| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is proP [H]
Identifier: 158422655
GI number: 158422655
Start: 1157544
End: 1158809
Strand: Direct
Name: proP [H]
Synonym: AZC_1031
Alternate gene names: 158422655
Gene position: 1157544-1158809 (Clockwise)
Preceding gene: 158422654
Following gene: 158422656
Centisome position: 21.56
GC content: 68.88
Gene sequence:
>1266_bases GTGTCCGTCGCGATCGTCAGTGAGCGCCCCTCGGCCCGCCTCGTTGCCGGTGGCGCCATCGGCAACATGCTGGAGTGGTA CGATTTCGGCGTGTACGGCTTTCTGGCCTCGGTGTTCGCGCGCAACTTCTTTCCCGACAGCAGCGCCTTCATCGGCCTCC TGTCGGCCTTCGGCATGTTCGCCGCCTCCTTCCTGATGCGGCCGCTGGGTGGCATCCTCTTTGGCCGGGTGGGTGACCGG CTGGGGCGGCGGCGGGCGCTGTTCCTCTCCGCCATGATGATGACCCTCTCCACGGTGAGCATCGGCCTGCTGCCGACCGC CGCCAGCGCGGGGGCGATGGCCCCTGTCCTCTTGCTGGCGCTGCGCCTGTTGCAGGGCATTTCCGTGGGCGGCGAGCAGG CGGCGGCGGTGGTGTTTCTGTCCGAGGCGGCGCCACCCCGGCGGCGCGGGCTGCTCGCCTCCCTTTCCGTGGTGGGGGCG ACGCTCGGAACCCTGCTGGGCTCGGCCGTGGGCGCCTCGGTCGCCAGCCTGCTGCCCCCGCAGGACATGGCCGACTGGGG TTGGCGCGTGCCCTTCCTGCTGGGATTGGTGCTGGGCGGGGCGGCGCTGATCCTGCGCGCCGGCAAGGGCGAGCCCGAGC CAGATCGGACTGCCACGCCCAAGGCCCCCTTGCGGGAGGCTATGCGCGCGCATGGCCGCCAGATCCTCCACGCCATGCTG ATCGTGGTGGCGGAAGGCAATGTCTTCTATCTCGCCTTTGTCTTCCTCGCGACCTACATGCAGAAGGTGGACGGGCTGCC GCTCGCCAAATCCCTGCAGATGAGCGTGTTCGGCATGGTGGTGGTGCTCATCGCCAGCCCGGCGGCGGCCCTGCTGTCGG ACCGGATCGGCCGCAAGAAGGTGCTTCTGGCCGCGCTCGTCGGCCTCATCCTGTGTGCCTGGCCAGTGTTCCGATTGCTG AGTTCGGACAACCTGCCGCAGATGATCGCCGGGCAGGTCATCCTCGCCCTTCTCGCCTCCTGCTACGGCGGCCCCATGCC GGCGGCGCTGTGCGAACTCTTCCAACGCCGCACCCGCTGCACCGCATATGCCATCGCCTGGAATTGCGGTGTCGGCTGGG TCGGCGGGCTCACGCCGATGCTGACCATCTATCTCATGCACCGCTTCGACAGCCCCATGGCGCCGGCGGTGATGGTGATC GTCCTCTCCTGCGTCTCGCTGGCCGGCGTCCTTGCCATGACGGACAAATCGGTCGGCCCGATCTGA
Upstream 100 bases:
>100_bases TCGCCACGTTGTGCATGACCGACCGGACACGGCTCCCGCTGCCATGAGGTGGGACAAGGCTTCCGCCGATTTTGCGGATG ATGGATCCGGAGAGGGGGCC
Downstream 100 bases:
>100_bases TCCCTCCGCAGGGCGGCCGGGGACAAGATGGGCCGCCCCGTCTCGACGCGGCGGCCGAAAAGCTCTAGCACACGGGCAGA CATTCGATCCTCACGAACCG
Product: proline/betaine transporter 2
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MSVAIVSERPSARLVAGGAIGNMLEWYDFGVYGFLASVFARNFFPDSSAFIGLLSAFGMFAASFLMRPLGGILFGRVGDR LGRRRALFLSAMMMTLSTVSIGLLPTAASAGAMAPVLLLALRLLQGISVGGEQAAAVVFLSEAAPPRRRGLLASLSVVGA TLGTLLGSAVGASVASLLPPQDMADWGWRVPFLLGLVLGGAALILRAGKGEPEPDRTATPKAPLREAMRAHGRQILHAML IVVAEGNVFYLAFVFLATYMQKVDGLPLAKSLQMSVFGMVVVLIASPAAALLSDRIGRKKVLLAALVGLILCAWPVFRLL SSDNLPQMIAGQVILALLASCYGGPMPAALCELFQRRTRCTAYAIAWNCGVGWVGGLTPMLTIYLMHRFDSPMAPAVMVI VLSCVSLAGVLAMTDKSVGPI
Sequences:
>Translated_421_residues MSVAIVSERPSARLVAGGAIGNMLEWYDFGVYGFLASVFARNFFPDSSAFIGLLSAFGMFAASFLMRPLGGILFGRVGDR LGRRRALFLSAMMMTLSTVSIGLLPTAASAGAMAPVLLLALRLLQGISVGGEQAAAVVFLSEAAPPRRRGLLASLSVVGA TLGTLLGSAVGASVASLLPPQDMADWGWRVPFLLGLVLGGAALILRAGKGEPEPDRTATPKAPLREAMRAHGRQILHAML IVVAEGNVFYLAFVFLATYMQKVDGLPLAKSLQMSVFGMVVVLIASPAAALLSDRIGRKKVLLAALVGLILCAWPVFRLL SSDNLPQMIAGQVILALLASCYGGPMPAALCELFQRRTRCTAYAIAWNCGVGWVGGLTPMLTIYLMHRFDSPMAPAVMVI VLSCVSLAGVLAMTDKSVGPI >Mature_420_residues SVAIVSERPSARLVAGGAIGNMLEWYDFGVYGFLASVFARNFFPDSSAFIGLLSAFGMFAASFLMRPLGGILFGRVGDRL GRRRALFLSAMMMTLSTVSIGLLPTAASAGAMAPVLLLALRLLQGISVGGEQAAAVVFLSEAAPPRRRGLLASLSVVGAT LGTLLGSAVGASVASLLPPQDMADWGWRVPFLLGLVLGGAALILRAGKGEPEPDRTATPKAPLREAMRAHGRQILHAMLI VVAEGNVFYLAFVFLATYMQKVDGLPLAKSLQMSVFGMVVVLIASPAAALLSDRIGRKKVLLAALVGLILCAWPVFRLLS SDNLPQMIAGQVILALLASCYGGPMPAALCELFQRRTRCTAYAIAWNCGVGWVGGLTPMLTIYLMHRFDSPMAPAVMVIV LSCVSLAGVLAMTDKSVGPI
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=434, Percent_Identity=32.0276497695853, Blast_Score=244, Evalue=8e-66, Organism=Escherichia coli, GI1788292, Length=439, Percent_Identity=30.5239179954442, Blast_Score=195, Evalue=4e-51, Organism=Escherichia coli, GI1788942, Length=352, Percent_Identity=32.9545454545455, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1789941, Length=368, Percent_Identity=32.3369565217391, Blast_Score=148, Evalue=6e-37, Organism=Escherichia coli, GI87082231, Length=249, Percent_Identity=24.0963855421687, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87082404, Length=336, Percent_Identity=23.2142857142857, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 44252; Mature: 44120
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVAIVSERPSARLVAGGAIGNMLEWYDFGVYGFLASVFARNFFPDSSAFIGLLSAFGMF CCEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AASFLMRPLGGILFGRVGDRLGRRRALFLSAMMMTLSTVSIGLLPTAASAGAMAPVLLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LRLLQGISVGGEQAAAVVFLSEAAPPRRRGLLASLSVVGATLGTLLGSAVGASVASLLPP HHHHHCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QDMADWGWRVPFLLGLVLGGAALILRAGKGEPEPDRTATPKAPLREAMRAHGRQILHAML CCHHHCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH IVVAEGNVFYLAFVFLATYMQKVDGLPLAKSLQMSVFGMVVVLIASPAAALLSDRIGRKK HHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHH VLLAALVGLILCAWPVFRLLSSDNLPQMIAGQVILALLASCYGGPMPAALCELFQRRTRC HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH TAYAIAWNCGVGWVGGLTPMLTIYLMHRFDSPMAPAVMVIVLSCVSLAGVLAMTDKSVGP HHEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC I C >Mature Secondary Structure SVAIVSERPSARLVAGGAIGNMLEWYDFGVYGFLASVFARNFFPDSSAFIGLLSAFGMF CEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AASFLMRPLGGILFGRVGDRLGRRRALFLSAMMMTLSTVSIGLLPTAASAGAMAPVLLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LRLLQGISVGGEQAAAVVFLSEAAPPRRRGLLASLSVVGATLGTLLGSAVGASVASLLPP HHHHHCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QDMADWGWRVPFLLGLVLGGAALILRAGKGEPEPDRTATPKAPLREAMRAHGRQILHAML CCHHHCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH IVVAEGNVFYLAFVFLATYMQKVDGLPLAKSLQMSVFGMVVVLIASPAAALLSDRIGRKK HHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHH VLLAALVGLILCAWPVFRLLSSDNLPQMIAGQVILALLASCYGGPMPAALCELFQRRTRC HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH TAYAIAWNCGVGWVGGLTPMLTIYLMHRFDSPMAPAVMVIVLSCVSLAGVLAMTDKSVGP HHEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]