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The map label for this gene is virR [H]

Identifier: 158423281

GI number: 158423281

Start: 1896100

End: 1896603

Strand: Direct

Name: virR [H]

Synonym: AZC_1657

Alternate gene names: 158423281

Gene position: 1896100-1896603 (Clockwise)

Preceding gene: 158423278

Following gene: 158423282

Centisome position: 35.31

GC content: 70.63

Gene sequence:

>504_bases
ATGTCCGCGTCCCTGTCCAGCCTTCCGTTGTCGCCCGGCCGTCCGGAGGATATCCGCCCCGGTGAGCAGGCGGTGGCCCT
GCCGCCCGATTTCGATGCCGGCCTCTATTTCATCGGCCGCATCCGCACCCCGTTTGCCGATCGCGCGGCCTGTCCCAAGC
GCGCGTCGCCGGACGGGCCGGTCTGCACGCTGGAGTTCGATGCCCGCTGGGCCGATGCGCTGACCGGCGTCGCGCCGGGC
AGCCGGGCGCAGGTGCTCTACTGGATGGATCGGGCGCGGCGCGATCTGGTGCTCCAGAGCCCCCGGCGCGACGGCACCAC
CACCGGCACCTTCTCCGTGCGCTCGCCGGTGCGGCCCAATCCGATCGCTTCCTCCATCGTAGAGGTCGTGGCGGTCGACG
GACTGCGGGTTTCCGTGCGCAGCCTCGATTGCGTAGACGGCACGCCGCTCCTTGACCTCAAGCCCGATTATTGCGGCTTC
GCCCACGCGCCGGGAGCCGAATGA

Upstream 100 bases:

>100_bases
TCGCGGGACGGCTGCATGAGCGGGGCTCCTCTGGGGAAGGTGGGCGGCGGGACTCACCCCGAGGCGGCGCGCCGGATATG
ATGGGCGGGAGGAGAGCCCC

Downstream 100 bases:

>100_bases
TGTCGCTCTCCGATGCCGATGCGCTGGTCCATGGCGGCGACGACGGCGCTGGCCGTCACAGCTACGCCTTCCGCCCGCGG
ATGATCGGCGCCGCCACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSASLSSLPLSPGRPEDIRPGEQAVALPPDFDAGLYFIGRIRTPFADRAACPKRASPDGPVCTLEFDARWADALTGVAPG
SRAQVLYWMDRARRDLVLQSPRRDGTTTGTFSVRSPVRPNPIASSIVEVVAVDGLRVSVRSLDCVDGTPLLDLKPDYCGF
AHAPGAE

Sequences:

>Translated_167_residues
MSASLSSLPLSPGRPEDIRPGEQAVALPPDFDAGLYFIGRIRTPFADRAACPKRASPDGPVCTLEFDARWADALTGVAPG
SRAQVLYWMDRARRDLVLQSPRRDGTTTGTFSVRSPVRPNPIASSIVEVVAVDGLRVSVRSLDCVDGTPLLDLKPDYCGF
AHAPGAE
>Mature_166_residues
SASLSSLPLSPGRPEDIRPGEQAVALPPDFDAGLYFIGRIRTPFADRAACPKRASPDGPVCTLEFDARWADALTGVAPGS
RAQVLYWMDRARRDLVLQSPRRDGTTTGTFSVRSPVRPNPIASSIVEVVAVDGLRVSVRSLDCVDGTPLLDLKPDYCGFA
HAPGAE

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Escherichia coli, GI1786393, Length=138, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 17876; Mature: 17745

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASLSSLPLSPGRPEDIRPGEQAVALPPDFDAGLYFIGRIRTPFADRAACPKRASPDGP
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
VCTLEFDARWADALTGVAPGSRAQVLYWMDRARRDLVLQSPRRDGTTTGTFSVRSPVRPN
EEEEEECCCHHHHHHCCCCCCCCEEEEEEHHHHHHHEEECCCCCCCCCEEEEECCCCCCC
PIASSIVEVVAVDGLRVSVRSLDCVDGTPLLDLKPDYCGFAHAPGAE
HHHHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SASLSSLPLSPGRPEDIRPGEQAVALPPDFDAGLYFIGRIRTPFADRAACPKRASPDGP
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
VCTLEFDARWADALTGVAPGSRAQVLYWMDRARRDLVLQSPRRDGTTTGTFSVRSPVRPN
EEEEEECCCHHHHHHCCCCCCCCEEEEEEHHHHHHHEEECCCCCCCCCEEEEECCCCCCC
PIASSIVEVVAVDGLRVSVRSLDCVDGTPLLDLKPDYCGFAHAPGAE
HHHHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA