Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is cdsA [H]

Identifier: 158423322

GI number: 158423322

Start: 1944326

End: 1945144

Strand: Direct

Name: cdsA [H]

Synonym: AZC_1698

Alternate gene names: 158423322

Gene position: 1944326-1945144 (Clockwise)

Preceding gene: 158423321

Following gene: 158423323

Centisome position: 36.21

GC content: 70.09

Gene sequence:

>819_bases
TTGATCCCCGTGGTCATTGGACCGGACCTCAAGCAGCGCACGCTGTCAGCCATCGTGCTCGCCCCCGTGGTTCTCGCGAC
CACCGTCTTCGGCGGGCTGCCTTTCCTTCTGCTCTGGACGCTCGCCGGTACCGGCGTTCTGCTGGAATGGTGCGGGGTTG
CGCGCCTCAGCCCCCGTGTGCCTTATCTCGCCATCGGCTTTGTGGTGATCGCGGCCTGCGCCGGCCTGAAGGCGGTGGGG
CTGCCCGAGAGCGTGCCGCTCGTCCTTCTCGTCGGCCTTGCCGTCTGCGCCCTGCTGGTACGGCCGCGCCTGTGGGCGGC
GCTGGGCCTCGTCTGTGCCGCCGCCTGCGCCTTCCCCGTGGTGGTGCTGCGCGGCGACGATCAGGTGGGCCTCCTCAGCG
TCTTCTTCCTGTTCGCGGTTGTCTGGGGCACCGACATCGGCGCCTATTTCACCGGCCGGATCGTCGGCGGACCGAAGCTC
TGGCCGCGCCTCTCGCCCAACAAGACCTGGTCCGGCGCCATCGGCGGCGCCGTGTTCGGGACGCTGGCGGGCACCGGCGT
CGCGCTGGCGGGCGGGCTGCTCTTCTCGCCCGTGCTGTTCCTCATCGGCCTTCTGCTGAGCGTGATCTCGCAGTCGGGCG
ATCTTGCGGAATCGGCCTTCAAGCGCGCCTTCGGCGTGAAGGATGCCGGCTGGCTCATTCCCGGACACGGCGGCATTCTT
GACCGGCTCGATGGCTTTGCCGCCGCCGCGCTGGCGGCGCTCGTGATCGCCGTGCTTCACGGCGGCCCGACGCCCGCCGC
CGGTCTGCTTCTCTGGTAG

Upstream 100 bases:

>100_bases
TCTACTGGCCGGACTTCGACCATGCGGCGCTGCTCGGGGCGCTTCAGGAATATGCCCGGCGCGACCGCCGGTTCGGCGGA
CTGACCGCCCGCACCGGCAG

Downstream 100 bases:

>100_bases
GACATTGCCATGACTTCGGTTTCCATCCTCGGCGCCACGGGTTCGGTCGGCCGCAGCACCGTCAGGGTGCTGGAGGGGGA
ACGGGAGCGGTTCCGGGTGG

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MIPVVIGPDLKQRTLSAIVLAPVVLATTVFGGLPFLLLWTLAGTGVLLEWCGVARLSPRVPYLAIGFVVIAACAGLKAVG
LPESVPLVLLVGLAVCALLVRPRLWAALGLVCAAACAFPVVVLRGDDQVGLLSVFFLFAVVWGTDIGAYFTGRIVGGPKL
WPRLSPNKTWSGAIGGAVFGTLAGTGVALAGGLLFSPVLFLIGLLLSVISQSGDLAESAFKRAFGVKDAGWLIPGHGGIL
DRLDGFAAAALAALVIAVLHGGPTPAAGLLLW

Sequences:

>Translated_272_residues
MIPVVIGPDLKQRTLSAIVLAPVVLATTVFGGLPFLLLWTLAGTGVLLEWCGVARLSPRVPYLAIGFVVIAACAGLKAVG
LPESVPLVLLVGLAVCALLVRPRLWAALGLVCAAACAFPVVVLRGDDQVGLLSVFFLFAVVWGTDIGAYFTGRIVGGPKL
WPRLSPNKTWSGAIGGAVFGTLAGTGVALAGGLLFSPVLFLIGLLLSVISQSGDLAESAFKRAFGVKDAGWLIPGHGGIL
DRLDGFAAAALAALVIAVLHGGPTPAAGLLLW
>Mature_272_residues
MIPVVIGPDLKQRTLSAIVLAPVVLATTVFGGLPFLLLWTLAGTGVLLEWCGVARLSPRVPYLAIGFVVIAACAGLKAVG
LPESVPLVLLVGLAVCALLVRPRLWAALGLVCAAACAFPVVVLRGDDQVGLLSVFFLFAVVWGTDIGAYFTGRIVGGPKL
WPRLSPNKTWSGAIGGAVFGTLAGTGVALAGGLLFSPVLFLIGLLLSVISQSGDLAESAFKRAFGVKDAGWLIPGHGGIL
DRLDGFAAAALAALVIAVLHGGPTPAAGLLLW

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=125, Percent_Identity=44, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1787677, Length=112, Percent_Identity=40.1785714285714, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 27774; Mature: 27774

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPVVIGPDLKQRTLSAIVLAPVVLATTVFGGLPFLLLWTLAGTGVLLEWCGVARLSPRV
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCHHHCCCCC
PYLAIGFVVIAACAGLKAVGLPESVPLVLLVGLAVCALLVRPRLWAALGLVCAAACAFPV
CHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
VVLRGDDQVGLLSVFFLFAVVWGTDIGAYFTGRIVGGPKLWPRLSPNKTWSGAIGGAVFG
EEEECCCCHHHHHHHHHHHHHHCCCHHHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHHH
TLAGTGVALAGGLLFSPVLFLIGLLLSVISQSGDLAESAFKRAFGVKDAGWLIPGHGGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCHH
DRLDGFAAAALAALVIAVLHGGPTPAAGLLLW
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIPVVIGPDLKQRTLSAIVLAPVVLATTVFGGLPFLLLWTLAGTGVLLEWCGVARLSPRV
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCHHHCCCCC
PYLAIGFVVIAACAGLKAVGLPESVPLVLLVGLAVCALLVRPRLWAALGLVCAAACAFPV
CHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
VVLRGDDQVGLLSVFFLFAVVWGTDIGAYFTGRIVGGPKLWPRLSPNKTWSGAIGGAVFG
EEEECCCCHHHHHHHHHHHHHHCCCHHHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHHH
TLAGTGVALAGGLLFSPVLFLIGLLLSVISQSGDLAESAFKRAFGVKDAGWLIPGHGGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCHH
DRLDGFAAAALAALVIAVLHGGPTPAAGLLLW
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA