| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is cdsA [H]
Identifier: 158423322
GI number: 158423322
Start: 1944326
End: 1945144
Strand: Direct
Name: cdsA [H]
Synonym: AZC_1698
Alternate gene names: 158423322
Gene position: 1944326-1945144 (Clockwise)
Preceding gene: 158423321
Following gene: 158423323
Centisome position: 36.21
GC content: 70.09
Gene sequence:
>819_bases TTGATCCCCGTGGTCATTGGACCGGACCTCAAGCAGCGCACGCTGTCAGCCATCGTGCTCGCCCCCGTGGTTCTCGCGAC CACCGTCTTCGGCGGGCTGCCTTTCCTTCTGCTCTGGACGCTCGCCGGTACCGGCGTTCTGCTGGAATGGTGCGGGGTTG CGCGCCTCAGCCCCCGTGTGCCTTATCTCGCCATCGGCTTTGTGGTGATCGCGGCCTGCGCCGGCCTGAAGGCGGTGGGG CTGCCCGAGAGCGTGCCGCTCGTCCTTCTCGTCGGCCTTGCCGTCTGCGCCCTGCTGGTACGGCCGCGCCTGTGGGCGGC GCTGGGCCTCGTCTGTGCCGCCGCCTGCGCCTTCCCCGTGGTGGTGCTGCGCGGCGACGATCAGGTGGGCCTCCTCAGCG TCTTCTTCCTGTTCGCGGTTGTCTGGGGCACCGACATCGGCGCCTATTTCACCGGCCGGATCGTCGGCGGACCGAAGCTC TGGCCGCGCCTCTCGCCCAACAAGACCTGGTCCGGCGCCATCGGCGGCGCCGTGTTCGGGACGCTGGCGGGCACCGGCGT CGCGCTGGCGGGCGGGCTGCTCTTCTCGCCCGTGCTGTTCCTCATCGGCCTTCTGCTGAGCGTGATCTCGCAGTCGGGCG ATCTTGCGGAATCGGCCTTCAAGCGCGCCTTCGGCGTGAAGGATGCCGGCTGGCTCATTCCCGGACACGGCGGCATTCTT GACCGGCTCGATGGCTTTGCCGCCGCCGCGCTGGCGGCGCTCGTGATCGCCGTGCTTCACGGCGGCCCGACGCCCGCCGC CGGTCTGCTTCTCTGGTAG
Upstream 100 bases:
>100_bases TCTACTGGCCGGACTTCGACCATGCGGCGCTGCTCGGGGCGCTTCAGGAATATGCCCGGCGCGACCGCCGGTTCGGCGGA CTGACCGCCCGCACCGGCAG
Downstream 100 bases:
>100_bases GACATTGCCATGACTTCGGTTTCCATCCTCGGCGCCACGGGTTCGGTCGGCCGCAGCACCGTCAGGGTGCTGGAGGGGGA ACGGGAGCGGTTCCGGGTGG
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MIPVVIGPDLKQRTLSAIVLAPVVLATTVFGGLPFLLLWTLAGTGVLLEWCGVARLSPRVPYLAIGFVVIAACAGLKAVG LPESVPLVLLVGLAVCALLVRPRLWAALGLVCAAACAFPVVVLRGDDQVGLLSVFFLFAVVWGTDIGAYFTGRIVGGPKL WPRLSPNKTWSGAIGGAVFGTLAGTGVALAGGLLFSPVLFLIGLLLSVISQSGDLAESAFKRAFGVKDAGWLIPGHGGIL DRLDGFAAAALAALVIAVLHGGPTPAAGLLLW
Sequences:
>Translated_272_residues MIPVVIGPDLKQRTLSAIVLAPVVLATTVFGGLPFLLLWTLAGTGVLLEWCGVARLSPRVPYLAIGFVVIAACAGLKAVG LPESVPLVLLVGLAVCALLVRPRLWAALGLVCAAACAFPVVVLRGDDQVGLLSVFFLFAVVWGTDIGAYFTGRIVGGPKL WPRLSPNKTWSGAIGGAVFGTLAGTGVALAGGLLFSPVLFLIGLLLSVISQSGDLAESAFKRAFGVKDAGWLIPGHGGIL DRLDGFAAAALAALVIAVLHGGPTPAAGLLLW >Mature_272_residues MIPVVIGPDLKQRTLSAIVLAPVVLATTVFGGLPFLLLWTLAGTGVLLEWCGVARLSPRVPYLAIGFVVIAACAGLKAVG LPESVPLVLLVGLAVCALLVRPRLWAALGLVCAAACAFPVVVLRGDDQVGLLSVFFLFAVVWGTDIGAYFTGRIVGGPKL WPRLSPNKTWSGAIGGAVFGTLAGTGVALAGGLLFSPVLFLIGLLLSVISQSGDLAESAFKRAFGVKDAGWLIPGHGGIL DRLDGFAAAALAALVIAVLHGGPTPAAGLLLW
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=125, Percent_Identity=44, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1787677, Length=112, Percent_Identity=40.1785714285714, Blast_Score=71, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 27774; Mature: 27774
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVVIGPDLKQRTLSAIVLAPVVLATTVFGGLPFLLLWTLAGTGVLLEWCGVARLSPRV CCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCHHHCCCCC PYLAIGFVVIAACAGLKAVGLPESVPLVLLVGLAVCALLVRPRLWAALGLVCAAACAFPV CHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VVLRGDDQVGLLSVFFLFAVVWGTDIGAYFTGRIVGGPKLWPRLSPNKTWSGAIGGAVFG EEEECCCCHHHHHHHHHHHHHHCCCHHHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHHH TLAGTGVALAGGLLFSPVLFLIGLLLSVISQSGDLAESAFKRAFGVKDAGWLIPGHGGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCHH DRLDGFAAAALAALVIAVLHGGPTPAAGLLLW HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MIPVVIGPDLKQRTLSAIVLAPVVLATTVFGGLPFLLLWTLAGTGVLLEWCGVARLSPRV CCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCHHHCCCCC PYLAIGFVVIAACAGLKAVGLPESVPLVLLVGLAVCALLVRPRLWAALGLVCAAACAFPV CHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VVLRGDDQVGLLSVFFLFAVVWGTDIGAYFTGRIVGGPKLWPRLSPNKTWSGAIGGAVFG EEEECCCCHHHHHHHHHHHHHHCCCHHHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHHH TLAGTGVALAGGLLFSPVLFLIGLLLSVISQSGDLAESAFKRAFGVKDAGWLIPGHGGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCHH DRLDGFAAAALAALVIAVLHGGPTPAAGLLLW HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA