| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is folC [H]
Identifier: 158422649
GI number: 158422649
Start: 1149505
End: 1150812
Strand: Direct
Name: folC [H]
Synonym: AZC_1025
Alternate gene names: 158422649
Gene position: 1149505-1150812 (Clockwise)
Preceding gene: 158422648
Following gene: 158422650
Centisome position: 21.41
GC content: 72.78
Gene sequence:
>1308_bases GTGAGCCCACTCGGCGCGCTGCTGGAGCGCCTCGCGGCGCTCCACCCCAAGAAGATCGACCTGTCGCTGGAGCGCATGGA GCGCCTGGCGGCGGCGCTCGGCAATCCCGAGCGCCGGCTGCCGCCCGTCGTCCATGTGGCGGGCACCAACGGCAAGGGCT CCACCGTCGCCTACCTGCGCGCCGCGCTGGAGGCGGCCGGACGGCGCGTCCACACCTACACCTCGCCACACCTCGTGCGC TTCAACGAGCGCATCCGCCTCGCCGGTGAACTGGTGGACGATGCGCGGCTGTGCGATGCGCTGGAGCGCGTGGCGGCGGC CAATGACGGTGGCCCGATCACCTTCTTCGAAGTGACGACGGCGGCCGCCTTCCTCCTGTTCGCGGAGACCCCGGCGGACG TGCTGCTGCTGGAGGTGGGCCTCGGCGGCCGCCTCGACGCGACTAACATCATCGAGGCGCCGGTCGCGAGCGTCATCACG CCCATCTCCATCGACCATGTGGAATTCCTCGGCGATACGCTGGAAGCCATTGCCGGTGAGAAGGCGGGCATCATCAAGCC GCGCGTGCCGGTGATCGTGGGCGAGCAGCCGGACGAGGCGCTGGCGGTGATCGAGCGCACCGCCGCCCGCCGCCGGGCAC CGCTGTTCGCGCGCGGCCAGCAGTGGACGGTGCAGGAGGAGGCGGGCCGCCTCGTCTATTCCGACGAGGATGGACTGCTG GACCTGCCGCGCCCGCGTCTCATGGGGCCGCACCAGTTCGACAATGCCGGCCTTGCGGTGGCCACGCTGCGGGCCGTGCC CGAGTTGCGCGTGCCGCCGCCGGCGCTTGAGGCCGGCATCCGGGGCGCCGACTGGCCCGCCCGTCTCCAGCGCCTGCCCG TCGGGCCGCTGGTCGCCCGCGCGCCACGCGAGGCGGAGGTCTGGCTCGACGGCGGCCACAATGCCGGCGGCGGTCAGGCG CTGGCCCATGCGCTGGCGGAACTGGAAGAGCGCGTGCCCCGGCCGCTGGTGCTGGTGGTCGGCATGCTGGCCAACAAGGA CGTGTCCGGTTTCCTCGGCGCCTTTGCAGGACTCGCCCGCGAGGCCATCTGCGTACCGGTGCCGCCGGAACACAACGGCA CGGCGCCGGACGACCTCGCACGCATCGCCGCCGGGCTCGGCTTTTCCGCTTCCACGGCGGGCGATGTGGGCGCGGCGCTG GACGGCCTTGCGCGCTATCCGCTGACGCCGCCACCCCGCGTCCTCGTCTGCGGCTCGCTCTATCTCGCCGGGACGGTGCT CGCCGCCAACGAGACGCTGCCGAACTGA
Upstream 100 bases:
>100_bases ACCGCCACCAGATGCGCGAGACGCTGGCCCGCGTCTGTCGTCTCATGATGAAGGCGCCCGGCGTGCCCCCCAAGGGCCGT CTTCCGGCCCCCGCCGCCGC
Downstream 100 bases:
>100_bases TTATCTCGACAGGCCAGATGGATAGGGCCGGGTCGTCCGAGCGGCGCCCAACGGCGGTTGCAGATTCTCGCAATGCGCAA GCCTCGCGCAACCCATGTCT
Product: folylpolyglutamate synthetase
Products: NA
Alternate protein names: Folylpolyglutamate synthase; Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolylpolyglutamate synthase; Tetrahydrofolate synthase; Dihydrofolate synthase [H]
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSPLGALLERLAALHPKKIDLSLERMERLAAALGNPERRLPPVVHVAGTNGKGSTVAYLRAALEAAGRRVHTYTSPHLVR FNERIRLAGELVDDARLCDALERVAAANDGGPITFFEVTTAAAFLLFAETPADVLLLEVGLGGRLDATNIIEAPVASVIT PISIDHVEFLGDTLEAIAGEKAGIIKPRVPVIVGEQPDEALAVIERTAARRRAPLFARGQQWTVQEEAGRLVYSDEDGLL DLPRPRLMGPHQFDNAGLAVATLRAVPELRVPPPALEAGIRGADWPARLQRLPVGPLVARAPREAEVWLDGGHNAGGGQA LAHALAELEERVPRPLVLVVGMLANKDVSGFLGAFAGLAREAICVPVPPEHNGTAPDDLARIAAGLGFSASTAGDVGAAL DGLARYPLTPPPRVLVCGSLYLAGTVLAANETLPN
Sequences:
>Translated_435_residues MSPLGALLERLAALHPKKIDLSLERMERLAAALGNPERRLPPVVHVAGTNGKGSTVAYLRAALEAAGRRVHTYTSPHLVR FNERIRLAGELVDDARLCDALERVAAANDGGPITFFEVTTAAAFLLFAETPADVLLLEVGLGGRLDATNIIEAPVASVIT PISIDHVEFLGDTLEAIAGEKAGIIKPRVPVIVGEQPDEALAVIERTAARRRAPLFARGQQWTVQEEAGRLVYSDEDGLL DLPRPRLMGPHQFDNAGLAVATLRAVPELRVPPPALEAGIRGADWPARLQRLPVGPLVARAPREAEVWLDGGHNAGGGQA LAHALAELEERVPRPLVLVVGMLANKDVSGFLGAFAGLAREAICVPVPPEHNGTAPDDLARIAAGLGFSASTAGDVGAAL DGLARYPLTPPPRVLVCGSLYLAGTVLAANETLPN >Mature_434_residues SPLGALLERLAALHPKKIDLSLERMERLAAALGNPERRLPPVVHVAGTNGKGSTVAYLRAALEAAGRRVHTYTSPHLVRF NERIRLAGELVDDARLCDALERVAAANDGGPITFFEVTTAAAFLLFAETPADVLLLEVGLGGRLDATNIIEAPVASVITP ISIDHVEFLGDTLEAIAGEKAGIIKPRVPVIVGEQPDEALAVIERTAARRRAPLFARGQQWTVQEEAGRLVYSDEDGLLD LPRPRLMGPHQFDNAGLAVATLRAVPELRVPPPALEAGIRGADWPARLQRLPVGPLVARAPREAEVWLDGGHNAGGGQAL AHALAELEERVPRPLVLVVGMLANKDVSGFLGAFAGLAREAICVPVPPEHNGTAPDDLARIAAGLGFSASTAGDVGAALD GLARYPLTPPPRVLVCGSLYLAGTVLAANETLPN
Specific function: Conversion of folates to polyglutamate derivatives [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932990, Length=325, Percent_Identity=30.7692307692308, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI66932984, Length=325, Percent_Identity=30.7692307692308, Blast_Score=140, Evalue=3e-33, Organism=Escherichia coli, GI1788654, Length=427, Percent_Identity=35.5971896955504, Blast_Score=206, Evalue=3e-54, Organism=Caenorhabditis elegans, GI71984923, Length=307, Percent_Identity=30.2931596091205, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17553148, Length=307, Percent_Identity=30.2931596091205, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17553150, Length=307, Percent_Identity=30.6188925081433, Blast_Score=132, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6323760, Length=425, Percent_Identity=30.3529411764706, Blast_Score=169, Evalue=8e-43, Organism=Saccharomyces cerevisiae, GI6324815, Length=337, Percent_Identity=27.299703264095, Blast_Score=116, Evalue=7e-27, Organism=Drosophila melanogaster, GI24641571, Length=179, Percent_Identity=36.3128491620112, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24581568, Length=205, Percent_Identity=31.219512195122, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17; =6.3.2.12 [H]
Molecular weight: Translated: 45817; Mature: 45686
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS01012 FOLYLPOLYGLU_SYNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLGALLERLAALHPKKIDLSLERMERLAAALGNPERRLPPVVHVAGTNGKGSTVAYLR CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHCCCCEEEEECCCCCCCHHHHHH AALEAAGRRVHTYTSPHLVRFNERIRLAGELVDDARLCDALERVAAANDGGPITFFEVTT HHHHHCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHH AAAFLLFAETPADVLLLEVGLGGRLDATNIIEAPVASVITPISIDHVEFLGDTLEAIAGE HHHHHHEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC KAGIIKPRVPVIVGEQPDEALAVIERTAARRRAPLFARGQQWTVQEEAGRLVYSDEDGLL CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCEECCCCEEEHHHCCCEEEECCCCCE DLPRPRLMGPHQFDNAGLAVATLRAVPELRVPPPALEAGIRGADWPARLQRLPVGPLVAR ECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHCCCCHHHHC APREAEVWLDGGHNAGGGQALAHALAELEERVPRPLVLVVGMLANKDVSGFLGAFAGLAR CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH EAICVPVPPEHNGTAPDDLARIAAGLGFSASTAGDVGAALDGLARYPLTPPPRVLVCGSL CCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCH YLAGTVLAANETLPN HHHHEEEECCCCCCC >Mature Secondary Structure SPLGALLERLAALHPKKIDLSLERMERLAAALGNPERRLPPVVHVAGTNGKGSTVAYLR CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHCCCCEEEEECCCCCCCHHHHHH AALEAAGRRVHTYTSPHLVRFNERIRLAGELVDDARLCDALERVAAANDGGPITFFEVTT HHHHHCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHH AAAFLLFAETPADVLLLEVGLGGRLDATNIIEAPVASVITPISIDHVEFLGDTLEAIAGE HHHHHHEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC KAGIIKPRVPVIVGEQPDEALAVIERTAARRRAPLFARGQQWTVQEEAGRLVYSDEDGLL CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCEECCCCEEEHHHCCCEEEECCCCCE DLPRPRLMGPHQFDNAGLAVATLRAVPELRVPPPALEAGIRGADWPARLQRLPVGPLVAR ECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHCCCCHHHHC APREAEVWLDGGHNAGGGQALAHALAELEERVPRPLVLVVGMLANKDVSGFLGAFAGLAR CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH EAICVPVPPEHNGTAPDDLARIAAGLGFSASTAGDVGAALDGLARYPLTPPPRVLVCGSL CCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCH YLAGTVLAANETLPN HHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3040739; 3040734; 9205837; 9278503; 1989505 [H]