| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is mipA
Identifier: 158423278
GI number: 158423278
Start: 1893175
End: 1893972
Strand: Direct
Name: mipA
Synonym: AZC_1654
Alternate gene names: NA
Gene position: 1893175-1893972 (Clockwise)
Preceding gene: 158423277
Following gene: 158423281
Centisome position: 35.26
GC content: 68.17
Gene sequence:
>798_bases ATGAATAAGATCAACGTCCTTTCGCGCGCGCTTCTGGCGGGACTGCTGCTTGCGGCGGCCGGCGCGCCGGCGCTGGCGGA AGACCCGGCTTCCGGCGGCTGGATCGTCACCCTCGGTGTGCAGACCTCCTACGGGCCGAGTTATCCCGGTGCGCGGAACA CCGACATCGGCTTCATGCCGAGCTTCGACATCCGCGACGCGGGCGAGCCGGCGACCTTCGGTGCGCCCGACGATGATCTC TCGATCACCCTGTTCAAGCTGGGCGGCATTTCCATGGGGCCGACCTTCTCGTTGCGCGGCTCGCGACCGAACAACGCGCT GTTCGGACTGCCGGGCTACAGCACGGCGCCGCAATTCGGCGTCTTTGCGGAATTCTGGCCGCTCGATAAGGCCATCCGCC TGCGCGGCGAAATCCGCCAGGGCGTAAAGGAGGATGACGGGATCACCGGGACGCTCGGCCTCGACTGGGTGACCTACGCG GGGCCGCTGACCTTCGGCATCGGCCCGCGCCTCCAGTTCGCCGACAGCTCGGCCATGCAGACCGCCTTCGGCGTCACGCC TCTCACCACCTTCATCAATCCCACGCTGACACCCTACACGCCGGGCGCCGGCGTGACATCCACCGGGCTTGCCGGTTCCG TGGCCTTTTCGCCCGCGCGGTCCTGGACCACGACCCTGTTCGGCGGCTACGACCGCCTCGTCGGCGCCGCCGCCGCGAGC CCCGTGACCAAGCGCCTCGACGGCGTGAACCAGATGACCTTCGGCGTCAGCCTTGAGCGGGAGTTCAGCTTCCCCTAG
Upstream 100 bases:
>100_bases GTGCAGGCGCGCGCGGCCGAGCGGCTCGGCATTACGGAGCGCAGCCTCTGGCATCGGGTCAAGAAGCTGGCGATCAAGGT GTCTCGGGTGGCAGAGCCCC
Downstream 100 bases:
>100_bases GTGAGATTGGGCGAACGCCATGCCGATGGGAGGTCCCGTCCCTCACGCCTCCATCTGGAGCGTGCGGGGGAGTTGGTCGA GCCGGGTGACGCCGAGCAGG
Product: MltA-interacting protein
Products: NA
Alternate protein names: MltA-Interacting MipA; MltA-Interacting Protein MipA; MltA-Interacting Protein; Signal Peptide Protein; MipA Family Outer Membrane Scaffold Protein
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MNKINVLSRALLAGLLLAAAGAPALAEDPASGGWIVTLGVQTSYGPSYPGARNTDIGFMPSFDIRDAGEPATFGAPDDDL SITLFKLGGISMGPTFSLRGSRPNNALFGLPGYSTAPQFGVFAEFWPLDKAIRLRGEIRQGVKEDDGITGTLGLDWVTYA GPLTFGIGPRLQFADSSAMQTAFGVTPLTTFINPTLTPYTPGAGVTSTGLAGSVAFSPARSWTTTLFGGYDRLVGAAAAS PVTKRLDGVNQMTFGVSLEREFSFP
Sequences:
>Translated_265_residues MNKINVLSRALLAGLLLAAAGAPALAEDPASGGWIVTLGVQTSYGPSYPGARNTDIGFMPSFDIRDAGEPATFGAPDDDL SITLFKLGGISMGPTFSLRGSRPNNALFGLPGYSTAPQFGVFAEFWPLDKAIRLRGEIRQGVKEDDGITGTLGLDWVTYA GPLTFGIGPRLQFADSSAMQTAFGVTPLTTFINPTLTPYTPGAGVTSTGLAGSVAFSPARSWTTTLFGGYDRLVGAAAAS PVTKRLDGVNQMTFGVSLEREFSFP >Mature_265_residues MNKINVLSRALLAGLLLAAAGAPALAEDPASGGWIVTLGVQTSYGPSYPGARNTDIGFMPSFDIRDAGEPATFGAPDDDL SITLFKLGGISMGPTFSLRGSRPNNALFGLPGYSTAPQFGVFAEFWPLDKAIRLRGEIRQGVKEDDGITGTLGLDWVTYA GPLTFGIGPRLQFADSSAMQTAFGVTPLTTFINPTLTPYTPGAGVTSTGLAGSVAFSPARSWTTTLFGGYDRLVGAAAAS PVTKRLDGVNQMTFGVSLEREFSFP
Specific function: Unknown
COG id: COG3713
COG function: function code M; Outer membrane protein V
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27670; Mature: 27670
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00501 SPASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKINVLSRALLAGLLLAAAGAPALAEDPASGGWIVTLGVQTSYGPSYPGARNTDIGFMP CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC SFDIRDAGEPATFGAPDDDLSITLFKLGGISMGPTFSLRGSRPNNALFGLPGYSTAPQFG CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCEEECCCCCCCCCCC VFAEFWPLDKAIRLRGEIRQGVKEDDGITGTLGLDWVTYAGPLTFGIGPRLQFADSSAMQ CCHHHCCCCHHHHHHHHHHCCCCCCCCCEEEECCCEEECCCCEEECCCCCEEECCCHHHH TAFGVTPLTTFINPTLTPYTPGAGVTSTGLAGSVAFSPARSWTTTLFGGYDRLVGAAAAS HHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCHHHHHHHHHCC PVTKRLDGVNQMTFGVSLEREFSFP HHHHHHCCCCEEEEEEEEEECCCCC >Mature Secondary Structure MNKINVLSRALLAGLLLAAAGAPALAEDPASGGWIVTLGVQTSYGPSYPGARNTDIGFMP CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC SFDIRDAGEPATFGAPDDDLSITLFKLGGISMGPTFSLRGSRPNNALFGLPGYSTAPQFG CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCEEECCCCCCCCCCC VFAEFWPLDKAIRLRGEIRQGVKEDDGITGTLGLDWVTYAGPLTFGIGPRLQFADSSAMQ CCHHHCCCCHHHHHHHHHHCCCCCCCCCEEEECCCEEECCCCEEECCCCCEEECCCHHHH TAFGVTPLTTFINPTLTPYTPGAGVTSTGLAGSVAFSPARSWTTTLFGGYDRLVGAAAAS HHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCHHHHHHHHHCC PVTKRLDGVNQMTFGVSLEREFSFP HHHHHHCCCCEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA