Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is 158423111

Identifier: 158423111

GI number: 158423111

Start: 1687647

End: 1688864

Strand: Direct

Name: 158423111

Synonym: AZC_1487

Alternate gene names: NA

Gene position: 1687647-1688864 (Clockwise)

Preceding gene: 158423107

Following gene: 158423113

Centisome position: 31.43

GC content: 72.5

Gene sequence:

>1218_bases
ATGTTGTTCGCAATGATTGAACGGAAAAACACCCTCTCCGCCCTCGCGCCCCGCGCCACAGCGGCCCTGATGCTGGCCGC
ATGCGGCCTCGCGCCCGCGTTCGCGGCGTCCGATCCGGTGCAGCGTCCCTCCCTCTATTCGGCCACCGCACGGATGCGGG
CGGTGCCGCTGCCCCTGCCGCGCCCGCCGGAACTGGAAGAGGAGGACGCCCAGCAGGCCGGCGCCGAGGACGGCGCCCAG
AACCACGGGCAGGCCGTGGCCTCGCTGCCGTCCAACCCGCCCTCGCTCTATACGACGGCGGCGCCGCCCAATCCGCAGCA
GGCCTATGCGGTCGAGCCGCCGCCGGTGGCCGCCCGAAGCTTCGTCCTGCCGCCACCCCTGCCGGAAAGCCCTCACACGC
TGGAGGCCAATCGCGCGCCGCCCGGCAATCTGCCCGCCGCCTGCGCGAGCCTCGTGCAGCAGAACATCATGGTCGCCGCC
GCCGCTCCGCCCATCGGTGGCGGCAAGGGAGCCTGCGCGGTGCCGAGCCCGGTCCAGCTCAGCGCCGTGCGGCTGGAGGA
CGGCACCACGGTCACGCTCCAGCCGGCGGCGACGCTGCGCTGCGACGCGGCGGTGGCCGTCACTCAATGGGTGCGCGAGG
ATCTCTCGCGGGCGGCGATGGAACTGGGCGGGCGGCTCGACACGGTGAAGGTCGCCGCCTCCTATGACTGCCGCTCCCGC
AACCGCATCGCCGGCGCCAAGATCAGCGACCACGGCATGGGCATCGCCATGGACGTGGGCGGCGTCGTGCTGGACGACAA
GCGCGTCTATGAGGTGAAAGGCAACGGCCTGCCCATGGCGTTGCAGGCCTCCATGAAGGCCTCCGCCTGCTCGCGCTTCA
CCACCGTGCTCGGGCCGGGATCGGACGGCTATCACGAGGACCATGTCCATGTGGACCTCGCCCAGCGCTATCTGAACATT
CGCCTGTGCCGCTGGGAAATCCGTCCCACCTCCATCGCGCTGCCGCGCTCCCTGCCGGGTGCAGGGGCCTCCGTTGCGGT
GGCGTCCGCGCCGGCGAGCCCGCAGGCCACCGCCGAGGCGGTGGTGAGCGCGCAAGCCGGCACAGCCACCTTCCAGACCG
GGGAAGAGGCGATGGTGGAAGAGGACGTGCCTCTGCCCCTGCCGCGCCCGCCCATCGCCGCCAACGGCCGCCAGCCGGCA
CGGCGCACCGGCGGCTGA

Upstream 100 bases:

>100_bases
GTCCTTGTCGAACAGGAGCGCCTTCAGGCCGGTCATGGGGAGCTTCGTTCCGTGGAGCGGTAAGGGAGGGGCGGTGACGC
CGGAGAGGGCGTCATTTACT

Downstream 100 bases:

>100_bases
CCGGGGTCCGGCGCGGACAGGACCGCGCCGTCGCCCCCTCAGCGGGCGCGGGGCCGCAGATGGTCCCGCGTGCTGCTCAG
GGCCTGTGCCGTCTCGATCA

Product: extensin-like protein

Products: NA

Alternate protein names: Extensin-Like; Extensin-Like Protein; Extensin-Like Protein C-Terminus

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MLFAMIERKNTLSALAPRATAALMLAACGLAPAFAASDPVQRPSLYSATARMRAVPLPLPRPPELEEEDAQQAGAEDGAQ
NHGQAVASLPSNPPSLYTTAAPPNPQQAYAVEPPPVAARSFVLPPPLPESPHTLEANRAPPGNLPAACASLVQQNIMVAA
AAPPIGGGKGACAVPSPVQLSAVRLEDGTTVTLQPAATLRCDAAVAVTQWVREDLSRAAMELGGRLDTVKVAASYDCRSR
NRIAGAKISDHGMGIAMDVGGVVLDDKRVYEVKGNGLPMALQASMKASACSRFTTVLGPGSDGYHEDHVHVDLAQRYLNI
RLCRWEIRPTSIALPRSLPGAGASVAVASAPASPQATAEAVVSAQAGTATFQTGEEAMVEEDVPLPLPRPPIAANGRQPA
RRTGG

Sequences:

>Translated_405_residues
MLFAMIERKNTLSALAPRATAALMLAACGLAPAFAASDPVQRPSLYSATARMRAVPLPLPRPPELEEEDAQQAGAEDGAQ
NHGQAVASLPSNPPSLYTTAAPPNPQQAYAVEPPPVAARSFVLPPPLPESPHTLEANRAPPGNLPAACASLVQQNIMVAA
AAPPIGGGKGACAVPSPVQLSAVRLEDGTTVTLQPAATLRCDAAVAVTQWVREDLSRAAMELGGRLDTVKVAASYDCRSR
NRIAGAKISDHGMGIAMDVGGVVLDDKRVYEVKGNGLPMALQASMKASACSRFTTVLGPGSDGYHEDHVHVDLAQRYLNI
RLCRWEIRPTSIALPRSLPGAGASVAVASAPASPQATAEAVVSAQAGTATFQTGEEAMVEEDVPLPLPRPPIAANGRQPA
RRTGG
>Mature_405_residues
MLFAMIERKNTLSALAPRATAALMLAACGLAPAFAASDPVQRPSLYSATARMRAVPLPLPRPPELEEEDAQQAGAEDGAQ
NHGQAVASLPSNPPSLYTTAAPPNPQQAYAVEPPPVAARSFVLPPPLPESPHTLEANRAPPGNLPAACASLVQQNIMVAA
AAPPIGGGKGACAVPSPVQLSAVRLEDGTTVTLQPAATLRCDAAVAVTQWVREDLSRAAMELGGRLDTVKVAASYDCRSR
NRIAGAKISDHGMGIAMDVGGVVLDDKRVYEVKGNGLPMALQASMKASACSRFTTVLGPGSDGYHEDHVHVDLAQRYLNI
RLCRWEIRPTSIALPRSLPGAGASVAVASAPASPQATAEAVVSAQAGTATFQTGEEAMVEEDVPLPLPRPPIAANGRQPA
RRTGG

Specific function: Unknown

COG id: COG3921

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41924; Mature: 41924

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFAMIERKNTLSALAPRATAALMLAACGLAPAFAASDPVQRPSLYSATARMRAVPLPLP
CEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHEEECCCCC
RPPELEEEDAQQAGAEDGAQNHGQAVASLPSNPPSLYTTAAPPNPQQAYAVEPPPVAARS
CCCCCCHHHHHHCCCCCCCHHCCCEEEECCCCCCCEEEECCCCCCCCEEEECCCCCCCCC
FVLPPPLPESPHTLEANRAPPGNLPAACASLVQQNIMVAAAAPPIGGGKGACAVPSPVQL
EECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCEE
SAVRLEDGTTVTLQPAATLRCDAAVAVTQWVREDLSRAAMELGGRLDTVKVAASYDCRSR
EEEEECCCCEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
NRIAGAKISDHGMGIAMDVGGVVLDDKRVYEVKGNGLPMALQASMKASACSRFTTVLGPG
CCCCCCEECCCCCEEEEECCCEEECCCEEEEECCCCCCEEEHHHHHHHHHHHHHEEECCC
SDGYHEDHVHVDLAQRYLNIRLCRWEIRPTSIALPRSLPGAGASVAVASAPASPQATAEA
CCCCCCCCEEHHHHHHHHEEEEEEEEECCCEEECCCCCCCCCCEEEEECCCCCCHHHHHH
VVSAQAGTATFQTGEEAMVEEDVPLPLPRPPIAANGRQPARRTGG
HHHCCCCCCEECCCCHHHHCCCCCCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MLFAMIERKNTLSALAPRATAALMLAACGLAPAFAASDPVQRPSLYSATARMRAVPLPLP
CEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHEEECCCCC
RPPELEEEDAQQAGAEDGAQNHGQAVASLPSNPPSLYTTAAPPNPQQAYAVEPPPVAARS
CCCCCCHHHHHHCCCCCCCHHCCCEEEECCCCCCCEEEECCCCCCCCEEEECCCCCCCCC
FVLPPPLPESPHTLEANRAPPGNLPAACASLVQQNIMVAAAAPPIGGGKGACAVPSPVQL
EECCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCEE
SAVRLEDGTTVTLQPAATLRCDAAVAVTQWVREDLSRAAMELGGRLDTVKVAASYDCRSR
EEEEECCCCEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
NRIAGAKISDHGMGIAMDVGGVVLDDKRVYEVKGNGLPMALQASMKASACSRFTTVLGPG
CCCCCCEECCCCCEEEEECCCEEECCCEEEEECCCCCCEEEHHHHHHHHHHHHHEEECCC
SDGYHEDHVHVDLAQRYLNIRLCRWEIRPTSIALPRSLPGAGASVAVASAPASPQATAEA
CCCCCCCCEEHHHHHHHHEEEEEEEEECCCEEECCCCCCCCCCEEEEECCCCCCHHHHHH
VVSAQAGTATFQTGEEAMVEEDVPLPLPRPPIAANGRQPARRTGG
HHHCCCCCCEECCCCHHHHCCCCCCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA