIVLMLMVFATWNDVVHIATM EEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]