Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is yaeL [C]

Identifier: 158423324

GI number: 158423324

Start: 1946362

End: 1947585

Strand: Direct

Name: yaeL [C]

Synonym: AZC_1700

Alternate gene names: 158423324

Gene position: 1946362-1947585 (Clockwise)

Preceding gene: 158423323

Following gene: 158423325

Centisome position: 36.25

GC content: 67.16

Gene sequence:

>1224_bases
GTGCCTGGATGCGGATCGGCGGCCGACGGCGGGCGCGGGACGCGTTCGGCGCCGCAGGCCGCGAGCAAGGACGGGATGAT
GGACGTGTTGTCGGGACTGGGTTCCATGGGACATTCCCTGCTGGGATATGTGATCCCCTTTCTCTTCGTCCTGACGCTGG
TCGTCTTCTTCCATGAGTTGGGGCACTTCTGGGTGGCCCGCCGGGCGGGCGTCCGGGTTCTGACCTTCTCCCTCGGCTTC
GGTCCGGAACTCTTCGGCTTCAACGACCGCCACGGCACGCGCTGGCGCCTCGCCGCGATTCCCCTCGGCGGCTTCGTGAA
ATTCTATGGCGACGAGGATGCCGCCTCGACGCCTGATCCGGTGAAGCTGGCGCAGATGTCGCCGGCCGAGCGGCGGCAGA
GCTTCTTCTACCAGCCCCTGCGCTGGCGCGCGGCCATCGTCGCGGCGGGCCCGGTCGCCAATTTCATCCTGGCGATCGTC
ATCTTCGCCTTCGTCTTCATGGTGTTCGGCCGGCAGGTGAGCTCGCCGCGCGTCGATCAGGTGGCGCCCTCCAGCGCCGC
CGAGCGGGCGGGCTTCAAGGCGGGCGACCTCATCCTCACCATCGACGGCACGCCGGTGGAGAGCTTCTCCGACATGCAGC
GCATCGTCGGTTCCAGCGCCGGCAGCCCGCTCACCTTCAAGGTGGATCGCGGCGGCGCGCCGGTGGAACTGTCCGCCACG
CCGGAAATGCGCGAGGTGAAGGACGCCTTCGGCAATGTCCACCGCATGGGCATGCTCGGCATTTCCCGCTCGCTGGCCGC
CGCCGACGTGGTGACCCGCCGCTACGGCCCGGTGGAAGCCGTGGCCATGGGCGCGCAGGAGACCTGGTTCGTGGTCGCCC
GCACCTTCGATTATCTGGGGGGCCTCATCTCGGGCCGGGAATCGCCCGATCAGCTGGGCGGGCCCATCCGCATCGCCCAG
GTATCGGGGCAGGTGGCCACCTTCGGCTTCGGCGCTCTTTTGTCGCTGGCGGCCGTTCTGTCGGTGTCGATTGGACTTCT
TAACCTCTTTCCCATCCCGCTGTTGGATGGGGGGCATCTCCTGTTCTACGCTGTGGAGGCAGTTCGCGGGCATCCTCTGA
GTCCGCGGGCGCAGGACATTGGCTTTCGCATCGGCCTCGCCATCGTGCTTATGCTCATGGTGTTCGCCACCTGGAACGAC
GTGGTCCATATCGCCACCATGTGA

Upstream 100 bases:

>100_bases
ACGCCGAGGCGCGGCGCATTGCCCTTTCCCTCTTGCCTAAGTTTGCCGCAAAGGCATCCTAAAGGCAGGGTCAGGCATGC
CTCGGCGGTTATGACGGGGT

Downstream 100 bases:

>100_bases
GTCCCCACAGGGGCTCGTGGCGTTGGCGCAACGGTCGCGGGAAAAGCGGAAGCCTTTGTTGGGGCGGGCGTTTGCAGTGC
ACGGAAAAGGCTGTAAAAGC

Product: membrane-associated zinc metallopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MPGCGSAADGGRGTRSAPQAASKDGMMDVLSGLGSMGHSLLGYVIPFLFVLTLVVFFHELGHFWVARRAGVRVLTFSLGF
GPELFGFNDRHGTRWRLAAIPLGGFVKFYGDEDAASTPDPVKLAQMSPAERRQSFFYQPLRWRAAIVAAGPVANFILAIV
IFAFVFMVFGRQVSSPRVDQVAPSSAAERAGFKAGDLILTIDGTPVESFSDMQRIVGSSAGSPLTFKVDRGGAPVELSAT
PEMREVKDAFGNVHRMGMLGISRSLAAADVVTRRYGPVEAVAMGAQETWFVVARTFDYLGGLISGRESPDQLGGPIRIAQ
VSGQVATFGFGALLSLAAVLSVSIGLLNLFPIPLLDGGHLLFYAVEAVRGHPLSPRAQDIGFRIGLAIVLMLMVFATWND
VVHIATM

Sequences:

>Translated_407_residues
MPGCGSAADGGRGTRSAPQAASKDGMMDVLSGLGSMGHSLLGYVIPFLFVLTLVVFFHELGHFWVARRAGVRVLTFSLGF
GPELFGFNDRHGTRWRLAAIPLGGFVKFYGDEDAASTPDPVKLAQMSPAERRQSFFYQPLRWRAAIVAAGPVANFILAIV
IFAFVFMVFGRQVSSPRVDQVAPSSAAERAGFKAGDLILTIDGTPVESFSDMQRIVGSSAGSPLTFKVDRGGAPVELSAT
PEMREVKDAFGNVHRMGMLGISRSLAAADVVTRRYGPVEAVAMGAQETWFVVARTFDYLGGLISGRESPDQLGGPIRIAQ
VSGQVATFGFGALLSLAAVLSVSIGLLNLFPIPLLDGGHLLFYAVEAVRGHPLSPRAQDIGFRIGLAIVLMLMVFATWND
VVHIATM
>Mature_406_residues
PGCGSAADGGRGTRSAPQAASKDGMMDVLSGLGSMGHSLLGYVIPFLFVLTLVVFFHELGHFWVARRAGVRVLTFSLGFG
PELFGFNDRHGTRWRLAAIPLGGFVKFYGDEDAASTPDPVKLAQMSPAERRQSFFYQPLRWRAAIVAAGPVANFILAIVI
FAFVFMVFGRQVSSPRVDQVAPSSAAERAGFKAGDLILTIDGTPVESFSDMQRIVGSSAGSPLTFKVDRGGAPVELSATP
EMREVKDAFGNVHRMGMLGISRSLAAADVVTRRYGPVEAVAMGAQETWFVVARTFDYLGGLISGRESPDQLGGPIRIAQV
SGQVATFGFGALLSLAAVLSVSIGLLNLFPIPLLDGGHLLFYAVEAVRGHPLSPRAQDIGFRIGLAIVLMLMVFATWNDV
VHIATM

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1786373, Length=229, Percent_Identity=37.9912663755458, Blast_Score=155, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR004387
- InterPro:   IPR008915 [H]

Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 43436; Mature: 43305

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGCGSAADGGRGTRSAPQAASKDGMMDVLSGLGSMGHSLLGYVIPFLFVLTLVVFFHEL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GHFWVARRAGVRVLTFSLGFGPELFGFNDRHGTRWRLAAIPLGGFVKFYGDEDAASTPDP
HHHHHHHHCCCEEEEEEECCCCHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCC
VKLAQMSPAERRQSFFYQPLRWRAAIVAAGPVANFILAIVIFAFVFMVFGRQVSSPRVDQ
CEECCCCHHHHHHHHHCCCHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
VAPSSAAERAGFKAGDLILTIDGTPVESFSDMQRIVGSSAGSPLTFKVDRGGAPVELSAT
CCCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCC
PEMREVKDAFGNVHRMGMLGISRSLAAADVVTRRYGPVEAVAMGAQETWFVVARTFDYLG
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHH
GLISGRESPDQLGGPIRIAQVSGQVATFGFGALLSLAAVLSVSIGLLNLFPIPLLDGGHL
HHHCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LFYAVEAVRGHPLSPRAQDIGFRIGLAIVLMLMVFATWNDVVHIATM
EEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
>Mature Secondary Structure 
PGCGSAADGGRGTRSAPQAASKDGMMDVLSGLGSMGHSLLGYVIPFLFVLTLVVFFHEL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GHFWVARRAGVRVLTFSLGFGPELFGFNDRHGTRWRLAAIPLGGFVKFYGDEDAASTPDP
HHHHHHHHCCCEEEEEEECCCCHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCC
VKLAQMSPAERRQSFFYQPLRWRAAIVAAGPVANFILAIVIFAFVFMVFGRQVSSPRVDQ
CEECCCCHHHHHHHHHCCCHHHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
VAPSSAAERAGFKAGDLILTIDGTPVESFSDMQRIVGSSAGSPLTFKVDRGGAPVELSAT
CCCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCC
PEMREVKDAFGNVHRMGMLGISRSLAAADVVTRRYGPVEAVAMGAQETWFVVARTFDYLG
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHH
GLISGRESPDQLGGPIRIAQVSGQVATFGFGALLSLAAVLSVSIGLLNLFPIPLLDGGHL
HHHCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LFYAVEAVRGHPLSPRAQDIGFRIGLAIVLMLMVFATWNDVVHIATM
EEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]