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The map label for this gene is tetR [C]

Identifier: 158423002

GI number: 158423002

Start: 1560616

End: 1561194

Strand: Direct

Name: tetR [C]

Synonym: AZC_1378

Alternate gene names: 158423002

Gene position: 1560616-1561194 (Clockwise)

Preceding gene: 158423001

Following gene: 158423003

Centisome position: 29.06

GC content: 68.05

Gene sequence:

>579_bases
ATGCGCAAGAGCAGGGAAGACACAGCCGAGAGCCGCAGGCGGATCCTCAAGGAAGCCAGCCGGCTCTATCGGGAGAAAGG
CTTCGATGGCGTCAGCGTTGCCGACATCATGCAGGCCGCCGGCATGACCCATGGCGGCTTCTACCGGCACTTCCCCTCCA
AGGAAGCCTTGATCGCCGAGGCCATGGCCGAAGCGTTCACGGACCGGACGGCCCCCCTCACGCCGCAGGGGGACGTCTCG
GGCACCGGCCTCATTCGCGGGTACATCGAGATGTATCTCTCGCAGTCGCATCTTGATCGTCCCGGCATGGGGTGCCCGAT
CGCCTCCGTCGGCAGCGAGGCTGGCCATGTGGGCGGCTCCGTTTCGGAGGTCTTCAACACCGGCATCCAGCGGGTTGTTG
AGGGCATTGCTGCGGCGCTGGGCGGCCCGCGTGAGGAGCACCGCGCCGAGGCCGTGCGGCTGCTTGCGACCCTCGTGGGC
GCCGTCGTCATCTCCCGCGCGGTCGGGACCGGCTCCGGTCTTCGGGCCGAAGTGCTGGATGCCGTCCGCAAGGACACCGA
GATCGCCCGCCTCCTGTAG

Upstream 100 bases:

>100_bases
CCCCCTCGCGGCCGGCGGGACGGCGGCTGAAATCTCCGCCTTTTTGTCGTATTAAAAGATGATGGATGTCATCTAAATTC
GACGTCGTGGAGAGGGCACC

Downstream 100 bases:

>100_bases
CACCTGAACCGCCGTCCGTCGGGACGACATCGAAACGAAGGCCTCACCGCGTGCACACCTGAGCACGCGGCAGGGCCGGC
TTGACCCATCGCACACCCGC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Tetr Family; Transcriptional Regulator Protein; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; TetR Family Regulatory Protein; HTH-Type Transcriptional Regulator; TetR Family Regulator; Transcription Regulator Protein; TetR Family Transcription Regulatory Protein; Transcriptional Regulatory Protein TetR Family; TetR/AcrR Family Transcriptional Regulator; Orf_Bo

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MRKSREDTAESRRRILKEASRLYREKGFDGVSVADIMQAAGMTHGGFYRHFPSKEALIAEAMAEAFTDRTAPLTPQGDVS
GTGLIRGYIEMYLSQSHLDRPGMGCPIASVGSEAGHVGGSVSEVFNTGIQRVVEGIAAALGGPREEHRAEAVRLLATLVG
AVVISRAVGTGSGLRAEVLDAVRKDTEIARLL

Sequences:

>Translated_192_residues
MRKSREDTAESRRRILKEASRLYREKGFDGVSVADIMQAAGMTHGGFYRHFPSKEALIAEAMAEAFTDRTAPLTPQGDVS
GTGLIRGYIEMYLSQSHLDRPGMGCPIASVGSEAGHVGGSVSEVFNTGIQRVVEGIAAALGGPREEHRAEAVRLLATLVG
AVVISRAVGTGSGLRAEVLDAVRKDTEIARLL
>Mature_192_residues
MRKSREDTAESRRRILKEASRLYREKGFDGVSVADIMQAAGMTHGGFYRHFPSKEALIAEAMAEAFTDRTAPLTPQGDVS
GTGLIRGYIEMYLSQSHLDRPGMGCPIASVGSEAGHVGGSVSEVFNTGIQRVVEGIAAALGGPREEHRAEAVRLLATLVG
AVVISRAVGTGSGLRAEVLDAVRKDTEIARLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20451; Mature: 20451

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSREDTAESRRRILKEASRLYREKGFDGVSVADIMQAAGMTHGGFYRHFPSKEALIAE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHH
AMAEAFTDRTAPLTPQGDVSGTGLIRGYIEMYLSQSHLDRPGMGCPIASVGSEAGHVGGS
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHCCCH
VSEVFNTGIQRVVEGIAAALGGPREEHRAEAVRLLATLVGAVVISRAVGTGSGLRAEVLD
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AVRKDTEIARLL
HHHHHHHHHHCC
>Mature Secondary Structure
MRKSREDTAESRRRILKEASRLYREKGFDGVSVADIMQAAGMTHGGFYRHFPSKEALIAE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHH
AMAEAFTDRTAPLTPQGDVSGTGLIRGYIEMYLSQSHLDRPGMGCPIASVGSEAGHVGGS
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHCCCH
VSEVFNTGIQRVVEGIAAALGGPREEHRAEAVRLLATLVGAVVISRAVGTGSGLRAEVLD
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AVRKDTEIARLL
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA